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fairseq/examples/data2vec/config/vision/finetuning/run_config/slurm_1_aws.yaml

@@ -0,0 +1,36 @@
+# @package _global_
+
+hydra:
+  job:
+    config:
+      override_dirname:
+        kv_sep: ':'
+        item_sep: '/'
+        exclude_keys:
+          - run_config
+          - distributed_training.distributed_port
+          - distributed_training.distributed_world_size
+          - model.pretrained_model_path
+          - model.target_network_path
+          - next_script
+          - task.cache_in_scratch
+          - task.data
+          - checkpoint.save_interval_updates
+          - checkpoint.keep_interval_updates
+          - checkpoint.save_on_overflow
+          - common.log_interval
+          - common.user_dir
+  sweep:
+    dir: /checkpoint/${env:USER}/${env:PREFIX}/${hydra.job.config_name}_${hydra.launcher.gpus_per_node}/${hydra.job.override_dirname}
+    subdir: ''
+  launcher:
+    submitit_folder: ${hydra.sweep.dir}
+    timeout_min: 4320
+    cpus_per_task: 80
+    gpus_per_node: 8
+    tasks_per_node: 1
+    mem_gb: 0
+    nodes: 1
+    name: ${env:PREFIX}_${hydra.job.config_name}
+    partition: wav2vec,learnlab,learnfair
+    max_num_timeout: 30

fairseq/examples/data2vec/config/vision/finetuning/run_config/slurm_2.yaml

@@ -0,0 +1,38 @@
+# @package _global_
+
+hydra:
+  job:
+    config:
+      override_dirname:
+        kv_sep: ':'
+        item_sep: '/'
+        exclude_keys:
+          - run_config
+          - distributed_training.distributed_port
+          - distributed_training.distributed_world_size
+          - model.pretrained_model_path
+          - model.target_network_path
+          - next_script
+          - task.cache_in_scratch
+          - task.data
+          - checkpoint.save_interval_updates
+          - checkpoint.keep_interval_updates
+          - checkpoint.save_on_overflow
+          - common.log_interval
+          - common.user_dir
+          - task.local_cache_path
+  sweep:
+    dir: /checkpoint/${env:USER}/${env:PREFIX}/${hydra.job.config_name}_${hydra.launcher.gpus_per_node}/${hydra.job.override_dirname}
+    subdir: ''
+  launcher:
+    submitit_folder: ${hydra.sweep.dir}
+    timeout_min: 4320
+    cpus_per_task: 10
+    gpus_per_node: 8
+    tasks_per_node: 8
+    mem_gb: 450
+    nodes: 2
+    name: ${env:PREFIX}_${hydra.job.config_name}
+    partition: devlab,learnlab,learnfair,scavenge
+    constraint: volta32gb,ib4
+    max_num_timeout: 30

fairseq/examples/data2vec/config/vision/finetuning/run_config/slurm_2_aws.yaml

@@ -0,0 +1,38 @@
+# @package _global_
+
+hydra:
+  job:
+    config:
+      override_dirname:
+        kv_sep: ':'
+        item_sep: '/'
+        exclude_keys:
+          - run_config
+          - distributed_training.distributed_port
+          - distributed_training.distributed_world_size
+          - model.pretrained_model_path
+          - model.target_network_path
+          - next_script
+          - task.cache_in_scratch
+          - task.data
+          - checkpoint.save_interval_updates
+          - checkpoint.keep_interval_updates
+          - checkpoint.save_on_overflow
+          - common.log_interval
+          - common.user_dir
+          - task.local_cache_path
+          - model.model_path
+  sweep:
+    dir: /fsx-wav2vec/${env:USER}/${env:PREFIX}/${hydra.job.config_name}_${hydra.launcher.gpus_per_node}/${hydra.job.override_dirname}
+    subdir: ''
+  launcher:
+    submitit_folder: ${hydra.sweep.dir}
+    timeout_min: 4320
+    cpus_per_task: 10
+    gpus_per_node: 8
+    tasks_per_node: 8
+    mem_gb: 0
+    nodes: 2
+    name: ${env:PREFIX}_${hydra.job.config_name}
+    partition: wav2vec,learnlab,learnfair
+    max_num_timeout: 30

fairseq/examples/data2vec/config/vision/finetuning/run_config/slurm_3.yaml

@@ -0,0 +1,36 @@
+# @package _global_
+
+hydra:
+  job:
+    config:
+      override_dirname:
+        kv_sep: ':'
+        item_sep: '/'
+        exclude_keys:
+          - run_config
+          - distributed_training.distributed_port
+          - distributed_training.distributed_world_size
+          - model.pretrained_model_path
+          - model.target_network_path
+          - next_script
+          - task.cache_in_scratch
+          - task.data
+          - checkpoint.save_interval_updates
+          - checkpoint.keep_interval_updates
+          - checkpoint.save_on_overflow
+          - common.log_interval
+  sweep:
+    dir: /checkpoint/${env:USER}/${env:PREFIX}/${hydra.job.config_name}_${hydra.launcher.gpus_per_node}/${hydra.job.override_dirname}
+    subdir: ''
+  launcher:
+    submitit_folder: ${hydra.sweep.dir}
+    timeout_min: 4320
+    cpus_per_task: 80
+    gpus_per_node: 8
+    tasks_per_node: 1
+    mem_gb: 450
+    nodes: 3
+    name: ${env:PREFIX}_${hydra.job.config_name}
+    partition: devlab,learnlab,learnfair,scavenge
+    constraint: volta32gb,ib4
+    max_num_timeout: 30

fairseq/examples/data2vec/config/vision/finetuning/run_config/slurm_4_aws.yaml

@@ -0,0 +1,36 @@
+# @package _global_
+
+hydra:
+  job:
+    config:
+      override_dirname:
+        kv_sep: ':'
+        item_sep: '/'
+        exclude_keys:
+          - run_config
+          - distributed_training.distributed_port
+          - distributed_training.distributed_world_size
+          - model.pretrained_model_path
+          - model.target_network_path
+          - next_script
+          - task.cache_in_scratch
+          - task.data
+          - checkpoint.save_interval_updates
+          - checkpoint.keep_interval_updates
+          - checkpoint.save_on_overflow
+          - common.log_interval
+          - common.user_dir
+  sweep:
+    dir: /checkpoint/${env:USER}/${env:PREFIX}/${hydra.job.config_name}_${hydra.launcher.gpus_per_node}/${hydra.job.override_dirname}
+    subdir: ''
+  launcher:
+    submitit_folder: ${hydra.sweep.dir}
+    timeout_min: 4320
+    cpus_per_task: 10
+    gpus_per_node: 8
+    tasks_per_node: 8
+    mem_gb: 0
+    nodes: 4
+    name: ${env:PREFIX}_${hydra.job.config_name}
+    partition: wav2vec,learnlab,learnfair
+    max_num_timeout: 30

fairseq/examples/data2vec/config/vision/finetuning/run_config/slurm_6_aws.yaml

@@ -0,0 +1,36 @@
+# @package _global_
+
+hydra:
+  job:
+    config:
+      override_dirname:
+        kv_sep: ':'
+        item_sep: '/'
+        exclude_keys:
+          - run_config
+          - distributed_training.distributed_port
+          - distributed_training.distributed_world_size
+          - model.pretrained_model_path
+          - model.target_network_path
+          - next_script
+          - task.cache_in_scratch
+          - task.data
+          - checkpoint.save_interval_updates
+          - checkpoint.keep_interval_updates
+          - checkpoint.save_on_overflow
+          - common.log_interval
+          - common.user_dir
+  sweep:
+    dir: /checkpoint/${env:USER}/${env:PREFIX}/${hydra.job.config_name}_${hydra.launcher.gpus_per_node}/${hydra.job.override_dirname}
+    subdir: ''
+  launcher:
+    submitit_folder: ${hydra.sweep.dir}
+    timeout_min: 4320
+    cpus_per_task: 10
+    gpus_per_node: 8
+    tasks_per_node: 8
+    mem_gb: 0
+    nodes: 6
+    name: ${env:PREFIX}_${hydra.job.config_name}
+    partition: wav2vec,learnlab,learnfair
+    max_num_timeout: 30

fairseq/examples/data2vec/config/vision/finetuning/run_config/slurm_8_aws.yaml

@@ -0,0 +1,36 @@
+# @package _global_
+
+hydra:
+  job:
+    config:
+      override_dirname:
+        kv_sep: ':'
+        item_sep: '/'
+        exclude_keys:
+          - run_config
+          - distributed_training.distributed_port
+          - distributed_training.distributed_world_size
+          - model.pretrained_model_path
+          - model.target_network_path
+          - next_script
+          - task.cache_in_scratch
+          - task.data
+          - checkpoint.save_interval_updates
+          - checkpoint.keep_interval_updates
+          - checkpoint.save_on_overflow
+          - common.log_interval
+          - common.user_dir
+  sweep:
+    dir: /checkpoint/${env:USER}/${env:PREFIX}/${hydra.job.config_name}_${hydra.launcher.gpus_per_node}/${hydra.job.override_dirname}
+    subdir: ''
+  launcher:
+    submitit_folder: ${hydra.sweep.dir}
+    timeout_min: 4320
+    cpus_per_task: 10
+    gpus_per_node: 8
+    tasks_per_node: 8
+    mem_gb: 0
+    nodes: 8
+    name: ${env:PREFIX}_${hydra.job.config_name}
+    partition: wav2vec,learnlab,learnfair
+    max_num_timeout: 30

fairseq/examples/data2vec/config/vision/pretraining/base_imagenet_d2v1.yaml

@@ -0,0 +1,64 @@
+# @package _group_
+
+common:
+  fp16: true
+  log_format: json
+  log_interval: 200
+  tensorboard_logdir: tb
+
+checkpoint:
+  save_interval: 5
+  save_interval_updates: 25000
+  keep_interval_updates: 1
+  no_epoch_checkpoints: true
+
+task:
+  _name: image_pretraining
+  data: /datasets01/imagenet_full_size/061417
+
+dataset:
+  num_workers: 6
+  batch_size: 128
+  skip_invalid_size_inputs_valid_test: true
+  required_batch_size_multiple: 2
+  disable_validation: true
+
+distributed_training:
+  distributed_world_size: 16
+  ddp_backend: legacy_ddp
+
+criterion:
+  _name: model
+  log_keys:
+    - ema_decay
+    - target_var
+    - pred_var
+
+optimization:
+  max_update: 375300 #300*1251
+  lr: [0.0005]
+  clip_norm: 3.0
+
+optimizer:
+  _name: adam
+  adam_betas: (0.9,0.999)
+  adam_eps: 1e-08
+  weight_decay: 0.05
+
+lr_scheduler:
+  _name: cosine
+  warmup_updates: 12510 # it should be 10 epochs
+
+model:
+  _name: data2vec_vision
+
+  attention_dropout: 0.05
+
+  ema_decay: 0.999
+  ema_end_decay: 0.9998
+  layer_norm_targets: True
+  average_top_k_layers: 6
+
+  loss_beta: 2.0
+  
+  drop_path: 0.25

fairseq/examples/data2vec/config/vision/pretraining/run_config/local.yaml

@@ -0,0 +1,15 @@
+# @package _global_
+hydra:
+  sweep:
+    dir: ${env:PWD}/tmp_dbg/${now:%H-%M-%S}
+
+distributed_training:
+  distributed_world_size: 1
+  nprocs_per_node: 1
+  distributed_port: -1
+  
+common:
+  log_interval: 1
+  
+dataset:
+  num_workers: 0

fairseq/examples/data2vec/config/vision/pretraining/run_config/slurm_1.yaml

@@ -0,0 +1,37 @@
+# @package _global_
+
+hydra:
+  job:
+    config:
+      override_dirname:
+        kv_sep: ':'
+        item_sep: '/'
+        exclude_keys:
+          - run_config
+          - distributed_training.distributed_port
+          - distributed_training.distributed_world_size
+          - model.pretrained_model_path
+          - model.target_network_path
+          - next_script
+          - task.cache_in_scratch
+          - task.data
+          - checkpoint.save_interval_updates
+          - checkpoint.keep_interval_updates
+          - checkpoint.save_on_overflow
+          - common.log_interval
+          - common.user_dir
+  sweep:
+    dir: /checkpoint/${env:USER}/${env:PREFIX}/${hydra.job.config_name}_${hydra.launcher.gpus_per_node}/${hydra.job.override_dirname}
+    subdir: ''
+  launcher:
+    submitit_folder: ${hydra.sweep.dir}
+    timeout_min: 4320
+    cpus_per_task: 80
+    gpus_per_node: 8
+    tasks_per_node: 1
+    mem_gb: 450
+    nodes: 1
+    name: ${env:PREFIX}_${hydra.job.config_name}
+    partition: devlab,learnlab,learnfair,scavenge
+    constraint: volta32gb,ib4
+    max_num_timeout: 30

fairseq/examples/data2vec/config/vision/pretraining/run_config/slurm_2_aws.yaml

@@ -0,0 +1,37 @@
+# @package _global_
+
+hydra:
+  job:
+    config:
+      override_dirname:
+        kv_sep: ':'
+        item_sep: '/'
+        exclude_keys:
+          - run_config
+          - distributed_training.distributed_port
+          - distributed_training.distributed_world_size
+          - model.pretrained_model_path
+          - model.target_network_path
+          - next_script
+          - task.cache_in_scratch
+          - task.data
+          - checkpoint.save_interval_updates
+          - checkpoint.keep_interval_updates
+          - checkpoint.save_on_overflow
+          - common.log_interval
+          - common.user_dir
+          - task.local_cache_path
+  sweep:
+    dir: /fsx-wav2vec/${env:USER}/${env:PREFIX}/${hydra.job.config_name}_${hydra.launcher.gpus_per_node}/${hydra.job.override_dirname}
+    subdir: ''
+  launcher:
+    submitit_folder: ${hydra.sweep.dir}
+    timeout_min: 4320
+    cpus_per_task: 10
+    gpus_per_node: 8
+    tasks_per_node: 8
+    mem_gb: 0
+    nodes: 2
+    name: ${env:PREFIX}_${hydra.job.config_name}
+    partition: wav2vec,learnlab,learnfair
+    max_num_timeout: 30

fairseq/examples/data2vec/config/vision/pretraining/run_config/slurm_3.yaml

@@ -0,0 +1,36 @@
+# @package _global_
+
+hydra:
+  job:
+    config:
+      override_dirname:
+        kv_sep: ':'
+        item_sep: '/'
+        exclude_keys:
+          - run_config
+          - distributed_training.distributed_port
+          - distributed_training.distributed_world_size
+          - model.pretrained_model_path
+          - model.target_network_path
+          - next_script
+          - task.cache_in_scratch
+          - task.data
+          - checkpoint.save_interval_updates
+          - checkpoint.keep_interval_updates
+          - checkpoint.save_on_overflow
+          - common.log_interval
+  sweep:
+    dir: /checkpoint/${env:USER}/${env:PREFIX}/${hydra.job.config_name}_${hydra.launcher.gpus_per_node}/${hydra.job.override_dirname}
+    subdir: ''
+  launcher:
+    submitit_folder: ${hydra.sweep.dir}
+    timeout_min: 4320
+    cpus_per_task: 80
+    gpus_per_node: 8
+    tasks_per_node: 1
+    mem_gb: 450
+    nodes: 3
+    name: ${env:PREFIX}_${hydra.job.config_name}
+    partition: devlab,learnlab,learnfair,scavenge
+    constraint: volta32gb,ib4
+    max_num_timeout: 30

fairseq/examples/data2vec/config/vision/pretraining/run_config/slurm_4.yaml

@@ -0,0 +1,36 @@
+# @package _global_
+
+hydra:
+  job:
+    config:
+      override_dirname:
+        kv_sep: ':'
+        item_sep: '/'
+        exclude_keys:
+          - run_config
+          - distributed_training.distributed_port
+          - distributed_training.distributed_world_size
+          - model.pretrained_model_path
+          - model.target_network_path
+          - next_script
+          - task.cache_in_scratch
+          - task.data
+          - checkpoint.save_interval_updates
+          - checkpoint.keep_interval_updates
+          - checkpoint.save_on_overflow
+          - common.log_interval
+  sweep:
+    dir: /checkpoint/${env:USER}/${env:PREFIX}/${hydra.job.config_name}_${hydra.launcher.gpus_per_node}/${hydra.job.override_dirname}
+    subdir: ''
+  launcher:
+    submitit_folder: ${hydra.sweep.dir}
+    timeout_min: 4320
+    cpus_per_task: 10
+    gpus_per_node: 8
+    tasks_per_node: 8
+    mem_gb: 450
+    nodes: 4
+    name: ${env:PREFIX}_${hydra.job.config_name}
+    partition: devlab,learnlab,learnfair,scavenge
+    constraint: volta32gb,ib4
+    max_num_timeout: 30

