File size: 6,260 Bytes
7885a28 |
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 |
"""Unsupervised nearest neighbors learner"""
# Authors: The scikit-learn developers
# SPDX-License-Identifier: BSD-3-Clause
from ..base import _fit_context
from ._base import KNeighborsMixin, NeighborsBase, RadiusNeighborsMixin
class NearestNeighbors(KNeighborsMixin, RadiusNeighborsMixin, NeighborsBase):
"""Unsupervised learner for implementing neighbor searches.
Read more in the :ref:`User Guide <unsupervised_neighbors>`.
.. versionadded:: 0.9
Parameters
----------
n_neighbors : int, default=5
Number of neighbors to use by default for :meth:`kneighbors` queries.
radius : float, default=1.0
Range of parameter space to use by default for :meth:`radius_neighbors`
queries.
algorithm : {'auto', 'ball_tree', 'kd_tree', 'brute'}, default='auto'
Algorithm used to compute the nearest neighbors:
- 'ball_tree' will use :class:`BallTree`
- 'kd_tree' will use :class:`KDTree`
- 'brute' will use a brute-force search.
- 'auto' will attempt to decide the most appropriate algorithm
based on the values passed to :meth:`fit` method.
Note: fitting on sparse input will override the setting of
this parameter, using brute force.
leaf_size : int, default=30
Leaf size passed to BallTree or KDTree. This can affect the
speed of the construction and query, as well as the memory
required to store the tree. The optimal value depends on the
nature of the problem.
metric : str or callable, default='minkowski'
Metric to use for distance computation. Default is "minkowski", which
results in the standard Euclidean distance when p = 2. See the
documentation of `scipy.spatial.distance
<https://docs.scipy.org/doc/scipy/reference/spatial.distance.html>`_ and
the metrics listed in
:class:`~sklearn.metrics.pairwise.distance_metrics` for valid metric
values.
If metric is "precomputed", X is assumed to be a distance matrix and
must be square during fit. X may be a :term:`sparse graph`, in which
case only "nonzero" elements may be considered neighbors.
If metric is a callable function, it takes two arrays representing 1D
vectors as inputs and must return one value indicating the distance
between those vectors. This works for Scipy's metrics, but is less
efficient than passing the metric name as a string.
p : float (positive), default=2
Parameter for the Minkowski metric from
sklearn.metrics.pairwise.pairwise_distances. When p = 1, this is
equivalent to using manhattan_distance (l1), and euclidean_distance
(l2) for p = 2. For arbitrary p, minkowski_distance (l_p) is used.
metric_params : dict, default=None
Additional keyword arguments for the metric function.
n_jobs : int, default=None
The number of parallel jobs to run for neighbors search.
``None`` means 1 unless in a :obj:`joblib.parallel_backend` context.
``-1`` means using all processors. See :term:`Glossary <n_jobs>`
for more details.
Attributes
----------
effective_metric_ : str
Metric used to compute distances to neighbors.
effective_metric_params_ : dict
Parameters for the metric used to compute distances to neighbors.
n_features_in_ : int
Number of features seen during :term:`fit`.
.. versionadded:: 0.24
feature_names_in_ : ndarray of shape (`n_features_in_`,)
Names of features seen during :term:`fit`. Defined only when `X`
has feature names that are all strings.
.. versionadded:: 1.0
n_samples_fit_ : int
Number of samples in the fitted data.
See Also
--------
KNeighborsClassifier : Classifier implementing the k-nearest neighbors
vote.
RadiusNeighborsClassifier : Classifier implementing a vote among neighbors
within a given radius.
KNeighborsRegressor : Regression based on k-nearest neighbors.
RadiusNeighborsRegressor : Regression based on neighbors within a fixed
radius.
BallTree : Space partitioning data structure for organizing points in a
multi-dimensional space, used for nearest neighbor search.
Notes
-----
See :ref:`Nearest Neighbors <neighbors>` in the online documentation
for a discussion of the choice of ``algorithm`` and ``leaf_size``.
https://en.wikipedia.org/wiki/K-nearest_neighbors_algorithm
Examples
--------
>>> import numpy as np
>>> from sklearn.neighbors import NearestNeighbors
>>> samples = [[0, 0, 2], [1, 0, 0], [0, 0, 1]]
>>> neigh = NearestNeighbors(n_neighbors=2, radius=0.4)
>>> neigh.fit(samples)
NearestNeighbors(...)
>>> neigh.kneighbors([[0, 0, 1.3]], 2, return_distance=False)
array([[2, 0]]...)
>>> nbrs = neigh.radius_neighbors(
... [[0, 0, 1.3]], 0.4, return_distance=False
... )
>>> np.asarray(nbrs[0][0])
array(2)
"""
def __init__(
self,
*,
n_neighbors=5,
radius=1.0,
algorithm="auto",
leaf_size=30,
metric="minkowski",
p=2,
metric_params=None,
n_jobs=None,
):
super().__init__(
n_neighbors=n_neighbors,
radius=radius,
algorithm=algorithm,
leaf_size=leaf_size,
metric=metric,
p=p,
metric_params=metric_params,
n_jobs=n_jobs,
)
@_fit_context(
# NearestNeighbors.metric is not validated yet
prefer_skip_nested_validation=False
)
def fit(self, X, y=None):
"""Fit the nearest neighbors estimator from the training dataset.
Parameters
----------
X : {array-like, sparse matrix} of shape (n_samples, n_features) or \
(n_samples, n_samples) if metric='precomputed'
Training data.
y : Ignored
Not used, present for API consistency by convention.
Returns
-------
self : NearestNeighbors
The fitted nearest neighbors estimator.
"""
return self._fit(X)
|