fairseq/examples/data2vec/config/vision/pretraining/run_config/slurm_4_aws.yaml

@@ -0,0 +1,36 @@
+# @package _global_
+
+hydra:
+  job:
+    config:
+      override_dirname:
+        kv_sep: ':'
+        item_sep: '/'
+        exclude_keys:
+          - run_config
+          - distributed_training.distributed_port
+          - distributed_training.distributed_world_size
+          - model.pretrained_model_path
+          - model.target_network_path
+          - next_script
+          - task.cache_in_scratch
+          - task.data
+          - checkpoint.save_interval_updates
+          - checkpoint.keep_interval_updates
+          - checkpoint.save_on_overflow
+          - common.log_interval
+          - common.user_dir
+  sweep:
+    dir: /checkpoint/${env:USER}/${env:PREFIX}/${hydra.job.config_name}_${hydra.launcher.gpus_per_node}/${hydra.job.override_dirname}
+    subdir: ''
+  launcher:
+    submitit_folder: ${hydra.sweep.dir}
+    timeout_min: 4320
+    cpus_per_task: 10
+    gpus_per_node: 8
+    tasks_per_node: 8
+    mem_gb: 0
+    nodes: 4
+    name: ${env:PREFIX}_${hydra.job.config_name}
+    partition: wav2vec,learnlab,learnfair
+    max_num_timeout: 30

fairseq/examples/data2vec/config/vision/pretraining/run_config/slurm_6_aws.yaml

@@ -0,0 +1,36 @@
+# @package _global_
+
+hydra:
+  job:
+    config:
+      override_dirname:
+        kv_sep: ':'
+        item_sep: '/'
+        exclude_keys:
+          - run_config
+          - distributed_training.distributed_port
+          - distributed_training.distributed_world_size
+          - model.pretrained_model_path
+          - model.target_network_path
+          - next_script
+          - task.cache_in_scratch
+          - task.data
+          - checkpoint.save_interval_updates
+          - checkpoint.keep_interval_updates
+          - checkpoint.save_on_overflow
+          - common.log_interval
+          - common.user_dir
+  sweep:
+    dir: /checkpoint/${env:USER}/${env:PREFIX}/${hydra.job.config_name}_${hydra.launcher.gpus_per_node}/${hydra.job.override_dirname}
+    subdir: ''
+  launcher:
+    submitit_folder: ${hydra.sweep.dir}
+    timeout_min: 4320
+    cpus_per_task: 10
+    gpus_per_node: 8
+    tasks_per_node: 8
+    mem_gb: 0
+    nodes: 6
+    name: ${env:PREFIX}_${hydra.job.config_name}
+    partition: wav2vec,learnlab,learnfair
+    max_num_timeout: 30

fairseq/examples/data2vec/config/vision/pretraining/run_config/slurm_8_aws.yaml

@@ -0,0 +1,36 @@
+# @package _global_
+
+hydra:
+  job:
+    config:
+      override_dirname:
+        kv_sep: ':'
+        item_sep: '/'
+        exclude_keys:
+          - run_config
+          - distributed_training.distributed_port
+          - distributed_training.distributed_world_size
+          - model.pretrained_model_path
+          - model.target_network_path
+          - next_script
+          - task.cache_in_scratch
+          - task.data
+          - checkpoint.save_interval_updates
+          - checkpoint.keep_interval_updates
+          - checkpoint.save_on_overflow
+          - common.log_interval
+          - common.user_dir
+  sweep:
+    dir: /checkpoint/${env:USER}/${env:PREFIX}/${hydra.job.config_name}_${hydra.launcher.gpus_per_node}/${hydra.job.override_dirname}
+    subdir: ''
+  launcher:
+    submitit_folder: ${hydra.sweep.dir}
+    timeout_min: 4320
+    cpus_per_task: 10
+    gpus_per_node: 8
+    tasks_per_node: 8
+    mem_gb: 0
+    nodes: 8
+    name: ${env:PREFIX}_${hydra.job.config_name}
+    partition: wav2vec,learnlab,learnfair
+    max_num_timeout: 30

fairseq/examples/data2vec/data/__init__.py

@@ -0,0 +1,17 @@
+# Copyright (c) Facebook, Inc. and its affiliates.
+#
+# This source code is licensed under the MIT license found in the
+# LICENSE file in the root directory of this source tree.
+
+from .image_dataset import ImageDataset
+from .path_dataset import PathDataset
+from .mae_image_dataset import MaeImageDataset
+from .mae_finetuning_image_dataset import MaeFinetuningImageDataset
+
+
+__all__ = [
+    "ImageDataset",
+    "MaeImageDataset",
+    "MaeFinetuningImageDataset",
+    "PathDataset",
+]

fairseq/examples/data2vec/data/add_class_target_dataset.py

@@ -0,0 +1,63 @@
+# Copyright (c) Facebook, Inc. and its affiliates.
+#
+# This source code is licensed under the MIT license found in the
+# LICENSE file in the root directory of this source tree.
+
+import torch
+
+from fairseq.data import BaseWrapperDataset, data_utils
+
+
+class AddClassTargetDataset(BaseWrapperDataset):
+    def __init__(
+        self,
+        dataset,
+        labels,
+        multi_class,
+        num_classes=None,
+        label_indices=None,
+        add_to_input=True,
+    ):
+        super().__init__(dataset)
+
+        self.label_indices = label_indices
+        self.labels = labels
+        self.multi_class = multi_class
+        self.add_to_input = add_to_input
+        if num_classes is None and multi_class:
+            assert self.label_indices is not None
+            num_classes = len(self.label_indices)
+
+        self.num_classes = num_classes
+
+    def __getitem__(self, index):
+        item = self.dataset[index]
+        item_labels = self.labels[index]
+        if self.multi_class:
+            item["label"] = torch.zeros(self.num_classes)
+            for il in item_labels:
+                if self.label_indices is not None:
+                    il = self.label_indices[il]
+                item["label"][il] = 1.0
+        else:
+            item["label"] = torch.tensor(
+                self.labels[index]
+                if self.label_indices is None
+                else self.label_indices[self.labels[index]]
+            )
+
+        return item
+
+    def collater(self, samples):
+        collated = self.dataset.collater(samples)
+        if len(collated) == 0:
+            return collated
+
+        indices = set(collated["id"].tolist())
+        target = [s["label"] for s in samples if s["id"] in indices]
+        collated["label"] = torch.stack(target, dim=0)
+
+        if self.add_to_input:
+            collated["net_input"]["label"] = collated["label"]
+
+        return collated

fairseq/examples/data2vec/data/image_dataset.py

@@ -0,0 +1,127 @@
+# Copyright (c) Facebook, Inc. and its affiliates.
+#
+# This source code is licensed under the MIT license found in the
+# LICENSE file in the root directory of this source tree.
+
+
+import logging
+
+import numpy as np
+import os
+from typing import Optional, Callable, Set
+
+import torch
+
+from torchvision.datasets.vision import VisionDataset
+from torchvision.transforms import ToTensor
+
+from fairseq.data import FairseqDataset
+
+
+logger = logging.getLogger(__name__)
+
+
+class ImageDataset(FairseqDataset, VisionDataset):
+    def __init__(
+        self,
+        root: str,
+        extensions: Set[str],
+        load_classes: bool,
+        transform: Optional[Callable] = None,
+        shuffle=True,
+    ):
+        FairseqDataset.__init__(self)
+        VisionDataset.__init__(self, root=root, transform=transform)
+
+        self.shuffle = shuffle
+        self.tensor_transform = ToTensor()
+
+        self.classes = None
+        self.labels = None
+        if load_classes:
+            classes = [d.name for d in os.scandir(root) if d.is_dir()]
+            classes.sort()
+            self.classes = {cls_name: i for i, cls_name in enumerate(classes)}
+            logger.info(f"loaded {len(self.classes)} classes")
+            self.labels = []
+
+        def walk_path(root_path):
+            for root, _, fnames in sorted(os.walk(root_path, followlinks=True)):
+                for fname in sorted(fnames):
+                    fname_ext = os.path.splitext(fname)
+                    if fname_ext[-1].lower() not in extensions:
+                        continue
+
+                    path = os.path.join(root, fname)
+                    yield path
+
+        logger.info(f"finding images in {root}")
+        if self.classes is not None:
+            self.files = []
+            self.labels = []
+            for c, i in self.classes.items():
+                for f in walk_path(os.path.join(root, c)):
+                    self.files.append(f)
+                    self.labels.append(i)
+        else:
+            self.files = [f for f in walk_path(root)]
+
+        logger.info(f"loaded {len(self.files)} examples")
+
+    def __getitem__(self, index):
+        from PIL import Image
+
+        fpath = self.files[index]
+
+        with open(fpath, "rb") as f:
+            img = Image.open(f).convert("RGB")
+
+        if self.transform is None:
+            img = self.tensor_transform(img)
+        else:
+            img = self.transform(img)
+            assert torch.is_tensor(img)
+
+        res = {"id": index, "img": img}
+
+        if self.labels is not None:
+            res["label"] = self.labels[index]
+
+        return res
+
+    def __len__(self):
+        return len(self.files)
+
+    def collater(self, samples):
+        if len(samples) == 0:
+            return {}
+
+        collated_img = torch.stack([s["img"] for s in samples], dim=0)
+
+        res = {
+            "id": torch.LongTensor([s["id"] for s in samples]),
+            "net_input": {
+                "img": collated_img,
+            },
+        }
+
+        if "label" in samples[0]:
+            res["net_input"]["label"] = torch.LongTensor([s["label"] for s in samples])
+
+        return res
+
+    def num_tokens(self, index):
+        return 1
+
+    def size(self, index):
+        return 1
+
+    def ordered_indices(self):
+        """Return an ordered list of indices. Batches will be constructed based
+        on this order."""
+        if self.shuffle:
+            order = [np.random.permutation(len(self))]
+        else:
+            order = [np.arange(len(self))]
+
+        return order[0]

fairseq/examples/data2vec/data/mae_finetuning_image_dataset.py

@@ -0,0 +1,135 @@
+# Copyright (c) Facebook, Inc. and its affiliates.
+#
+# This source code is licensed under the MIT license found in the
+# LICENSE file in the root directory of this source tree.
+
+
+import logging
+
+import numpy as np
+import os
+
+import torch
+
+from torchvision import datasets, transforms
+
+from timm.data import create_transform
+from timm.data.constants import IMAGENET_DEFAULT_MEAN, IMAGENET_DEFAULT_STD
+import PIL
+
+from fairseq.data import FairseqDataset
+from .mae_image_dataset import caching_loader
+
+
+logger = logging.getLogger(__name__)
+
+
+def build_transform(is_train, input_size, color_jitter, aa, reprob, remode, recount):
+    mean = IMAGENET_DEFAULT_MEAN
+    std = IMAGENET_DEFAULT_STD
+    # train transform
+    if is_train:
+        # this should always dispatch to transforms_imagenet_train
+        transform = create_transform(
+            input_size=input_size,
+            is_training=True,
+            color_jitter=color_jitter,
+            auto_augment=aa,
+            interpolation="bicubic",
+            re_prob=reprob,
+            re_mode=remode,
+            re_count=recount,
+            mean=mean,
+            std=std,
+        )
+        return transform
+
+    # eval transform
+    t = []
+    if input_size <= 224:
+        crop_pct = 224 / 256
+    else:
+        crop_pct = 1.0
+    size = int(input_size / crop_pct)
+    t.append(
+        transforms.Resize(
+            size, interpolation=PIL.Image.BICUBIC
+        ),  # to maintain same ratio w.r.t. 224 images
+    )
+    t.append(transforms.CenterCrop(input_size))
+
+    t.append(transforms.ToTensor())
+    t.append(transforms.Normalize(mean, std))
+    return transforms.Compose(t)
+
+
+class MaeFinetuningImageDataset(FairseqDataset):
+    def __init__(
+        self,
+        root: str,
+        split: str,
+        is_train: bool,
+        input_size,
+        color_jitter=None,
+        aa="rand-m9-mstd0.5-inc1",
+        reprob=0.25,
+        remode="pixel",
+        recount=1,
+        local_cache_path=None,
+        shuffle=True,
+    ):
+        FairseqDataset.__init__(self)
+
+        self.shuffle = shuffle
+
+        transform = build_transform(
+            is_train, input_size, color_jitter, aa, reprob, remode, recount
+        )
+
+        path = os.path.join(root, split)
+        loader = caching_loader(local_cache_path, datasets.folder.default_loader)
+
+        self.dataset = datasets.ImageFolder(path, loader=loader, transform=transform)
+
+        logger.info(f"loaded {len(self.dataset)} examples")
+
+    def __getitem__(self, index):
+        img, label = self.dataset[index]
+        return {"id": index, "img": img, "label": label}
+
+    def __len__(self):
+        return len(self.dataset)
+
+    def collater(self, samples):
+        if len(samples) == 0:
+            return {}
+
+        collated_img = torch.stack([s["img"] for s in samples], dim=0)
+
+        res = {
+            "id": torch.LongTensor([s["id"] for s in samples]),
+            "net_input": {
+                "imgs": collated_img,
+            },
+        }
+
+        if "label" in samples[0]:
+            res["net_input"]["labels"] = torch.LongTensor([s["label"] for s in samples])
+
+        return res
+
+    def num_tokens(self, index):
+        return 1
+
+    def size(self, index):
+        return 1
+
+    def ordered_indices(self):
+        """Return an ordered list of indices. Batches will be constructed based
+        on this order."""
+        if self.shuffle:
+            order = [np.random.permutation(len(self))]
+        else:
+            order = [np.arange(len(self))]
+
+        return order[0]

fairseq/examples/data2vec/data/mae_image_dataset.py

@@ -0,0 +1,418 @@
+# Copyright (c) Facebook, Inc. and its affiliates.
+#
+# This source code is licensed under the MIT license found in the
+# LICENSE file in the root directory of this source tree.
+
+
+from functools import partial
+import logging
+import math
+import random
+import time
+
+import numpy as np
+import os
+
+import torch
+
+from torchvision import datasets, transforms
+from .path_dataset import PathDataset
+
+from fairseq.data import FairseqDataset
+from fairseq.data.data_utils import compute_block_mask_1d, compute_block_mask_2d
+
+from shutil import copyfile
+
+logger = logging.getLogger(__name__)
+
+
+def load(path, loader, cache):
+    if hasattr(caching_loader, "cache_root"):
+        cache = caching_loader.cache_root
+
+    cached_path = cache + path
+
+    num_tries = 3
+    for curr_try in range(num_tries):
+        try:
+            if curr_try == 2:
+                return loader(path)
+            if not os.path.exists(cached_path) or curr_try > 0:
+                os.makedirs(os.path.dirname(cached_path), exist_ok=True)
+                copyfile(path, cached_path)
+                os.chmod(cached_path, 0o777)
+            return loader(cached_path)
+        except Exception as e:
+            logger.warning(str(e))
+            if "Errno 13" in str(e):
+                caching_loader.cache_root = f"/scratch/{random.randint(0, 69420)}"
+                logger.warning(f"setting cache root to {caching_loader.cache_root}")
+                cached_path = caching_loader.cache_root + path
+            if curr_try == (num_tries - 1):
+                raise
+            time.sleep(2)
+
+
+def caching_loader(cache_root: str, loader):
+    if cache_root is None:
+        return loader
+
+    if cache_root == "slurm_tmpdir":
+        cache_root = os.environ["SLURM_TMPDIR"]
+        assert len(cache_root) > 0
+
+    if not cache_root.endswith("/"):
+        cache_root += "/"
+
+    return partial(load, loader=loader, cache=cache_root)
+
+
+class RandomResizedCropAndInterpolationWithTwoPic:
+    """Crop the given PIL Image to random size and aspect ratio with random interpolation.
+
+    A crop of random size (default: of 0.08 to 1.0) of the original size and a random
+    aspect ratio (default: of 3/4 to 4/3) of the original aspect ratio is made. This crop
+    is finally resized to given size.
+    This is popularly used to train the Inception networks.
+
+    Args:
+        size: expected output size of each edge
+        scale: range of size of the origin size cropped
+        ratio: range of aspect ratio of the origin aspect ratio cropped
+        interpolation: Default: PIL.Image.BILINEAR
+    """
+
+    def __init__(
+        self,
+        size,
+        second_size=None,
+        scale=(0.08, 1.0),
+        ratio=(3.0 / 4.0, 4.0 / 3.0),
+        interpolation="bilinear",
+        second_interpolation="lanczos",
+    ):
+        if isinstance(size, tuple):
+            self.size = size
+        else:
+            self.size = (size, size)
+        if second_size is not None:
+            if isinstance(second_size, tuple):
+                self.second_size = second_size
+            else:
+                self.second_size = (second_size, second_size)
+        else:
+            self.second_size = None
+        if (scale[0] > scale[1]) or (ratio[0] > ratio[1]):
+            logger.warning("range should be of kind (min, max)")
+
+        if interpolation == "random":
+            from PIL import Image
+
+            self.interpolation = (Image.BILINEAR, Image.BICUBIC)
+        else:
+            self.interpolation = self._pil_interp(interpolation)
+
+        self.second_interpolation = (
+            self._pil_interp(second_interpolation)
+            if second_interpolation is not None
+            else None
+        )
+        self.scale = scale
+        self.ratio = ratio
+
+    def _pil_interp(self, method):
+        from PIL import Image
+
+        if method == "bicubic":
+            return Image.BICUBIC
+        elif method == "lanczos":
+            return Image.LANCZOS
+        elif method == "hamming":
+            return Image.HAMMING
+        else:
+            # default bilinear, do we want to allow nearest?
+            return Image.BILINEAR
+
+    @staticmethod
+    def get_params(img, scale, ratio):
+        """Get parameters for ``crop`` for a random sized crop.
+
+        Args:
+            img (PIL Image): Image to be cropped.
+            scale (tuple): range of size of the origin size cropped
+            ratio (tuple): range of aspect ratio of the origin aspect ratio cropped
+
+        Returns:
+            tuple: params (i, j, h, w) to be passed to ``crop`` for a random
+                sized crop.
+        """
+        area = img.size[0] * img.size[1]
+
+        for attempt in range(10):
+            target_area = random.uniform(*scale) * area
+            log_ratio = (math.log(ratio[0]), math.log(ratio[1]))
+            aspect_ratio = math.exp(random.uniform(*log_ratio))
+
+            w = int(round(math.sqrt(target_area * aspect_ratio)))
+            h = int(round(math.sqrt(target_area / aspect_ratio)))
+
+            if w <= img.size[0] and h <= img.size[1]:
+                i = random.randint(0, img.size[1] - h)
+                j = random.randint(0, img.size[0] - w)
+                return i, j, h, w
+
+        # Fallback to central crop
+        in_ratio = img.size[0] / img.size[1]
+        if in_ratio < min(ratio):
+            w = img.size[0]
+            h = int(round(w / min(ratio)))
+        elif in_ratio > max(ratio):
+            h = img.size[1]
+            w = int(round(h * max(ratio)))
+        else:  # whole image
+            w = img.size[0]
+            h = img.size[1]
+        i = (img.size[1] - h) // 2
+        j = (img.size[0] - w) // 2
+        return i, j, h, w
+
+    def __call__(self, img):
+        import torchvision.transforms.functional as F
+
+        """
+        Args:
+            img (PIL Image): Image to be cropped and resized.
+
+        Returns:
+            PIL Image: Randomly cropped and resized image.
+        """
+        i, j, h, w = self.get_params(img, self.scale, self.ratio)
+        if isinstance(self.interpolation, (tuple, list)):
+            interpolation = random.choice(self.interpolation)
+        else:
+            interpolation = self.interpolation
+        if self.second_size is None:
+            return F.resized_crop(img, i, j, h, w, self.size, interpolation)
+        else:
+            return F.resized_crop(
+                img, i, j, h, w, self.size, interpolation
+            ), F.resized_crop(
+                img, i, j, h, w, self.second_size, self.second_interpolation
+            )
+
+
+class MaeImageDataset(FairseqDataset):
+    def __init__(
+        self,
+        root: str,
+        split: str,
+        input_size,
+        local_cache_path=None,
+        shuffle=True,
+        key="imgs",
+        beit_transforms=False,
+        target_transform=False,
+        no_transform=False,
+        compute_mask=False,
+        patch_size: int = 16,
+        mask_prob: float = 0.75,
+        mask_prob_adjust: float = 0,
+        mask_length: int = 1,
+        inverse_mask: bool = False,
+        expand_adjacent: bool = False,
+        mask_dropout: float = 0,
+        non_overlapping: bool = False,
+        require_same_masks: bool = True,
+        clone_batch: int = 1,
+        dataset_type: str = "imagefolder",
+    ):
+        FairseqDataset.__init__(self)
+
+        self.shuffle = shuffle
+        self.key = key
+
+        loader = caching_loader(local_cache_path, datasets.folder.default_loader)
+
+        self.transform_source = None
+        self.transform_target = None
+
+        if target_transform:
+            self.transform_source = transforms.ColorJitter(0.4, 0.4, 0.4)
+            self.transform_target = transforms.ColorJitter(0.4, 0.4, 0.4)
+
+        if no_transform:
+            if input_size <= 224:
+                crop_pct = 224 / 256
+            else:
+                crop_pct = 1.0
+            size = int(input_size / crop_pct)
+
+            self.transform_train = transforms.Compose(
+                [
+                    transforms.Resize(size, interpolation=3),
+                    transforms.CenterCrop(input_size),
+                ]
+            )
+
+            self.transform_train = transforms.Resize((input_size, input_size))
+        elif beit_transforms:
+            beit_transform_list = []
+            if not target_transform:
+                beit_transform_list.append(transforms.ColorJitter(0.4, 0.4, 0.4))
+            beit_transform_list.extend(
+                [
+                    transforms.RandomHorizontalFlip(p=0.5),
+                    RandomResizedCropAndInterpolationWithTwoPic(
+                        size=input_size,
+                        second_size=None,
+                        interpolation="bicubic",
+                        second_interpolation=None,
+                    ),
+                ]
+            )
+            self.transform_train = transforms.Compose(beit_transform_list)
+        else:
+            self.transform_train = transforms.Compose(
+                [
+                    transforms.RandomResizedCrop(
+                        input_size, scale=(0.2, 1.0), interpolation=3
+                    ),  # 3 is bicubic
+                    transforms.RandomHorizontalFlip(),
+                ]
+            )
+        self.final_transform = transforms.Compose(
+            [
+                transforms.ToTensor(),
+                transforms.Normalize(
+                    mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]
+                ),
+            ]
+        )
+
+        if dataset_type == "imagefolder":
+            self.dataset = datasets.ImageFolder(
+                os.path.join(root, split), loader=loader
+            )
+        elif dataset_type == "path":
+            self.dataset = PathDataset(
+                root,
+                loader,
+                None,
+                None,
+                mean=[0.485, 0.456, 0.406],
+                std=[0.229, 0.224, 0.225],
+            )
+        else:
+            raise Exception(f"invalid dataset type {dataset_type}")
+
+        logger.info(
+            f"initial transform: {self.transform_train}, "
+            f"source transform: {self.transform_source}, "
+            f"target transform: {self.transform_target}, "
+            f"final transform: {self.final_transform}"
+        )
+        logger.info(f"loaded {len(self.dataset)} examples")
+
+        self.is_compute_mask = compute_mask
+        self.patches = (input_size // patch_size) ** 2
+        self.mask_prob = mask_prob
+        self.mask_prob_adjust = mask_prob_adjust
+        self.mask_length = mask_length
+        self.inverse_mask = inverse_mask
+        self.expand_adjacent = expand_adjacent
+        self.mask_dropout = mask_dropout
+        self.non_overlapping = non_overlapping
+        self.require_same_masks = require_same_masks
+        self.clone_batch = clone_batch
+
+    def __getitem__(self, index):
+        img, _ = self.dataset[index]
+
+        img = self.transform_train(img)
+
+        source = None
+        target = None
+        if self.transform_source is not None:
+            source = self.final_transform(self.transform_source(img))
+        if self.transform_target is not None:
+            target = self.final_transform(self.transform_target(img))
+
+        if source is None:
+            img = self.final_transform(img)
+
+        v = {"id": index, self.key: source if source is not None else img}
+        if target is not None:
+            v["target"] = target
+
+        if self.is_compute_mask:
+            if self.mask_length == 1:
+                mask = compute_block_mask_1d(
+                    shape=(self.clone_batch, self.patches),
+                    mask_prob=self.mask_prob,
+                    mask_length=self.mask_length,
+                    mask_prob_adjust=self.mask_prob_adjust,
+                    inverse_mask=self.inverse_mask,
+                    require_same_masks=True,
+                )
+            else:
+                mask = compute_block_mask_2d(
+                    shape=(self.clone_batch, self.patches),
+                    mask_prob=self.mask_prob,
+                    mask_length=self.mask_length,
+                    mask_prob_adjust=self.mask_prob_adjust,
+                    inverse_mask=self.inverse_mask,
+                    require_same_masks=True,
+                    expand_adjcent=self.expand_adjacent,
+                    mask_dropout=self.mask_dropout,
+                    non_overlapping=self.non_overlapping,
+                )
+
+            v["precomputed_mask"] = mask
+
+        return v
+
+    def __len__(self):
+        return len(self.dataset)
+
+    def collater(self, samples):
+        if len(samples) == 0:
+            return {}
+
+        collated_img = torch.stack([s[self.key] for s in samples], dim=0)
+
+        res = {
+            "id": torch.LongTensor([s["id"] for s in samples]),
+            "net_input": {
+                self.key: collated_img,
+            },
+        }
+
+        if "target" in samples[0]:
+            collated_target = torch.stack([s["target"] for s in samples], dim=0)
+            res["net_input"]["target"] = collated_target
+
+        if "precomputed_mask" in samples[0]:
+            collated_mask = torch.cat([s["precomputed_mask"] for s in samples], dim=0)
+            res["net_input"]["precomputed_mask"] = collated_mask
+
+        return res
+
+    def num_tokens(self, index):
+        return 1
+
+    def size(self, index):
+        return 1
+
+    @property
+    def sizes(self):
+        return np.full((len(self),), 1)
+
+    def ordered_indices(self):
+        """Return an ordered list of indices. Batches will be constructed based
+        on this order."""
+        if self.shuffle:
+            order = [np.random.permutation(len(self))]
+        else:
+            order = [np.arange(len(self))]
+
+        return order[0]

fairseq/examples/data2vec/data/modality.py

@@ -0,0 +1,14 @@
+# Copyright (c) 2017-present, Facebook, Inc.
+# All rights reserved.
+#
+# This source code is licensed under the license found in the LICENSE file in
+# the root directory of this source tree. An additional grant of patent rights
+# can be found in the PATENTS file in the same directory.
+
+from enum import Enum, auto
+
+
+class Modality(Enum):
+    AUDIO = auto()
+    IMAGE = auto()
+    TEXT = auto()

fairseq/examples/data2vec/data/path_dataset.py

@@ -0,0 +1,64 @@
+import glob
+import os
+from typing import List, Optional, Tuple
+
+import logging
+import numpy as np
+import torchvision.transforms.functional as TF
+import PIL
+from PIL import Image
+from torchvision.datasets import VisionDataset
+
+logger = logging.getLogger(__name__)
+
+
+class PathDataset(VisionDataset):
+    def __init__(
+        self,
+        root: List[str],
+        loader: None = None,
+        transform: Optional[str] = None,
+        extra_transform: Optional[str] = None,
+        mean: Optional[List[float]] = None,
+        std: Optional[List[float]] = None,
+    ):
+        super().__init__(root=root)
+
+        PIL.Image.MAX_IMAGE_PIXELS = 256000001
+
+        self.files = []
+        for folder in self.root:
+            self.files.extend(
+                sorted(glob.glob(os.path.join(folder, "**", "*.jpg"), recursive=True))
+            )
+            self.files.extend(
+                sorted(glob.glob(os.path.join(folder, "**", "*.png"), recursive=True))
+            )
+
+        self.transform = transform
+        self.extra_transform = extra_transform
+        self.mean = mean
+        self.std = std
+
+        self.loader = loader
+
+        logger.info(f"loaded {len(self.files)} samples from {root}")
+
+        assert (mean is None) == (std is None)
+
+    def __len__(self) -> int:
+        return len(self.files)
+
+    def __getitem__(self, idx) -> Tuple[np.ndarray, np.ndarray]:
+        path = self.files[idx]
+
+        if self.loader is not None:
+            return self.loader(path), None
+
+        img = Image.open(path).convert("RGB")
+        if self.transform is not None:
+            img = self.transform(img)
+        img = TF.to_tensor(img)
+        if self.mean is not None and self.std is not None:
+            img = TF.normalize(img, self.mean, self.std)
+        return img, None

fairseq/examples/data2vec/models/audio_classification.py

@@ -0,0 +1,614 @@
+# Copyright (c) Facebook, Inc. and its affiliates.
+#
+# This source code is licensed under the MIT license found in the
+# LICENSE file in the root directory of this source tree.
+
+import contextlib
+import logging
+import re
+from dataclasses import dataclass, field
+from typing import Any, Optional
+
+import torch
+import torch.nn as nn
+import torch.nn.functional as F
+import numpy as np
+from omegaconf import II, MISSING, open_dict
+
+from fairseq import checkpoint_utils, tasks
+from fairseq.dataclass import FairseqDataclass
+from fairseq.dataclass.utils import convert_namespace_to_omegaconf
+from fairseq.models import (
+    BaseFairseqModel,
+    register_model,
+)
+from fairseq.models.wav2vec.wav2vec2 import MASKING_DISTRIBUTION_CHOICES
+from fairseq.modules import TransposeLast
+from fairseq.tasks import FairseqTask
+
+logger = logging.getLogger(__name__)
+
+
+@dataclass
+class AudioClassificationConfig(FairseqDataclass):
+    model_path: str = field(
+        default=MISSING, metadata={"help": "path to wav2vec 2.0 model"}
+    )
+    no_pretrained_weights: bool = field(
+        default=False, metadata={"help": "if true, does not load pretrained weights"}
+    )
+    dropout_input: float = field(
+        default=0.0,
+        metadata={"help": "dropout to apply to the input (after feat extr)"},
+    )
+    final_dropout: float = field(
+        default=0.0,
+        metadata={"help": "dropout after transformer and before final projection"},
+    )
+    dropout: float = field(
+        default=0.0, metadata={"help": "dropout probability inside wav2vec 2.0 model"}
+    )
+    attention_dropout: float = field(
+        default=0.0,
+        metadata={
+            "help": "dropout probability for attention weights inside wav2vec 2.0 model"
+        },
+    )
+    activation_dropout: float = field(
+        default=0.0,
+        metadata={
+            "help": "dropout probability after activation in FFN inside wav2vec 2.0 model"
+        },
+    )
+
+    # masking
+    apply_mask: bool = field(
+        default=False, metadata={"help": "apply masking during fine-tuning"}
+    )
+    mask_length: int = field(
+        default=10, metadata={"help": "repeat the mask indices multiple times"}
+    )
+    mask_prob: float = field(
+        default=0.5,
+        metadata={
+            "help": "probability of replacing a token with mask (normalized by length)"
+        },
+    )
+    mask_selection: MASKING_DISTRIBUTION_CHOICES = field(
+        default="static", metadata={"help": "how to choose masks"}
+    )
+    mask_other: float = field(
+        default=0,
+        metadata={
+            "help": "secondary mask argument (used for more complex distributions), "
+            "see help in compute_mask_indices"
+        },
+    )
+    no_mask_overlap: bool = field(
+        default=False, metadata={"help": "whether to allow masks to overlap"}
+    )
+    mask_min_space: Optional[int] = field(
+        default=1,
+        metadata={"help": "min space between spans (if no overlap is enabled)"},
+    )
+    require_same_masks: bool = field(
+        default=True,
+        metadata={
+            "help": "whether to number of masked timesteps must be the same across all "
+            "examples in a batch"
+        },
+    )
+    mask_dropout: float = field(
+        default=0.0,
+        metadata={"help": "percent of masks to unmask for each sample"},
+    )
+
+    # channel masking
+    mask_channel_length: int = field(
+        default=10, metadata={"help": "length of the mask for features (channels)"}
+    )
+    mask_channel_prob: float = field(
+        default=0.0, metadata={"help": "probability of replacing a feature with 0"}
+    )
+    mask_channel_selection: MASKING_DISTRIBUTION_CHOICES = field(
+        default="static",
+        metadata={"help": "how to choose mask length for channel masking"},
+    )
+    mask_channel_other: float = field(
+        default=0,
+        metadata={
+            "help": "secondary mask argument (used for more complex distributions), "
+            "see help in compute_mask_indicesh"
+        },
+    )
+    no_mask_channel_overlap: bool = field(
+        default=False, metadata={"help": "whether to allow channel masks to overlap"}
+    )
+    freeze_finetune_updates: int = field(
+        default=0, metadata={"help": "dont finetune wav2vec for this many updates"}
+    )
+    feature_grad_mult: float = field(
+        default=0.0, metadata={"help": "reset feature grad mult in wav2vec 2.0 to this"}
+    )
+    layerdrop: float = field(
+        default=0.0, metadata={"help": "probability of dropping a layer in wav2vec 2.0"}
+    )
+    mask_channel_min_space: Optional[int] = field(
+        default=1,
+        metadata={"help": "min space between spans (if no overlap is enabled)"},
+    )
+    mask_channel_before: bool = False
+    normalize: bool = II("task.normalize")
+    data: str = II("task.data")
+    # this holds the loaded wav2vec args
+    d2v_args: Any = None
+    offload_activations: bool = field(
+        default=False, metadata={"help": "offload_activations"}
+    )
+    min_params_to_wrap: int = field(
+        default=int(1e8),
+        metadata={
+            "help": "minimum number of params for a layer to be wrapped with FSDP() when "
+            "training with --ddp-backend=fully_sharded. Smaller values will "
+            "improve memory efficiency, but may make torch.distributed "
+            "communication less efficient due to smaller input sizes. This option "
+            "is set to 0 (i.e., always wrap) when --checkpoint-activations or "
+            "--offload-activations are passed."
+        },
+    )
+
+    checkpoint_activations: bool = field(
+        default=False,
+        metadata={"help": "recompute activations and save memory for extra compute"},
+    )
+    ddp_backend: str = II("distributed_training.ddp_backend")
+
+    prediction_mode: str = "lin_softmax"
+    eval_prediction_mode: Optional[str] = None
+    conv_kernel: int = -1
+    conv_stride: int = 1
+    two_convs: bool = False
+    extreme_factor: float = 1.0
+
+    conv_feature_layers: Optional[str] = field(
+        default=None,
+        metadata={
+            "help": "string describing convolutional feature extraction layers in form of a python list that contains "
+            "[(dim, kernel_size, stride), ...]"
+        },
+    )
+
+    mixup_prob: float = 1.0
+    source_mixup: float = -1
+    same_mixup: bool = True
+    label_mixup: bool = False
+
+    gain_mode: str = "none"
+
+
+@register_model("audio_classification", dataclass=AudioClassificationConfig)
+class AudioClassificationModel(BaseFairseqModel):
+    def __init__(self, cfg: AudioClassificationConfig, num_classes):
+        super().__init__()
+
+        self.apply_mask = cfg.apply_mask
+        self.cfg = cfg
+
+        arg_overrides = {
+            "dropout": cfg.dropout,
+            "activation_dropout": cfg.activation_dropout,
+            "dropout_input": cfg.dropout_input,
+            "attention_dropout": cfg.attention_dropout,
+            "mask_length": cfg.mask_length,
+            "mask_prob": cfg.mask_prob,
+            "require_same_masks": getattr(cfg, "require_same_masks", True),
+            "mask_dropout": getattr(cfg, "mask_dropout", 0),
+            "mask_selection": cfg.mask_selection,
+            "mask_other": cfg.mask_other,
+            "no_mask_overlap": cfg.no_mask_overlap,
+            "mask_channel_length": cfg.mask_channel_length,
+            "mask_channel_prob": cfg.mask_channel_prob,
+            "mask_channel_before": cfg.mask_channel_before,
+            "mask_channel_selection": cfg.mask_channel_selection,
+            "mask_channel_other": cfg.mask_channel_other,
+            "no_mask_channel_overlap": cfg.no_mask_channel_overlap,
+            "encoder_layerdrop": cfg.layerdrop,
+            "feature_grad_mult": cfg.feature_grad_mult,
+            "checkpoint_activations": cfg.checkpoint_activations,
+            "offload_activations": cfg.offload_activations,
+            "min_params_to_wrap": cfg.min_params_to_wrap,
+            "mixup": -1,
+        }
+
+        if cfg.conv_feature_layers is not None:
+            arg_overrides["conv_feature_layers"] = cfg.conv_feature_layers
+
+        if cfg.d2v_args is None:
+            state = checkpoint_utils.load_checkpoint_to_cpu(
+                cfg.model_path, arg_overrides
+            )
+            d2v_args = state.get("cfg", None)
+            if d2v_args is None:
+                d2v_args = convert_namespace_to_omegaconf(state["args"])
+            d2v_args.criterion = None
+            d2v_args.lr_scheduler = None
+            cfg.d2v_args = d2v_args
+
+            logger.info(d2v_args)
+
+        else:
+            state = None
+            d2v_args = cfg.d2v_args
+
+        model_normalized = d2v_args.task.get(
+            "normalize", d2v_args.model.get("normalize", False)
+        )
+        assert cfg.normalize == model_normalized, (
+            "Fine-tuning works best when data normalization is the same. "
+            "Please check that --normalize is set or unset for both pre-training and here"
+        )
+
+        if hasattr(cfg, "checkpoint_activations") and cfg.checkpoint_activations:
+            with open_dict(d2v_args):
+                d2v_args.model.checkpoint_activations = cfg.checkpoint_activations
+
+        d2v_args.task.data = cfg.data
+        task = tasks.setup_task(d2v_args.task)
+        model = task.build_model(d2v_args.model, from_checkpoint=True)
+
+        model.remove_pretraining_modules()
+
+        if state is not None and not cfg.no_pretrained_weights:
+            self.load_model_weights(state, model, cfg)
+
+        d = d2v_args.model.encoder_embed_dim
+
+        self.d2v_model = model
+
+        self.final_dropout = nn.Dropout(cfg.final_dropout)
+        self.freeze_finetune_updates = cfg.freeze_finetune_updates
+        self.num_updates = 0
+
+        for p in self.parameters():
+            p.param_group = "pretrained"
+
+        if cfg.prediction_mode == "proj_avg_proj":
+            self.proj = nn.Linear(d, d * 2)
+            self.proj2 = nn.Linear(d * 2, num_classes)
+
+            for p in self.proj.parameters():
+                p.param_group = "projection"
+            for p in self.proj2.parameters():
+                p.param_group = "projection"
+        elif self.cfg.prediction_mode == "summary_proj":
+            self.proj = nn.Linear(d // 3, num_classes)
+            for p in self.proj.parameters():
+                p.param_group = "projection"
+        elif self.cfg.conv_kernel > 1 and not self.cfg.two_convs:
+            self.proj = nn.Sequential(
+                TransposeLast(),
+                nn.Conv1d(d, num_classes, kernel_size=self.cfg.conv_kernel, stride=self.cfg.conv_stride),
+                TransposeLast(),
+            )
+            for p in self.proj.parameters():
+                p.param_group = "projection"
+        elif self.cfg.conv_kernel > 0 and self.cfg.two_convs:
+            self.proj = nn.Sequential(
+                TransposeLast(),
+                nn.Conv1d(d, d, kernel_size=self.cfg.conv_kernel, stride=self.cfg.conv_stride),
+                TransposeLast(),
+                nn.GELU(),
+                nn.Linear(d, num_classes),
+            )
+            for p in self.proj.parameters():
+                p.param_group = "projection"
+        else:
+            self.proj = nn.Linear(d, num_classes)
+            for p in self.proj.parameters():
+                p.param_group = "projection"
+
+    def upgrade_state_dict_named(self, state_dict, name):
+        super().upgrade_state_dict_named(state_dict, name)
+        return state_dict
+
+    @classmethod
+    def build_model(cls, cfg: AudioClassificationConfig, task: FairseqTask):
+        """Build a new model instance."""
+
+        assert hasattr(task, "labels"), f"Task {task} must have an attribute 'labels'"
+
+        return cls(cfg, len(task.labels))
+
+    def load_model_weights(self, state, model, cfg):
+        if cfg.ddp_backend == "fully_sharded":
+            from fairseq.distributed import FullyShardedDataParallel
+
+            for name, module in model.named_modules():
+                if "encoder.layers" in name and len(name.split(".")) == 3:
+                    # Only for layers, we do a special handling and load the weights one by one
+                    # We dont load all weights together as that wont be memory efficient and may
+                    # cause oom
+                    new_dict = {
+                        k.replace(name + ".", ""): v
+                        for (k, v) in state["model"].items()
+                        if name + "." in k
+                    }
+                    assert isinstance(module, FullyShardedDataParallel)
+                    with module.summon_full_params():
+                        module.load_state_dict(new_dict, strict=True)
+                    module._reset_lazy_init()
+
+            # Once layers are loaded, filter them out and load everything else.
+            r = re.compile("encoder.layers.\d.")
+            filtered_list = list(filter(r.match, state["model"].keys()))
+
+            new_big_dict = {
+                k: v for (k, v) in state["model"].items() if k not in filtered_list
+            }
+
+            model.load_state_dict(new_big_dict, strict=False)
+        else:
+            if "_ema" in state["model"]:
+                del state["model"]["_ema"]
+            model.load_state_dict(state["model"], strict=False)
+
+    def set_num_updates(self, num_updates):
+        """Set the number of parameters updates."""
+        super().set_num_updates(num_updates)
+        self.num_updates = num_updates
+
+    def compute_gain(self, sound, fs=16_000, min_db=-80.0, mode="A_weighting"):
+        if fs == 16000:
+            n_fft = 2048
+        elif fs == 44100:
+            n_fft = 4096
+        else:
+            raise Exception("Invalid fs {}".format(fs))
+        stride = n_fft // 2
+
+        def a_weight(fs, n_fft, min_db=-80.0):
+            freq = np.linspace(0, fs // 2, n_fft // 2 + 1)
+            freq_sq = np.power(freq, 2)
+            freq_sq[0] = 1.0
+            weight = 2.0 + 20.0 * (
+                2 * np.log10(12194)
+                + 2 * np.log10(freq_sq)
+                - np.log10(freq_sq + 12194 ** 2)
+                - np.log10(freq_sq + 20.6 ** 2)
+                - 0.5 * np.log10(freq_sq + 107.7 ** 2)
+                - 0.5 * np.log10(freq_sq + 737.9 ** 2)
+            )
+            weight = np.maximum(weight, min_db)
+
+            return weight
+
+        gain = []
+        for i in range(0, len(sound) - n_fft + 1, stride):
+            if mode == "RMSE":
+                g = np.mean(sound[i : i + n_fft] ** 2)
+            elif mode == "A_weighting":
+                spec = np.fft.rfft(np.hanning(n_fft + 1)[:-1] * sound[i : i + n_fft])
+                power_spec = np.abs(spec) ** 2
+                a_weighted_spec = power_spec * np.power(10, a_weight(fs, n_fft) / 10)
+                g = np.sum(a_weighted_spec)
+            else:
+                raise Exception("Invalid mode {}".format(mode))
+            gain.append(g)
+
+        gain = np.array(gain)
+        gain = np.maximum(gain, np.power(10, min_db / 10))
+        gain_db = 10 * np.log10(gain)
+
+        return gain_db
+
+    # adapted from https://github.com/mil-tokyo/bc_learning_sound/blob/master/utils.py
+    def compute_gain_torch(self, sound, fs=16_000, min_db=-80.0, mode="A_weighting"):
+        if fs == 16000:
+            n_fft = 2048
+        elif fs == 44100:
+            n_fft = 4096
+        else:
+            raise Exception("Invalid fs {}".format(fs))
+
+        if mode == "A_weighting":
+            if not hasattr(self, f"a_weight"):
+                self.a_weight = {}
+
+            if fs not in self.a_weight:
+
+                def a_weight(fs, n_fft, min_db=-80.0):
+                    freq = np.linspace(0, fs // 2, n_fft // 2 + 1)
+                    freq_sq = freq ** 2
+                    freq_sq[0] = 1.0
+                    weight = 2.0 + 20.0 * (
+                        2 * np.log10(12194)
+                        + 2 * np.log10(freq_sq)
+                        - np.log10(freq_sq + 12194 ** 2)
+                        - np.log10(freq_sq + 20.6 ** 2)
+                        - 0.5 * np.log10(freq_sq + 107.7 ** 2)
+                        - 0.5 * np.log10(freq_sq + 737.9 ** 2)
+                    )
+                    weight = np.maximum(weight, min_db)
+
+                    return weight
+
+                self.a_weight[fs] = torch.from_numpy(
+                    np.power(10, a_weight(fs, n_fft, min_db) / 10)
+                ).to(device=sound.device)
+
+        sound = sound.unfold(-1, n_fft, n_fft // 2)
+
+        if mode == "RMSE":
+            sound = sound ** 2
+            g = sound.mean(-1)
+        elif mode == "A_weighting":
+            w = torch.hann_window(n_fft, device=sound.device) * sound
+            spec = torch.fft.rfft(w)
+            power_spec = spec.abs() ** 2
+            a_weighted_spec = power_spec * self.a_weight[fs]
+            g = a_weighted_spec.sum(-1)
+        else:
+            raise Exception("Invalid mode {}".format(mode))
+
+        gain = torch.maximum(g, torch.tensor(10 ** (min_db / 10), device=g.device))
+        gain_db = 10 * torch.log10(gain)
+
+        return gain_db
+
+    def forward(self, source, padding_mask, label=None, **kwargs):
+
+        if self.cfg.source_mixup >= 0 and self.training and self.cfg.mixup_prob > 0:
+            with torch.no_grad():
+                mixed_source = source
+                mix_mask = None
+                if self.cfg.mixup_prob < 1:
+                    mix_mask = (
+                        torch.empty((source.size(0),), device=source.device)
+                        .bernoulli_(self.cfg.mixup_prob)
+                        .bool()
+                    )
+                    mixed_source = source[mix_mask]
+
+                r = (
+                    torch.FloatTensor(
+                        1 if self.cfg.same_mixup else mixed_source.size(0)
+                    )
+                    .uniform_(max(1e-6, self.cfg.source_mixup), 1)
+                    .to(dtype=source.dtype, device=source.device)
+                )
+
+                mixup_perm = torch.randperm(source.size(0))
+                s2 = source[mixup_perm]
+
+                if self.cfg.gain_mode == "none":
+                    p = r.unsqueeze(-1)
+                    if mix_mask is not None:
+                        s2 = s2[mix_mask]
+                else:
+                    if self.cfg.gain_mode == "naive_rms":
+                        G1 = source.pow(2).mean(dim=-1).sqrt()
+                    else:
+                        G1, _ = self.compute_gain_torch(
+                            source, mode=self.cfg.gain_mode
+                        ).max(-1)
+                        G1 = G1.to(dtype=source.dtype)
+
+                    G2 = G1[mixup_perm]
+
+                    if mix_mask is not None:
+                        G1 = G1[mix_mask]
+                        G2 = G2[mix_mask]
+                        s2 = s2[mix_mask]
+
+                    p = 1 / (1 + 10 ** ((G1 - G2) / 20) * (1 - r) / r)
+                    p = p.unsqueeze(-1)
+
+                mixed = (p * mixed_source) + (1 - p) * s2
+
+                if mix_mask is None:
+                    source = mixed / torch.sqrt(p ** 2 + (1 - p) ** 2)
+                else:
+                    source[mix_mask] = mixed / torch.sqrt(p ** 2 + (1 - p) ** 2)
+
+                if label is not None and self.cfg.label_mixup:
+                    r = r.unsqueeze(-1)
+                    if mix_mask is None:
+                        label = label * r + (1 - r) * label[mixup_perm]
+                    else:
+                        label[mix_mask] = (
+                            label[mix_mask] * r + (1 - r) * label[mixup_perm][mix_mask]
+                        )
+
+        d2v_args = {
+            "source": source,
+            "padding_mask": padding_mask,
+            "mask": self.apply_mask and self.training,
+        }
+
+        ft = self.freeze_finetune_updates <= self.num_updates
+
+        with torch.no_grad() if not ft else contextlib.ExitStack():
+            res = self.d2v_model.extract_features(**d2v_args)
+
+            x = res["x"]
+            padding_mask = res["padding_mask"]
+            if padding_mask is not None:
+                x[padding_mask] = 0
+
+        x = self.final_dropout(x)
+
+        if self.training or (
+            self.cfg.eval_prediction_mode is None or self.cfg.eval_prediction_mode == ""
+        ):
+            prediction_mode = self.cfg.prediction_mode
+        else:
+            prediction_mode = self.cfg.eval_prediction_mode
+
+        if prediction_mode == "average_before":
+            x = x.mean(dim=1)
+
+        if prediction_mode != "summary_mha" and prediction_mode != "summary_proj" and prediction_mode != "cls":
+            x = self.proj(x)
+
+        logits = True
+        if prediction_mode == "lin_softmax":
+            x = F.logsigmoid(x.float())
+            x = torch.logsumexp(x + x, dim=1) - torch.logsumexp(x, dim=1)
+            x = x.clamp(max=0)
+            x = x - torch.log(-(torch.expm1(x)))
+        elif prediction_mode == "extremized_odds":
+            x = x.float().sum(dim=1)
+            x = x * self.cfg.extreme_factor
+        elif prediction_mode == "average_before":
+            x = x.float()
+        elif prediction_mode == "average":
+            x = x.float().mean(dim=1)
+        elif prediction_mode == "average_sigmoid":
+            x = torch.sigmoid(x.float())
+            x = x.mean(dim=1)
+            logits = False
+        elif prediction_mode == "max":
+            x, _ = x.float().max(dim=1)
+        elif prediction_mode == "max_sigmoid":
+            x = torch.sigmoid(x.float())
+            x, _ = x.float().max(dim=1)
+            logits = False
+        elif prediction_mode == "proj_avg_proj":
+            x = x.mean(dim=1)
+            x = self.proj2(x)
+        elif prediction_mode == "summary_mha" or prediction_mode == "summary_proj":
+            x = self.d2v_model.summary(
+                x, padding_mask, proj=prediction_mode == "summary_proj"
+            )
+            x = x.type_as(source)
+            x = self.proj(x)
+        elif prediction_mode == "cls":
+            x = x[:,0]
+            x = self.proj(x)
+        else:
+            raise Exception(f"unknown prediction mode {prediction_mode}")
+
+        if label is None:
+            return torch.sigmoid(x) if logits else x
+
+        x = torch.nan_to_num(x)
+
+        if logits:
+            loss = F.binary_cross_entropy_with_logits(
+                x, label.float(), reduction="none"
+            )
+        else:
+            loss = F.binary_cross_entropy(x, label.float(), reduction="none")
+
+        result = {
+            "losses": {
+                "main": loss,
+            },
+            "sample_size": label.sum(),
+        }
+
+        if not self.training:
+            result["_predictions"] = torch.sigmoid(x) if logits else x
+            result["_targets"] = label
+
+        return result

fairseq/examples/data2vec/models/data2vec2.py

@@ -0,0 +1,813 @@
+# Copyright (c) Facebook, Inc. and its affiliates.
+#
+# This source code is licensed under the MIT license found in the
+# LICENSE file in the root directory of this source tree.
+
+import logging
+import math
+from dataclasses import dataclass, field
+from typing import Optional, Callable
+from functools import partial
+import numpy as np
+
+from omegaconf import II
+
+import torch
+import torch.nn as nn
+import torch.nn.functional as F
+import torch.distributed as dist
+
+from fairseq.modules import EMAModule, EMAModuleConfig
+
+from fairseq.dataclass import FairseqDataclass
+from fairseq.models import BaseFairseqModel, register_model
+
+from examples.data2vec.data.modality import Modality
+
+from examples.data2vec.models.modalities.base import (
+    MaskSeed,
+    D2vModalityConfig,
+    ModalitySpecificEncoder,
+    get_annealed_rate,
+)
+from examples.data2vec.models.modalities.modules import (
+    D2vDecoderConfig,
+    AltBlock,
+    Decoder1d,
+)
+
+from examples.data2vec.models.modalities.audio import (
+    D2vAudioConfig,
+    AudioEncoder,
+)
+from examples.data2vec.models.modalities.images import (
+    D2vImageConfig,
+    ImageEncoder,
+)
+from examples.data2vec.models.modalities.text import (
+    D2vTextConfig,
+    TextEncoder,
+)
+
+logger = logging.getLogger(__name__)
+
+
+@dataclass
+class D2vModalitiesConfig(FairseqDataclass):
+    audio: D2vAudioConfig = D2vAudioConfig()
+    image: D2vImageConfig = D2vImageConfig()
+    text: D2vTextConfig = D2vTextConfig()
+
+
+@dataclass
+class Data2VecMultiConfig(FairseqDataclass):
+
+    loss_beta: float = field(
+        default=0, metadata={"help": "beta for smooth l1 loss. 0 means use l2 loss"}
+    )
+    loss_scale: Optional[float] = field(
+        default=None,
+        metadata={
+            "help": "scale the reconstruction loss by this constant. if None then scales by 1/sqrt(dim)"
+        },
+    )
+
+    depth: int = 8
+    start_drop_path_rate: float = 0
+    end_drop_path_rate: float = 0
+    num_heads: int = 12
+    norm_eps: float = 1e-6
+    norm_affine: bool = True
+    encoder_dropout: float = 0.1
+    post_mlp_drop: float = 0.1
+    attention_dropout: float = 0.1
+    activation_dropout: float = 0.0
+    dropout_input: float = 0.0
+    layerdrop: float = 0.0
+    embed_dim: int = 768
+    mlp_ratio: float = 4
+    layer_norm_first: bool = False
+
+    average_top_k_layers: int = field(
+        default=8, metadata={"help": "how many layers to average"}
+    )
+
+    end_of_block_targets: bool = False
+
+    clone_batch: int = 1
+
+    layer_norm_target_layer: bool = False
+    batch_norm_target_layer: bool = False
+    instance_norm_target_layer: bool = False
+    instance_norm_targets: bool = False
+    layer_norm_targets: bool = False
+
+    ema_decay: float = field(default=0.999, metadata={"help": "initial ema decay rate"})
+    ema_same_dtype: bool = True
+    log_norms: bool = True
+    ema_end_decay: float = field(
+        default=0.9999, metadata={"help": "final ema decay rate"}
+    )
+
+    # when to finish annealing ema decay rate
+    ema_anneal_end_step: int = II("optimization.max_update")
+
+    ema_encoder_only: bool = field(
+        default=True,
+        metadata={
+            "help": "whether to momentum update only the shared transformer encoder"
+        },
+    )
+
+    max_update: int = II("optimization.max_update")
+
+    modalities: D2vModalitiesConfig = D2vModalitiesConfig()
+
+    shared_decoder: Optional[D2vDecoderConfig] = None
+
+    min_target_var: float = field(
+        default=0.1, metadata={"help": "stop training if target var falls below this"}
+    )
+    min_pred_var: float = field(
+        default=0.01,
+        metadata={"help": "stop training if prediction var falls below this"},
+    )
+
+    supported_modality: Optional[Modality] = None
+    mae_init: bool = False
+
+    seed: int = II("common.seed")
+
+    skip_ema: bool = False
+
+    cls_loss: float = 0
+    recon_loss: float = 0
+    d2v_loss: float = 1
+
+    decoder_group: bool = False
+
+
+@register_model("data2vec_multi", dataclass=Data2VecMultiConfig)
+class Data2VecMultiModel(BaseFairseqModel):
+    def make_modality_encoder(
+        self,
+        cfg: D2vModalityConfig,
+        embed_dim: int,
+        make_block: Callable[[float], nn.ModuleList],
+        norm_layer: Callable[[int], nn.LayerNorm],
+        layer_norm_first: bool,
+        alibi_biases,
+        task,
+    ) -> ModalitySpecificEncoder:
+        if cfg.type == Modality.AUDIO:
+            enc_cls = AudioEncoder
+        elif cfg.type == Modality.IMAGE:
+            enc_cls = ImageEncoder
+        elif cfg.type == Modality.TEXT:
+            enc_cls = TextEncoder
+            if hasattr(task, "text_task"):
+                task = task.text_task
+        else:
+            raise Exception(f"unsupported modality {cfg.type}")
+
+        return enc_cls(
+            cfg,
+            embed_dim,
+            make_block,
+            norm_layer,
+            layer_norm_first,
+            alibi_biases,
+            task,
+        )
+
+    def __init__(self, cfg: Data2VecMultiConfig, modalities, skip_ema=False, task=None):
+        super().__init__()
+        self.cfg = cfg
+        self.modalities = modalities
+        self.task = task
+
+        make_layer_norm = partial(
+            nn.LayerNorm, eps=cfg.norm_eps, elementwise_affine=cfg.norm_affine
+        )
+
+        def make_block(drop_path, dim=None, heads=None):
+            return AltBlock(
+                cfg.embed_dim if dim is None else dim,
+                cfg.num_heads if heads is None else heads,
+                cfg.mlp_ratio,
+                qkv_bias=True,
+                drop=cfg.encoder_dropout,
+                attn_drop=cfg.attention_dropout,
+                mlp_drop=cfg.activation_dropout,
+                post_mlp_drop=cfg.post_mlp_drop,
+                drop_path=drop_path,
+                norm_layer=make_layer_norm,
+                layer_norm_first=cfg.layer_norm_first,
+                ffn_targets=not cfg.end_of_block_targets,
+            )
+
+        self.alibi_biases = {}
+        self.modality_encoders = nn.ModuleDict()
+        for mod in self.modalities:
+            mod_cfg = getattr(cfg.modalities, mod.name.lower())
+            enc = self.make_modality_encoder(
+                mod_cfg,
+                cfg.embed_dim,
+                make_block,
+                make_layer_norm,
+                cfg.layer_norm_first,
+                self.alibi_biases,
+                task,
+            )
+            self.modality_encoders[mod.name] = enc
+
+        self.ema = None
+
+        self.average_top_k_layers = cfg.average_top_k_layers
+        self.loss_beta = cfg.loss_beta
+        self.loss_scale = cfg.loss_scale
+
+        self.dropout_input = nn.Dropout(cfg.dropout_input)
+
+        dpr = np.linspace(cfg.start_drop_path_rate, cfg.end_drop_path_rate, cfg.depth)
+
+        self.blocks = nn.ModuleList([make_block(dpr[i]) for i in range(cfg.depth)])
+
+        self.norm = None
+        if cfg.layer_norm_first:
+            self.norm = make_layer_norm(cfg.embed_dim)
+
+        if self.cfg.mae_init:
+            self.apply(self._init_weights)
+        else:
+            from fairseq.modules.transformer_sentence_encoder import init_bert_params
+
+            self.apply(init_bert_params)
+
+        for mod_enc in self.modality_encoders.values():
+            mod_enc.reset_parameters()
+
+        if not skip_ema:
+            self.ema = self.make_ema_teacher(cfg.ema_decay)
+            self.shared_decoder = (
+                Decoder1d(cfg.shared_decoder, cfg.embed_dim)
+                if self.cfg.shared_decoder is not None
+                else None
+            )
+            if self.shared_decoder is not None:
+                self.shared_decoder.apply(self._init_weights)
+
+            self.recon_proj = None
+            if cfg.recon_loss > 0:
+                self.recon_proj = nn.Linear(cfg.embed_dim, cfg.embed_dim)
+
+        for pn, p in self.named_parameters():
+            if len(p.shape) == 1 or pn.endswith(".bias") or "alibi_scale" in pn:
+                p.optim_overrides = {"optimizer": {"weight_decay_scale": 0}}
+            if cfg.decoder_group and "decoder" in pn:
+                p.param_group = "decoder"
+
+        self.num_updates = 0
+
+    def _init_weights(self, m):
+
+        try:
+            from apex.normalization import FusedLayerNorm
+
+            fn = FusedLayerNorm
+        except:
+            fn = nn.LayerNorm
+
+        if isinstance(m, nn.Linear):
+            torch.nn.init.xavier_uniform_(m.weight)
+            if isinstance(m, nn.Linear) and m.bias is not None:
+                nn.init.constant_(m.bias, 0)
+        elif isinstance(m, nn.LayerNorm) or isinstance(m, fn):
+            if m.bias is not None:
+                nn.init.constant_(m.bias, 0)
+            if m.weight is not None:
+                nn.init.constant_(m.weight, 1.0)
+
+    @torch.no_grad()
+    def make_ema_teacher(self, ema_decay):
+        ema_config = EMAModuleConfig(
+            ema_decay=ema_decay,
+            ema_fp32=True,
+            log_norms=self.cfg.log_norms,
+            add_missing_params=False,
+        )
+
+        model_copy = self.make_target_model()
+
+        return EMAModule(
+            model_copy,
+            ema_config,
+            copy_model=False,
+        )
+
+    def make_target_model(self):
+        logger.info("making target model")
+
+        model_copy = Data2VecMultiModel(
+            self.cfg, self.modalities, skip_ema=True, task=self.task
+        )
+
+        if self.cfg.ema_encoder_only:
+            model_copy = model_copy.blocks
+            for p_s, p_t in zip(self.blocks.parameters(), model_copy.parameters()):
+                p_t.data.copy_(p_s.data)
+        else:
+            for p_s, p_t in zip(self.parameters(), model_copy.parameters()):
+                p_t.data.copy_(p_s.data)
+
+            for mod_enc in model_copy.modality_encoders.values():
+                mod_enc.decoder = None
+                if not mod_enc.modality_cfg.ema_local_encoder:
+                    mod_enc.local_encoder = None
+                    mod_enc.project_features = None
+
+        model_copy.requires_grad_(False)
+        return model_copy
+
+    def set_num_updates(self, num_updates):
+        super().set_num_updates(num_updates)
+
+        if self.ema is not None and (
+            (self.num_updates == 0 and num_updates > 1)
+            or self.num_updates >= num_updates
+        ):
+            pass
+        elif self.training and self.ema is not None:
+            ema_weight_decay = None
+            if self.cfg.ema_decay != self.cfg.ema_end_decay:
+                if num_updates >= self.cfg.ema_anneal_end_step:
+                    decay = self.cfg.ema_end_decay
+                else:
+                    decay = get_annealed_rate(
+                        self.cfg.ema_decay,
+                        self.cfg.ema_end_decay,
+                        num_updates,
+                        self.cfg.ema_anneal_end_step,
+                    )
+                self.ema.set_decay(decay, weight_decay=ema_weight_decay)
+            if self.ema.get_decay() < 1:
+                self.ema.step(self.blocks if self.cfg.ema_encoder_only else self)
+
+        self.num_updates = num_updates
+
+    def state_dict(self, destination=None, prefix="", keep_vars=False):
+        state = super().state_dict(destination, prefix, keep_vars)
+
+        if self.ema is not None:
+            state[prefix + "_ema"] = self.ema.fp32_params
+
+        return state
+
+    def _load_from_state_dict(self, state_dict, prefix, *args, **kwargs):
+        k = prefix + "_ema"
+        if self.ema is not None:
+            assert k in state_dict
+            self.ema.restore(state_dict[k], True)
+            del state_dict[k]
+        elif k in state_dict:
+            del state_dict[k]
+
+        return super()._load_from_state_dict(state_dict, prefix, *args, **kwargs)
+
+    @classmethod
+    def build_model(cls, cfg: Data2VecMultiConfig, task=None):
+        """Build a new model instance."""
+        if task is None or not hasattr(task, "supported_modalities"):
+            modalities = (
+                [cfg.supported_modality]
+                if cfg.supported_modality is not None
+                else [
+                    Modality.AUDIO,
+                    Modality.IMAGE,
+                    Modality.TEXT,
+                ]
+            )
+        else:
+            modalities = task.supported_modalities
+        return cls(cfg, modalities, task=task, skip_ema=cfg.skip_ema)
+
+    def forward(
+        self,
+        source,
+        target=None,
+        id=None,
+        mode=None,
+        padding_mask=None,
+        mask=True,
+        features_only=False,
+        force_remove_masked=False,
+        remove_extra_tokens=True,
+        precomputed_mask=None,
+    ):
+        if mode is None:
+            assert self.cfg.supported_modality is not None
+            mode = self.cfg.supported_modality
+
+        if isinstance(mode, Modality):
+            mode = mode.name
+
+        feature_extractor = self.modality_encoders[mode]
+
+        mask_seeds = None
+        if id is not None:
+            mask_seeds = MaskSeed(seed=self.cfg.seed, update=self.num_updates, ids=id)
+
+        extractor_out = feature_extractor(
+            source,
+            padding_mask,
+            mask,
+            remove_masked=not features_only or force_remove_masked,
+            clone_batch=self.cfg.clone_batch if not features_only else 1,
+            mask_seeds=mask_seeds,
+            precomputed_mask=precomputed_mask,
+        )
+
+        x = extractor_out["x"]
+        encoder_mask = extractor_out["encoder_mask"]
+        masked_padding_mask = extractor_out["padding_mask"]
+        masked_alibi_bias = extractor_out.get("alibi_bias", None)
+        alibi_scale = extractor_out.get("alibi_scale", None)
+
+        if self.dropout_input is not None:
+            x = self.dropout_input(x)
+
+        layer_results = []
+        for i, blk in enumerate(self.blocks):
+            if (
+                not self.training
+                or self.cfg.layerdrop == 0
+                or (np.random.random() > self.cfg.layerdrop)
+            ):
+                ab = masked_alibi_bias
+                if ab is not None and alibi_scale is not None:
+                    scale = (
+                        alibi_scale[i]
+                        if alibi_scale.size(0) > 1
+                        else alibi_scale.squeeze(0)
+                    )
+                    ab = ab * scale.type_as(ab)
+
+                x, lr = blk(
+                    x,
+                    padding_mask=masked_padding_mask,
+                    alibi_bias=ab,
+                )
+                if features_only:
+                    layer_results.append(lr)
+
+        if self.norm is not None:
+            x = self.norm(x)
+
+        if features_only:
+            if remove_extra_tokens:
+                x = x[:, feature_extractor.modality_cfg.num_extra_tokens :]
+                if masked_padding_mask is not None:
+                    masked_padding_mask = masked_padding_mask[
+                        :, feature_extractor.modality_cfg.num_extra_tokens :
+                    ]
+
+            return {
+                "x": x,
+                "padding_mask": masked_padding_mask,
+                "layer_results": layer_results,
+                "mask": encoder_mask,
+            }
+
+        xs = []
+
+        if self.shared_decoder is not None:
+            dx = self.forward_decoder(
+                x,
+                feature_extractor,
+                self.shared_decoder,
+                encoder_mask,
+            )
+            xs.append(dx)
+        if feature_extractor.decoder is not None:
+            dx = self.forward_decoder(
+                x,
+                feature_extractor,
+                feature_extractor.decoder,
+                encoder_mask,
+            )
+            xs.append(dx)
+            orig_x = x
+
+        assert len(xs) > 0
+
+        p = next(self.ema.model.parameters())
+        device = x.device
+        dtype = x.dtype
+        ema_device = p.device
+        ema_dtype = p.dtype
+
+        if not self.cfg.ema_same_dtype:
+            dtype = ema_dtype
+
+        if ema_device != device or ema_dtype != dtype:
+            logger.info(f"adjusting ema dtype to {dtype} and device to {device}")
+            self.ema.model = self.ema.model.to(dtype=dtype, device=device)
+            ema_dtype = dtype
+
+            def to_device(d):
+                for k, p in d.items():
+                    if isinstance(d[k], dict):
+                        to_device(d[k])
+                    else:
+                        d[k] = p.to(device=device)
+
+            to_device(self.ema.fp32_params)
+        tm = self.ema.model
+
+        with torch.no_grad():
+            tm.eval()
+
+            if self.cfg.ema_encoder_only:
+                assert target is None
+                ema_input = extractor_out["local_features"]
+                ema_input = feature_extractor.contextualized_features(
+                    ema_input.to(dtype=ema_dtype),
+                    padding_mask,
+                    mask=False,
+                    remove_masked=False,
+                )
+                ema_blocks = tm
+            else:
+                ema_blocks = tm.blocks
+                if feature_extractor.modality_cfg.ema_local_encoder:
+                    inp = (
+                        target.to(dtype=ema_dtype)
+                        if target is not None
+                        else source.to(dtype=ema_dtype)
+                    )
+                    ema_input = tm.modality_encoders[mode](
+                        inp,
+                        padding_mask,
+                        mask=False,
+                        remove_masked=False,
+                    )
+                else:
+                    assert target is None
+                    ema_input = extractor_out["local_features"]
+                    ema_feature_enc = tm.modality_encoders[mode]
+                    ema_input = ema_feature_enc.contextualized_features(
+                        ema_input.to(dtype=ema_dtype),
+                        padding_mask,
+                        mask=False,
+                        remove_masked=False,
+                    )
+
+            ema_padding_mask = ema_input["padding_mask"]
+            ema_alibi_bias = ema_input.get("alibi_bias", None)
+            ema_alibi_scale = ema_input.get("alibi_scale", None)
+            ema_input = ema_input["x"]
+
+            y = []
+            ema_x = []
+            extra_tokens = feature_extractor.modality_cfg.num_extra_tokens
+            for i, blk in enumerate(ema_blocks):
+                ab = ema_alibi_bias
+                if ab is not None and alibi_scale is not None:
+                    scale = (
+                        ema_alibi_scale[i]
+                        if ema_alibi_scale.size(0) > 1
+                        else ema_alibi_scale.squeeze(0)
+                    )
+                    ab = ab * scale.type_as(ab)
+
+                ema_input, lr = blk(
+                    ema_input,
+                    padding_mask=ema_padding_mask,
+                    alibi_bias=ab,
+                )
+                y.append(lr[:, extra_tokens:])
+                ema_x.append(ema_input[:, extra_tokens:])
+
+        y = self.make_targets(y, self.average_top_k_layers)
+        orig_targets = y
+
+        if self.cfg.clone_batch > 1:
+            y = y.repeat_interleave(self.cfg.clone_batch, 0)
+
+        masked = encoder_mask.mask.unsqueeze(-1)
+        masked_b = encoder_mask.mask.bool()
+        y = y[masked_b]
+
+        if xs[0].size(1) == masked_b.size(1):
+            xs = [x[masked_b] for x in xs]
+        else:
+            xs = [x.reshape(-1, x.size(-1)) for x in xs]
+
+        sample_size = masked.sum().long()
+
+        result = {
+            "losses": {},
+            "sample_size": sample_size,
+        }
+
+        sample_size = result["sample_size"]
+
+        if self.cfg.cls_loss > 0:
+            assert extra_tokens > 0
+            cls_target = orig_targets.mean(dim=1)
+            if self.cfg.clone_batch > 1:
+                cls_target = cls_target.repeat_interleave(self.cfg.clone_batch, 0)
+            cls_pred = x[:, extra_tokens - 1]
+            result["losses"]["cls"] = self.d2v_loss(cls_pred, cls_target) * (
+                self.cfg.cls_loss * sample_size
+            )
+
+        if self.cfg.recon_loss > 0:
+
+            with torch.no_grad():
+                target = feature_extractor.patchify(source)
+                mean = target.mean(dim=-1, keepdim=True)
+                var = target.var(dim=-1, keepdim=True)
+                target = (target - mean) / (var + 1.0e-6) ** 0.5
+
+                if self.cfg.clone_batch > 1:
+                    target = target.repeat_interleave(self.cfg.clone_batch, 0)
+
+                if masked_b is not None:
+                    target = target[masked_b]
+
+            recon = xs[0]
+            if self.recon_proj is not None:
+                recon = self.recon_proj(recon)
+
+            result["losses"]["recon"] = (
+                self.d2v_loss(recon, target.float()) * self.cfg.recon_loss
+            )
+
+        if self.cfg.d2v_loss > 0:
+            for i, x in enumerate(xs):
+                reg_loss = self.d2v_loss(x, y)
+                n = f"{mode}_regression_{i}" if len(xs) > 1 else f"{mode}_regression"
+                result["losses"][n] = reg_loss * self.cfg.d2v_loss
+
+        suffix = "" if len(self.modalities) == 1 else f"_{mode}"
+        with torch.no_grad():
+            if encoder_mask is not None:
+                result["masked_pct"] = 1 - (
+                    encoder_mask.ids_keep.size(1) / encoder_mask.ids_restore.size(1)
+                )
+            for i, x in enumerate(xs):
+                n = f"pred_var{suffix}_{i}" if len(xs) > 1 else f"pred_var{suffix}"
+                result[n] = self.compute_var(x.float())
+            if self.ema is not None:
+                for k, v in self.ema.logs.items():
+                    result[k] = v
+
+            y = y.float()
+            result[f"target_var{suffix}"] = self.compute_var(y)
+
+            if self.num_updates > 5000:
+                if result[f"target_var{suffix}"] < self.cfg.min_target_var:
+                    logger.error(
+                        f"target var is {result[f'target_var{suffix}'].item()} < {self.cfg.min_target_var}, exiting ({mode})"
+                    )
+                    raise Exception(
+                        f"target var is {result[f'target_var{suffix}'].item()} < {self.cfg.min_target_var}, exiting ({mode})"
+                    )
+
+                for k in result.keys():
+                    if k.startswith("pred_var") and result[k] < self.cfg.min_pred_var:
+                        logger.error(
+                            f"{k} is {result[k].item()} < {self.cfg.min_pred_var}, exiting ({mode})"
+                        )
+                        raise Exception(
+                            f"{k} is {result[k].item()} < {self.cfg.min_pred_var}, exiting ({mode})"
+                        )
+
+            result["ema_decay"] = self.ema.get_decay() * 1000
+
+        return result
+
+    def forward_decoder(
+        self,
+        x,
+        feature_extractor,
+        decoder,
+        mask_info,
+    ):
+        x = feature_extractor.decoder_input(x, mask_info)
+        x = decoder(*x)
+
+        return x
+
+    def d2v_loss(self, x, y):
+        x = x.view(-1, x.size(-1)).float()
+        y = y.view(-1, x.size(-1))
+
+        if self.loss_beta == 0:
+            loss = F.mse_loss(x, y, reduction="none")
+        else:
+            loss = F.smooth_l1_loss(x, y, reduction="none", beta=self.loss_beta)
+
+        if self.loss_scale is not None:
+            scale = self.loss_scale
+        else:
+            scale = 1 / math.sqrt(x.size(-1))
+
+        reg_loss = loss * scale
+
+        return reg_loss
+
+    def make_targets(self, y, num_layers):
+
+        with torch.no_grad():
+            target_layer_results = y[-num_layers:]
+
+            permuted = False
+            if self.cfg.instance_norm_target_layer or self.cfg.batch_norm_target_layer:
+                target_layer_results = [
+                    tl.transpose(1, 2) for tl in target_layer_results  # BTC -> BCT
+                ]
+                permuted = True
+            if self.cfg.batch_norm_target_layer:
+                target_layer_results = [
+                    F.batch_norm(
+                        tl.float(), running_mean=None, running_var=None, training=True
+                    )
+                    for tl in target_layer_results
+                ]
+            if self.cfg.instance_norm_target_layer:
+                target_layer_results = [
+                    F.instance_norm(tl.float()) for tl in target_layer_results
+                ]
+            if permuted:
+                target_layer_results = [
+                    tl.transpose(1, 2) for tl in target_layer_results  # BCT -> BTC
+                ]
+            if self.cfg.layer_norm_target_layer:
+                target_layer_results = [
+                    F.layer_norm(tl.float(), tl.shape[-1:])
+                    for tl in target_layer_results
+                ]
+
+        y = target_layer_results[0].float()
+        for tl in target_layer_results[1:]:
+            y.add_(tl.float())
+        y = y.div_(len(target_layer_results))
+
+        if self.cfg.layer_norm_targets:
+            y = F.layer_norm(y, y.shape[-1:])
+
+        if self.cfg.instance_norm_targets:
+            y = F.instance_norm(y.transpose(1, 2)).transpose(1, 2)
+
+        return y
+
+    @staticmethod
+    def compute_var(y):
+        y = y.view(-1, y.size(-1))
+        if dist.is_initialized():
+            zc = torch.tensor(y.size(0)).cuda()
+            zs = y.sum(dim=0)
+            zss = (y**2).sum(dim=0)
+
+            dist.all_reduce(zc)
+            dist.all_reduce(zs)
+            dist.all_reduce(zss)
+
+            var = zss / (zc - 1) - (zs**2) / (zc * (zc - 1))
+            return torch.sqrt(var + 1e-6).mean()
+        else:
+            return torch.sqrt(y.var(dim=0) + 1e-6).mean()
+
+    def extract_features(
+        self, source, mode=None, padding_mask=None, mask=False, remove_extra_tokens=True
+    ):
+        res = self.forward(
+            source,
+            mode=mode,
+            padding_mask=padding_mask,
+            mask=mask,
+            features_only=True,
+            remove_extra_tokens=remove_extra_tokens,
+        )
+        return res
+
+    def remove_pretraining_modules(self, modality=None, keep_decoder=False):
+        self.ema = None
+        self.cfg.clone_batch = 1
+        self.recon_proj = None
+
+        if not keep_decoder:
+            self.shared_decoder = None
+
+        modality = modality.lower() if modality is not None else None
+        for k in list(self.modality_encoders.keys()):
+            if modality is not None and k.lower() != modality:
+                del self.modality_encoders[k]
+            else:
+                self.modality_encoders[k].remove_pretraining_modules(
+                    keep_decoder=keep_decoder
+                )
+                if not keep_decoder:
+                    self.modality_encoders[k].decoder = None

fairseq/examples/data2vec/models/data2vec_audio.py

@@ -0,0 +1,537 @@
+# Copyright (c) Facebook, Inc. and its affiliates.
+#
+# This source code is licensed under the MIT license found in the
+# LICENSE file in the root directory of this source tree.
+
+import logging
+import math
+from dataclasses import dataclass, field
+from typing import Optional
+
+from omegaconf import II
+
+import torch
+import torch.nn as nn
+import torch.nn.functional as F
+import torch.distributed as dist
+
+from fairseq.modules import EMAModule, EMAModuleConfig
+from fairseq.data.data_utils import compute_mask_indices
+from fairseq.models import BaseFairseqModel, register_model
+from fairseq.models.wav2vec import (
+    ConvFeatureExtractionModel,
+    Wav2Vec2Config,
+    TransformerEncoder,
+)
+from fairseq.modules import (
+    GradMultiply,
+    LayerNorm,
+)
+from fairseq.utils import index_put
+
+
+logger = logging.getLogger(__name__)
+
+
+@dataclass
+class Data2VecAudioConfig(Wav2Vec2Config):
+
+    loss_beta: float = field(
+        default=0, metadata={"help": "beta for smooth l1 loss. 0 means use l2 loss"}
+    )
+    loss_scale: Optional[float] = field(
+        default=None,
+        metadata={
+            "help": "scale the reconstruction loss by this constant. if None then scales by 1/sqrt(dim)"
+        },
+    )
+    average_top_k_layers: int = field(
+        default=8, metadata={"help": "how many layers to average"}
+    )
+
+    layer_norm_target_layer: bool = False
+    instance_norm_target_layer: bool = False
+    instance_norm_targets: bool = False
+    layer_norm_targets: bool = False
+    batch_norm_target_layer: bool = False
+    group_norm_target_layer: bool = False
+
+    ema_decay: float = field(default=0.999, metadata={"help": "initial ema decay rate"})
+    ema_end_decay: float = field(
+        default=0.9999, metadata={"help": "final ema decay rate"}
+    )
+
+    # when to finish annealing ema decay rate
+    ema_anneal_end_step: int = II("optimization.max_update")
+
+    ema_transformer_only: bool = field(
+        default=True,
+        metadata={"help": "whether to momentum update only the transformer"},
+    )
+    ema_layers_only: bool = field(
+        default=True,
+        metadata={"help": "whether to momentum update only the transformer layers"},
+    )
+
+    max_update: int = II("optimization.max_update")
+
+    min_target_var: float = field(
+        default=0.1, metadata={"help": "stop training if target var falls below this"}
+    )
+    min_pred_var: float = field(
+        default=0.01,
+        metadata={"help": "stop training if prediction var falls below this"},
+    )
+
+
+def get_annealed_rate(start, end, curr_step, total_steps):
+    r = end - start
+    pct_remaining = 1 - curr_step / total_steps
+    return end - r * pct_remaining
+
+
+@register_model("data2vec_audio", dataclass=Data2VecAudioConfig)
+class Data2VecAudioModel(BaseFairseqModel):
+    def __init__(self, cfg: Data2VecAudioConfig):
+        super().__init__()
+        self.cfg = cfg
+
+        feature_enc_layers = eval(cfg.conv_feature_layers)
+        self.extractor_embed = feature_enc_layers[-1][0]
+
+        self.ema = None
+        self.embed = cfg.encoder_embed_dim
+
+        self.average_top_k_layers = cfg.average_top_k_layers
+        self.loss_beta = cfg.loss_beta
+        self.loss_scale = cfg.loss_scale
+
+        self.feature_extractor = ConvFeatureExtractionModel(
+            conv_layers=feature_enc_layers,
+            dropout=0.0,
+            mode=cfg.extractor_mode,
+            conv_bias=cfg.conv_bias,
+        )
+
+        self.post_extract_proj = nn.Linear(self.extractor_embed, cfg.encoder_embed_dim)
+
+        self.mask_prob = cfg.mask_prob
+        self.mask_selection = cfg.mask_selection
+        self.mask_other = cfg.mask_other
+        self.mask_length = cfg.mask_length
+        self.no_mask_overlap = cfg.no_mask_overlap
+        self.mask_min_space = cfg.mask_min_space
+
+        self.mask_channel_prob = cfg.mask_channel_prob
+        self.mask_channel_before = cfg.mask_channel_before
+        self.mask_channel_selection = cfg.mask_channel_selection
+        self.mask_channel_other = cfg.mask_channel_other
+        self.mask_channel_length = cfg.mask_channel_length
+        self.no_mask_channel_overlap = cfg.no_mask_channel_overlap
+        self.mask_channel_min_space = cfg.mask_channel_min_space
+
+        self.dropout_input = nn.Dropout(cfg.dropout_input)
+        self.dropout_features = nn.Dropout(cfg.dropout_features)
+
+        self.feature_grad_mult = cfg.feature_grad_mult
+
+        self.mask_emb = nn.Parameter(
+            torch.FloatTensor(cfg.encoder_embed_dim).uniform_()
+        )
+
+        self.encoder = TransformerEncoder(cfg)
+        self.layer_norm = LayerNorm(self.extractor_embed)
+
+        self.final_proj = nn.Linear(self.embed, self.embed)
+
+        self.num_updates = 0
+
+    def make_ema_teacher(self):
+        ema_config = EMAModuleConfig(
+            ema_decay=self.cfg.ema_decay,
+            ema_fp32=True,
+        )
+        skip_keys = set()
+        if self.cfg.ema_layers_only:
+            self.cfg.ema_transformer_only = True
+            for k, _ in self.encoder.pos_conv.named_parameters():
+                skip_keys.add(f"pos_conv.{k}")
+
+        self.ema = EMAModule(
+            self.encoder if self.cfg.ema_transformer_only else self,
+            ema_config,
+            skip_keys=skip_keys,
+        )
+
+    def set_num_updates(self, num_updates):
+        super().set_num_updates(num_updates)
+
+        if self.ema is None and self.final_proj is not None:
+            logger.info(f"making ema teacher")
+            self.make_ema_teacher()
+        elif self.training and self.ema is not None:
+            if self.cfg.ema_decay != self.cfg.ema_end_decay:
+                if num_updates >= self.cfg.ema_anneal_end_step:
+                    decay = self.cfg.ema_end_decay
+                else:
+                    decay = get_annealed_rate(
+                        self.cfg.ema_decay,
+                        self.cfg.ema_end_decay,
+                        num_updates,
+                        self.cfg.ema_anneal_end_step,
+                    )
+                self.ema.set_decay(decay)
+            if self.ema.get_decay() < 1:
+                self.ema.step(self.encoder if self.cfg.ema_transformer_only else self)
+
+        self.num_updates = num_updates
+
+    def state_dict(self, destination=None, prefix="", keep_vars=False):
+        state = super().state_dict(destination, prefix, keep_vars)
+
+        if self.ema is not None:
+            state[prefix + "_ema"] = self.ema.fp32_params
+
+        return state
+
+    def _load_from_state_dict(self, state_dict, prefix, *args, **kwargs):
+        if self.ema is not None:
+            k = prefix + "_ema"
+            assert k in state_dict
+            self.ema.restore(state_dict[k], True)
+            del state_dict[k]
+        return super()._load_from_state_dict(state_dict, prefix, *args, **kwargs)
+
+    @classmethod
+    def build_model(cls, cfg: Data2VecAudioConfig, task=None):
+        """Build a new model instance."""
+
+        return cls(cfg)
+
+    def apply_mask(
+        self,
+        x,
+        padding_mask,
+        mask_indices=None,
+        mask_channel_indices=None,
+    ):
+        B, T, C = x.shape
+
+        if self.mask_channel_prob > 0 and self.mask_channel_before:
+            mask_channel_indices = compute_mask_indices(
+                (B, C),
+                None,
+                self.mask_channel_prob,
+                self.mask_channel_length,
+                self.mask_channel_selection,
+                self.mask_channel_other,
+                no_overlap=self.no_mask_channel_overlap,
+                min_space=self.mask_channel_min_space,
+            )
+            mask_channel_indices = (
+                torch.from_numpy(mask_channel_indices)
+                .to(x.device)
+                .unsqueeze(1)
+                .expand(-1, T, -1)
+            )
+            x[mask_channel_indices] = 0
+
+        if self.mask_prob > 0:
+            if mask_indices is None:
+                mask_indices = compute_mask_indices(
+                    (B, T),
+                    padding_mask,
+                    self.mask_prob,
+                    self.mask_length,
+                    self.mask_selection,
+                    self.mask_other,
+                    min_masks=1,
+                    no_overlap=self.no_mask_overlap,
+                    min_space=self.mask_min_space,
+                    require_same_masks=self.cfg.require_same_masks,
+                    mask_dropout=self.cfg.mask_dropout,
+                )
+                mask_indices = torch.from_numpy(mask_indices).to(x.device)
+            x = index_put(x, mask_indices, self.mask_emb)
+        else:
+            mask_indices = None
+
+        if self.mask_channel_prob > 0 and not self.mask_channel_before:
+            if mask_channel_indices is None:
+                mask_channel_indices = compute_mask_indices(
+                    (B, C),
+                    None,
+                    self.mask_channel_prob,
+                    self.mask_channel_length,
+                    self.mask_channel_selection,
+                    self.mask_channel_other,
+                    no_overlap=self.no_mask_channel_overlap,
+                    min_space=self.mask_channel_min_space,
+                )
+                mask_channel_indices = (
+                    torch.from_numpy(mask_channel_indices)
+                    .to(x.device)
+                    .unsqueeze(1)
+                    .expand(-1, T, -1)
+                )
+            x = index_put(x, mask_channel_indices, 0)
+
+        return x, mask_indices
+
+    def _get_feat_extract_output_lengths(self, input_lengths: torch.LongTensor):
+        """
+        Computes the output length of the convolutional layers
+        """
+
+        def _conv_out_length(input_length, kernel_size, stride):
+            return torch.floor((input_length - kernel_size) / stride + 1)
+
+        conv_cfg_list = eval(self.cfg.conv_feature_layers)
+
+        for i in range(len(conv_cfg_list)):
+            input_lengths = _conv_out_length(
+                input_lengths, conv_cfg_list[i][1], conv_cfg_list[i][2]
+            )
+
+        return input_lengths.to(torch.long)
+
+    def forward(
+        self,
+        source,
+        padding_mask=None,
+        mask=True,
+        features_only=False,
+        layer=None,
+        mask_indices=None,
+        mask_channel_indices=None,
+        padding_count=None,
+    ):
+        features = source
+
+        if self.feature_grad_mult > 0:
+            features = self.feature_extractor(features)
+            if self.feature_grad_mult != 1.0:
+                features = GradMultiply.apply(features, self.feature_grad_mult)
+        else:
+            with torch.no_grad():
+                features = self.feature_extractor(features)
+
+        features = features.transpose(1, 2)
+
+        features = self.layer_norm(features)
+
+        orig_padding_mask = padding_mask
+
+        if padding_mask is not None and padding_mask.any():
+            input_lengths = (1 - padding_mask.long()).sum(-1)
+            # apply conv formula to get real output_lengths
+            output_lengths = self._get_feat_extract_output_lengths(input_lengths)
+
+            padding_mask = torch.zeros(
+                features.shape[:2], dtype=features.dtype, device=features.device
+            )
+
+            # these two operations makes sure that all values
+            # before the output lengths indices are attended to
+            padding_mask[
+                (
+                    torch.arange(padding_mask.shape[0], device=padding_mask.device),
+                    output_lengths - 1,
+                )
+            ] = 1
+            padding_mask = (1 - padding_mask.flip([-1]).cumsum(-1).flip([-1])).bool()
+        else:
+            padding_mask = None
+
+        if self.post_extract_proj is not None:
+            features = self.post_extract_proj(features)
+
+        pre_encoder_features = None
+        if self.cfg.ema_transformer_only:
+            pre_encoder_features = features.clone()
+
+        features = self.dropout_input(features)
+
+        if mask:
+            x, mask_indices = self.apply_mask(
+                features,
+                padding_mask,
+                mask_indices=mask_indices,
+                mask_channel_indices=mask_channel_indices,
+            )
+        else:
+            x = features
+            mask_indices = None
+
+        x, layer_results = self.encoder(
+            x,
+            padding_mask=padding_mask,
+            layer=layer,
+        )
+
+        if features_only:
+            return {
+                "x": x,
+                "padding_mask": padding_mask,
+                "layer_results": layer_results,
+            }
+
+        result = {
+            "losses": {},
+        }
+
+        with torch.no_grad():
+            self.ema.model.eval()
+
+            if self.cfg.ema_transformer_only:
+                y, layer_results = self.ema.model.extract_features(
+                    pre_encoder_features,
+                    padding_mask=padding_mask,
+                    min_layer=self.cfg.encoder_layers - self.average_top_k_layers,
+                )
+                y = {
+                    "x": y,
+                    "padding_mask": padding_mask,
+                    "layer_results": layer_results,
+                }
+            else:
+                y = self.ema.model.extract_features(
+                    source=source,
+                    padding_mask=orig_padding_mask,
+                    mask=False,
+                )
+
+            target_layer_results = [l[2] for l in y["layer_results"]]
+
+            permuted = False
+            if self.cfg.instance_norm_target_layer or self.cfg.batch_norm_target_layer:
+                target_layer_results = [
+                    tl.permute(1, 2, 0) for tl in target_layer_results  # TBC -> BCT
+                ]
+                permuted = True
+
+            if self.cfg.batch_norm_target_layer:
+                target_layer_results = [
+                    F.batch_norm(
+                        tl.float(), running_mean=None, running_var=None, training=True
+                    )
+                    for tl in target_layer_results
+                ]
+
+            if self.cfg.instance_norm_target_layer:
+                target_layer_results = [
+                    F.instance_norm(tl.float()) for tl in target_layer_results
+                ]
+
+            if permuted:
+                target_layer_results = [
+                    tl.transpose(1, 2) for tl in target_layer_results  # BCT -> BTC
+                ]
+
+            if self.cfg.group_norm_target_layer:
+                target_layer_results = [
+                    F.layer_norm(tl.float(), tl.shape[-2:])
+                    for tl in target_layer_results
+                ]
+
+            if self.cfg.layer_norm_target_layer:
+                target_layer_results = [
+                    F.layer_norm(tl.float(), tl.shape[-1:])
+                    for tl in target_layer_results
+                ]
+
+            y = sum(target_layer_results) / len(target_layer_results)
+
+            if self.cfg.layer_norm_targets:
+                y = F.layer_norm(y.float(), y.shape[-1:])
+
+            if self.cfg.instance_norm_targets:
+                y = F.instance_norm(y.float().transpose(1, 2)).transpose(1, 2)
+
+            if not permuted:
+                y = y.transpose(0, 1)
+
+            y = y[mask_indices]
+
+        x = x[mask_indices]
+        x = self.final_proj(x)
+
+        sz = x.size(-1)
+
+        if self.loss_beta == 0:
+            loss = F.mse_loss(x.float(), y.float(), reduction="none").sum(dim=-1)
+        else:
+            loss = F.smooth_l1_loss(
+                x.float(), y.float(), reduction="none", beta=self.loss_beta
+            ).sum(dim=-1)
+
+        if self.loss_scale is not None:
+            scale = self.loss_scale
+        else:
+            scale = 1 / math.sqrt(sz)
+
+        result["losses"]["regression"] = loss.sum() * scale
+
+        if "sample_size" not in result:
+            result["sample_size"] = loss.numel()
+
+        with torch.no_grad():
+            result["target_var"] = self.compute_var(y)
+            result["pred_var"] = self.compute_var(x.float())
+
+        if self.num_updates > 5000 and result["target_var"] < self.cfg.min_target_var:
+            logger.error(
+                f"target var is {result['target_var'].item()} < {self.cfg.min_target_var}, exiting"
+            )
+            raise Exception(
+                f"target var is {result['target_var'].item()} < {self.cfg.min_target_var}, exiting"
+            )
+        if self.num_updates > 5000 and result["pred_var"] < self.cfg.min_pred_var:
+            logger.error(
+                f"pred var is {result['pred_var'].item()} < {self.cfg.min_pred_var}, exiting"
+            )
+            raise Exception(
+                f"pred var is {result['pred_var'].item()} < {self.cfg.min_pred_var}, exiting"
+            )
+
+        if self.ema is not None:
+            result["ema_decay"] = self.ema.get_decay() * 1000
+
+        return result
+
+    @staticmethod
+    def compute_var(y):
+        y = y.view(-1, y.size(-1))
+        if dist.is_initialized():
+            zc = torch.tensor(y.size(0)).cuda()
+            zs = y.sum(dim=0)
+            zss = (y ** 2).sum(dim=0)
+
+            dist.all_reduce(zc)
+            dist.all_reduce(zs)
+            dist.all_reduce(zss)
+
+            var = zss / (zc - 1) - (zs ** 2) / (zc * (zc - 1))
+            return torch.sqrt(var + 1e-6).mean()
+        else:
+            return torch.sqrt(y.var(dim=0) + 1e-6).mean()
+
+    def extract_features(
+        self, source, padding_mask, mask=False, layer=None
+    ):
+        res = self.forward(
+            source,
+            padding_mask,
+            mask=mask,
+            features_only=True,
+            layer=layer,
+        )
+        return res
+
+    def remove_pretraining_modules(self, last_layer=None):
+        self.final_proj = None
+        self.ema = None
+        if last_layer is not None:
+            self.encoder.layers = nn.ModuleList(
+                l for i, l in enumerate(self.encoder.layers) if i <= last_layer
+            )

fairseq/examples/data2vec/models/data2vec_image_classification.py

@@ -0,0 +1,143 @@
+# Copyright (c) Facebook, Inc. and its affiliates.
+#
+# This source code is licensed under the MIT license found in the
+# LICENSE file in the root directory of this source tree.
+
+# The code in this file is adapted from the BeiT implementation which can be found here:
+# https://github.com/microsoft/unilm/tree/master/beit
+
+import logging
+
+from dataclasses import dataclass
+from typing import Any
+
+from omegaconf import II, MISSING
+
+import torch
+import torch.nn as nn
+import torch.nn.functional as F
+
+from fairseq import checkpoint_utils, tasks
+
+from fairseq.dataclass import FairseqDataclass
+from fairseq.models import BaseFairseqModel, register_model
+
+
+logger = logging.getLogger(__name__)
+
+
+@dataclass
+class Data2VecImageClassificationConfig(FairseqDataclass):
+    model_path: str = MISSING
+    no_pretrained_weights: bool = False
+    num_classes: int = 1000
+    mixup: float = 0.8
+    cutmix: float = 1.0
+    label_smoothing: float = 0.1
+
+    pretrained_model_args: Any = None
+    data: str = II("task.data")
+
+
+@register_model(
+    "data2vec_image_classification", dataclass=Data2VecImageClassificationConfig
+)
+class Data2VecImageClassificationModel(BaseFairseqModel):
+    def __init__(self, cfg: Data2VecImageClassificationConfig):
+        super().__init__()
+        self.cfg = cfg
+
+        if cfg.pretrained_model_args is None:
+            state = checkpoint_utils.load_checkpoint_to_cpu(cfg.model_path, {})
+            pretrained_args = state.get("cfg", None)
+            pretrained_args.criterion = None
+            pretrained_args.lr_scheduler = None
+            cfg.pretrained_model_args = pretrained_args
+
+            logger.info(pretrained_args)
+        else:
+            state = None
+            pretrained_args = cfg.pretrained_model_args
+
+        pretrained_args.task.data = cfg.data
+        task = tasks.setup_task(pretrained_args.task)
+        model = task.build_model(pretrained_args.model, from_checkpoint=True)
+
+        model.remove_pretraining_modules()
+
+        self.model = model
+
+        if state is not None and not cfg.no_pretrained_weights:
+            self.load_model_weights(state, model, cfg)
+
+        self.fc_norm = nn.LayerNorm(pretrained_args.model.embed_dim)
+        self.head = nn.Linear(pretrained_args.model.embed_dim, cfg.num_classes)
+
+        self.head.weight.data.mul_(1e-3)
+        self.head.bias.data.mul_(1e-3)
+
+        self.mixup_fn = None
+
+        if cfg.mixup > 0 or cfg.cutmix > 0:
+            from timm.data import Mixup
+
+            self.mixup_fn = Mixup(
+                mixup_alpha=cfg.mixup,
+                cutmix_alpha=cfg.cutmix,
+                cutmix_minmax=None,
+                prob=1.0,
+                switch_prob=0.5,
+                mode="batch",
+                label_smoothing=cfg.label_smoothing,
+                num_classes=cfg.num_classes,
+            )
+
+    def load_model_weights(self, state, model, cfg):
+        if "_ema" in state["model"]:
+            del state["model"]["_ema"]
+        model.load_state_dict(state["model"], strict=True)
+
+    @classmethod
+    def build_model(cls, cfg: Data2VecImageClassificationConfig, task=None):
+        """Build a new model instance."""
+
+        return cls(cfg)
+
+    def forward(
+        self,
+        img,
+        label=None,
+    ):
+        if self.training and self.mixup_fn is not None and label is not None:
+            img, label = self.mixup_fn(img, label)
+
+        x = self.model(img, mask=False)
+        x = x[:, 1:]
+        x = self.fc_norm(x.mean(1))
+        x = self.head(x)
+
+        if label is None:
+            return x
+
+        if self.training and self.mixup_fn is not None:
+            loss = -label * F.log_softmax(x.float(), dim=-1)
+        else:
+            loss = F.cross_entropy(
+                x.float(),
+                label,
+                label_smoothing=self.cfg.label_smoothing if self.training else 0,
+                reduction="none",
+            )
+
+        result = {
+            "losses": {"regression": loss},
+            "sample_size": img.size(0),
+        }
+
+        if not self.training:
+            with torch.no_grad():
+                pred = x.argmax(-1)
+                correct = (pred == label).sum()
+                result["correct"] = correct
+
+        return result

fairseq/examples/data2vec/models/data2vec_text.py

@@ -0,0 +1,517 @@
+# Copyright (c) Facebook, Inc. and its affiliates.
+#
+# This source code is licensed under the MIT license found in the
+# LICENSE file in the root directory of this source tree.
+
+from dataclasses import dataclass, field
+from typing import Optional
+import logging
+import math
+
+import torch
+import torch.nn as nn
+import torch.nn.functional as F
+
+from omegaconf import II
+
+from fairseq.dataclass import FairseqDataclass
+from fairseq.modules import EMAModule, EMAModuleConfig
+from fairseq.models import (
+    FairseqEncoder,
+    FairseqEncoderModel,
+    register_model,
+)
+from fairseq.models.roberta.model import RobertaLMHead, RobertaClassificationHead
+from fairseq.models.transformer import TransformerEncoder, TransformerConfig
+from fairseq.modules.transformer_sentence_encoder import init_bert_params
+
+logger = logging.getLogger(__name__)
+
+
+@dataclass
+class Data2VecTextConfig(FairseqDataclass):
+    max_positions: int = II("task.tokens_per_sample")
+
+    head_layers: int = 1
+
+    transformer: TransformerConfig = TransformerConfig()
+
+    load_checkpoint_heads: bool = field(
+        default=False,
+        metadata={"help": "(re-)register and load heads when loading checkpoints"},
+    )
+
+    loss_beta: float = field(
+        default=0, metadata={"help": "beta for smooth l1 loss. 0 means use l2 loss"}
+    )
+    loss_scale: Optional[float] = field(
+        default=None,
+        metadata={
+            "help": "scale the reconstruction loss by this constant. if None then scales by 1/sqrt(dim)"
+        },
+    )
+    average_top_k_layers: int = field(
+        default=8, metadata={"help": "how many layers to average"}
+    )
+
+    layer_norm_target_layer: bool = False
+    instance_norm_target_layer: bool = False
+    batch_norm_target_layer: bool = False
+    instance_norm_targets: bool = False
+    layer_norm_targets: bool = False
+
+    ema_decay: float = field(default=0.999, metadata={"help": "initial ema decay rate"})
+    ema_end_decay: float = field(
+        default=0.9999, metadata={"help": "final ema decay rate"}
+    )
+
+    # when to finish annealing ema decay rate
+    ema_anneal_end_step: int = II("optimization.max_update")
+
+    ema_transformer_layers_only: bool = field(
+        default=True,
+        metadata={"help": "whether to momentum update only the transformer layers"},
+    )
+
+
+def get_annealed_rate(start, end, curr_step, total_steps):
+    r = end - start
+    pct_remaining = 1 - curr_step / total_steps
+    return end - r * pct_remaining
+
+
+@register_model("data2vec_text", dataclass=Data2VecTextConfig)
+class Data2VecTextModel(FairseqEncoderModel):
+    def __init__(self, cfg: Data2VecTextConfig, encoder):
+        super().__init__(encoder)
+        self.cfg = cfg
+
+        # We follow BERT's random weight initialization
+        self.apply(init_bert_params)
+
+        self.classification_heads = nn.ModuleDict()
+
+    @classmethod
+    def build_model(cls, cfg, task):
+        """Build a new model instance."""
+
+        encoder = Data2VecTextEncoder(cfg, task.source_dictionary, task.cfg.data)
+
+        return cls(cfg, encoder)
+
+    def forward(
+        self,
+        src_tokens,
+        target_tokens=None,
+        features_only=False,
+        return_all_hiddens=False,
+        classification_head_name=None,
+        **kwargs,
+    ):
+        if classification_head_name is not None:
+            features_only = True
+
+        res = self.encoder(
+            src_tokens, target_tokens, features_only, return_all_hiddens, **kwargs
+        )
+
+        if isinstance(res, tuple):
+            x, extra = res
+        else:
+            return res
+
+        if classification_head_name is not None:
+            x = self.classification_heads[classification_head_name](x)
+        return x, extra
+
+    def get_normalized_probs(self, net_output, log_probs, sample=None):
+        """Get normalized probabilities (or log probs) from a net's output."""
+        logits = net_output[0].float()
+        if log_probs:
+            return F.log_softmax(logits, dim=-1)
+        else:
+            return F.softmax(logits, dim=-1)
+
+    def register_classification_head(
+        self, name, num_classes=None, inner_dim=None, **kwargs
+    ):
+        """Register a classification head."""
+        if name in self.classification_heads:
+            prev_num_classes = self.classification_heads[name].out_proj.out_features
+            prev_inner_dim = self.classification_heads[name].dense.out_features
+            if num_classes != prev_num_classes or inner_dim != prev_inner_dim:
+                logger.warning(
+                    're-registering head "{}" with num_classes {} (prev: {}) '
+                    "and inner_dim {} (prev: {})".format(
+                        name, num_classes, prev_num_classes, inner_dim, prev_inner_dim
+                    )
+                )
+        self.classification_heads[name] = RobertaClassificationHead(
+            input_dim=self.cfg.transformer.encoder.embed_dim,
+            inner_dim=inner_dim or self.cfg.transformer.encoder.embed_dim,
+            num_classes=num_classes,
+            activation_fn="tanh",
+            pooler_dropout=0,
+        )
+
+    @property
+    def supported_targets(self):
+        return {"self"}
+
+    def upgrade_state_dict_named(self, state_dict, name):
+        prefix = name + "." if name != "" else ""
+
+        # rename decoder -> encoder before upgrading children modules
+        for k in list(state_dict.keys()):
+            if k.startswith(prefix + "decoder"):
+                new_k = prefix + "encoder" + k[len(prefix + "decoder") :]
+                state_dict[new_k] = state_dict[k]
+                del state_dict[k]
+
+        # rename emb_layer_norm -> layernorm_embedding
+        for k in list(state_dict.keys()):
+            if ".emb_layer_norm." in k:
+                new_k = k.replace(".emb_layer_norm.", ".layernorm_embedding.")
+                state_dict[new_k] = state_dict[k]
+                del state_dict[k]
+
+            if self.encoder.regression_head is not None:
+                if ".lm_head." in k:
+                    new_k = k.replace(".lm_head.", ".regression_head.")
+                    state_dict[new_k] = state_dict[k]
+                    del state_dict[k]
+            else:
+                if ".regression_head." in k:
+                    del state_dict[k]
+
+        # upgrade children modules
+        super().upgrade_state_dict_named(state_dict, name)
+
+        # Handle new classification heads present in the state dict.
+        current_head_names = (
+            []
+            if not hasattr(self, "classification_heads")
+            or self.classification_heads is None
+            else self.classification_heads.keys()
+        )
+        keys_to_delete = []
+        for k in state_dict.keys():
+            if not k.startswith(prefix + "classification_heads."):
+                continue
+
+            head_name = k[len(prefix + "classification_heads.") :].split(".")[0]
+            num_classes = state_dict[
+                prefix + "classification_heads." + head_name + ".out_proj.weight"
+            ].size(0)
+            inner_dim = state_dict[
+                prefix + "classification_heads." + head_name + ".dense.weight"
+            ].size(0)
+
+            if self.cfg.load_checkpoint_heads:
+                if head_name not in current_head_names:
+                    self.register_classification_head(head_name, num_classes, inner_dim)
+            else:
+                if head_name not in current_head_names:
+                    logger.warning(
+                        "deleting classification head ({}) from checkpoint "
+                        "not present in current model: {}".format(head_name, k)
+                    )
+                    keys_to_delete.append(k)
+                elif (
+                    num_classes
+                    != self.classification_heads[head_name].out_proj.out_features
+                    or inner_dim
+                    != self.classification_heads[head_name].dense.out_features
+                ):
+                    logger.warning(
+                        "deleting classification head ({}) from checkpoint "
+                        "with different dimensions than current model: {}".format(
+                            head_name, k
+                        )
+                    )
+                    keys_to_delete.append(k)
+        for k in keys_to_delete:
+            del state_dict[k]
+
+        # Copy any newly-added classification heads into the state dict
+        # with their current weights.
+        if (
+            hasattr(self, "classification_heads")
+            and self.classification_heads is not None
+            and len(self.classification_heads) > 0
+        ):
+            cur_state = self.classification_heads.state_dict()
+            for k, v in cur_state.items():
+                if prefix + "classification_heads." + k not in state_dict:
+                    logger.info("Overwriting " + prefix + "classification_heads." + k)
+                    state_dict[prefix + "classification_heads." + k] = v
+
+            for k in list(state_dict.keys()):
+                if k.startswith(prefix + "encoder.lm_head.") or k.startswith(
+                    prefix + "encoder.emb_head."
+                ):
+                    del state_dict[k]
+
+            self.encoder.lm_head = None
+
+        if self.encoder.target_model is None:
+            for k in list(state_dict.keys()):
+                if k.startswith(prefix + "encoder.target_model."):
+                    del state_dict[k]
+
+        if (self.encoder.ema is None) and (prefix + "encoder._ema" in state_dict):
+            del state_dict[prefix + "encoder._ema"]
+
+    def remove_pretraining_modules(self, last_layer=None):
+        self.encoder.lm_head = None
+        self.encoder.regression_head = None
+        self.encoder.ema = None
+        self.classification_heads = None
+
+        if last_layer is not None:
+            self.encoder.sentence_encoder.layers = nn.ModuleList(
+                l
+                for i, l in enumerate(self.encoder.sentence_encoder.layers)
+                if i <= last_layer
+            )
+            self.encoder.sentence_encoder.layer_norm = None
+
+
+class Data2VecTextEncoder(FairseqEncoder):
+    def __init__(self, cfg: Data2VecTextConfig, dictionary, task_data):
+        super().__init__(dictionary)
+
+        self.cfg = cfg
+
+        embed_tokens = self.build_embedding(
+            len(dictionary), cfg.transformer.encoder.embed_dim, dictionary.pad()
+        )
+
+        self.sentence_encoder = self.build_encoder(cfg, dictionary, embed_tokens)
+        self.mask_idx = dictionary.index("<mask>")
+        assert self.mask_idx != dictionary.unk(), dictionary.symbols
+
+        self.ema = None
+        self.average_top_k_layers = cfg.average_top_k_layers
+        self.loss_scale = cfg.loss_scale
+
+        assert self.cfg.head_layers >= 1
+
+        embed_dim = cfg.transformer.encoder.embed_dim
+        curr_dim = embed_dim
+        projs = []
+        for i in range(self.cfg.head_layers - 1):
+            next_dim = embed_dim * 2 if i == 0 else curr_dim
+            projs.append(nn.Linear(curr_dim, next_dim))
+            projs.append(nn.GELU())
+            curr_dim = next_dim
+
+        projs.append(nn.Linear(curr_dim, embed_dim))
+        self.regression_head = nn.Sequential(*projs)
+
+        self.num_updates = 0
+
+    def build_embedding(self, vocab_size, embedding_dim, padding_idx):
+        return nn.Embedding(vocab_size, embedding_dim, padding_idx)
+
+    def build_encoder(self, cfg, dictionary, embed_tokens):
+        encoder = TransformerEncoder(cfg.transformer, dictionary, embed_tokens, return_fc=True)
+        encoder.apply(init_bert_params)
+        return encoder
+
+    def build_lm_head(self, embed_dim, output_dim, activation_fn, weight):
+        return RobertaLMHead(embed_dim, output_dim, activation_fn, weight)
+
+    def make_ema_teacher(self):
+        ema_config = EMAModuleConfig(
+            ema_decay=self.cfg.ema_decay,
+            ema_fp32=True,
+        )
+        skip_keys = set()
+        if self.cfg.ema_transformer_layers_only:
+            for k, _ in self.sentence_encoder.embed_positions.named_parameters():
+                skip_keys.add(f"embed_tokens.{k}")
+            for k, _ in self.sentence_encoder.embed_positions.named_parameters():
+                skip_keys.add(f"embed_positions.{k}")
+            if self.sentence_encoder.layernorm_embedding is not None:
+                for (
+                    k,
+                    _,
+                ) in self.sentence_encoder.layernorm_embedding.named_parameters():
+                    skip_keys.add(f"layernorm_embedding.{k}")
+            if self.sentence_encoder.layer_norm is not None:
+                for k, _ in self.sentence_encoder.layer_norm.named_parameters():
+                    skip_keys.add(f"layernorm_embedding.{k}")
+
+        self.ema = EMAModule(
+            self.sentence_encoder,
+            ema_config,
+            skip_keys=skip_keys,
+        )
+
+    def set_num_updates(self, num_updates):
+        super().set_num_updates(num_updates)
+
+        if self.ema is None and self.regression_head is not None:
+            logger.info(f"making ema teacher")
+            self.make_ema_teacher()
+        elif self.training and self.ema is not None:
+            if self.cfg.ema_decay != self.cfg.ema_end_decay:
+                if num_updates >= self.cfg.ema_anneal_end_step:
+                    decay = self.cfg.ema_end_decay
+                else:
+                    decay = get_annealed_rate(
+                        self.cfg.ema_decay,
+                        self.cfg.ema_end_decay,
+                        num_updates,
+                        self.cfg.ema_anneal_end_step,
+                    )
+                self.ema.set_decay(decay)
+            if self.ema.get_decay() < 1:
+                self.ema.step(self.sentence_encoder)
+
+    def state_dict(self, destination=None, prefix="", keep_vars=False):
+        state = super().state_dict(destination, prefix, keep_vars)
+        if self.ema is not None:
+            state[prefix + "_ema"] = self.ema.fp32_params
+        return state
+
+    def _load_from_state_dict(self, state_dict, prefix, *args, **kwargs):
+        if self.ema is not None:
+            k = prefix + "_ema"
+            assert k in state_dict
+            self.ema.restore(state_dict[k], True)
+            del state_dict[k]
+        return super()._load_from_state_dict(state_dict, prefix, *args, **kwargs)
+
+    def forward(
+        self,
+        src_tokens,
+        target_tokens=None,
+        features_only=False,
+        return_all_hiddens=False,
+        masked_tokens=None,
+        **unused,
+    ):
+        """
+        Args:
+            src_tokens (LongTensor): input tokens of shape `(batch, src_len)`
+            features_only (bool, optional): skip LM head and just return
+                features. If True, the output will be of shape
+                `(batch, src_len, embed_dim)`.
+            return_all_hiddens (bool, optional): also return all of the
+                intermediate hidden states (default: False).
+
+        Returns:
+            tuple:
+                - the LM output of shape `(batch, src_len, vocab)`
+                - a dictionary of additional data, where 'inner_states'
+                  is a list of hidden states. Note that the hidden
+                  states have shape `(src_len, batch, vocab)`.
+        """
+
+        x, extra = self.extract_features(
+            src_tokens, return_all_hiddens=return_all_hiddens
+        )
+
+        if features_only:
+            return x, extra
+
+        assert target_tokens is not None
+
+        with torch.no_grad():
+            # use EMA parameter as the teacher
+            self.ema.model.eval()
+
+            encoder_out = self.ema.model(
+                target_tokens,
+                return_all_hiddens=True,
+            )
+            y = encoder_out["fc_results"]
+
+            y = y[-self.average_top_k_layers :]
+
+            permuted = False
+            if self.cfg.instance_norm_target_layer or self.cfg.batch_norm_target_layer:
+                y = [tl.permute(1, 2, 0) for tl in y]  # TBC -> BCT
+                permuted = True
+
+            if self.cfg.batch_norm_target_layer:
+                y = [
+                    F.batch_norm(
+                        tl.float(), running_mean=None, running_var=None, training=True
+                    )
+                    for tl in y
+                ]
+
+            if self.cfg.instance_norm_target_layer:
+                y = [F.instance_norm(tl.float()) for tl in y]
+
+            if permuted:
+                y = [tl.transpose(1, 2) for tl in y]  # BCT -> BTC
+
+            if self.cfg.layer_norm_target_layer:
+                y = [F.layer_norm(tl.float(), tl.shape[-1:]) for tl in y]
+
+            y = sum(y) / len(y)
+
+            if not permuted:
+                y = y.transpose(0, 1)
+
+            if self.cfg.layer_norm_targets:
+                y = F.layer_norm(y.float(), y.shape[-1:])
+
+            if self.cfg.instance_norm_targets:
+                y = F.instance_norm(y.transpose(1, 2)).transpose(1, 2)
+
+        masked_indices = src_tokens.eq(self.mask_idx)
+
+        x = x[masked_indices]
+        y = y[masked_indices]
+
+        x = self.regression_head(x)
+
+        sz = x.size(-1)
+        if self.cfg.loss_beta == 0:
+            loss = F.mse_loss(x.float(), y.float(), reduction="none").sum(dim=-1)
+        else:
+            loss = F.smooth_l1_loss(
+                x.float(), y.float(), reduction="none", beta=self.cfg.loss_beta
+            ).sum(dim=-1)
+
+        result = {
+            "losses": {
+                "main": loss.sum() / math.sqrt(sz)
+                if self.loss_scale <= 0
+                else loss.sum() * self.loss_scale,
+            },
+            "sample_size": loss.numel(),
+        }
+
+        # logging other values
+        other_logs = {
+            "ema_decay": self.ema.get_decay() * 1000
+        }
+        result["logs"] = other_logs
+        return result
+
+    def extract_features(self, src_tokens, return_all_hiddens=False, **kwargs):
+        encoder_out = self.sentence_encoder(
+            src_tokens,
+            return_all_hiddens=return_all_hiddens,
+            token_embeddings=kwargs.get("token_embeddings", None),
+        )
+        # T x B x C -> B x T x C
+        features = encoder_out["encoder_out"][0].transpose(0, 1)
+        inner_states = encoder_out["encoder_states"] if return_all_hiddens else None
+        return features, {
+            "inner_states": inner_states,
+            "encoder_embedding": encoder_out["encoder_embedding"][0],
+        }
+
+    def output_layer(self, features, masked_tokens=None, **unused):
+        return self.lm_head(features, masked_tokens)
+
+    def max_positions(self):
+        """Maximum output length supported by the encoder."""
+        return self.cfg.max_positions

fairseq/examples/data2vec/models/data2vec_text_classification.py

@@ -0,0 +1,141 @@
+# Copyright (c) Facebook, Inc. and its affiliates.
+#
+# This source code is licensed under the MIT license found in the
+# LICENSE file in the root directory of this source tree.
+
+# The code in this file is adapted from the BeiT implementation which can be found here:
+# https://github.com/microsoft/unilm/tree/master/beit
+
+import logging
+
+from dataclasses import dataclass
+from typing import Any
+
+from omegaconf import II, MISSING
+
+import torch
+import torch.nn as nn
+import torch.nn.functional as F
+
+from fairseq import checkpoint_utils, tasks
+
+from fairseq.dataclass import FairseqDataclass
+from fairseq.models import BaseFairseqModel, register_model
+from fairseq.models.roberta.model import RobertaClassificationHead
+
+from examples.data2vec.data.modality import Modality
+
+
+logger = logging.getLogger(__name__)
+
+
+@dataclass
+class Data2VecTextClassificationConfig(FairseqDataclass):
+    pooler_dropout: float = 0.0
+    pooler_activation_fn: str = "tanh"
+    quant_noise_pq: int = 0
+    quant_noise_pq_block_size: int = 8
+    spectral_norm_classification_head: bool = False
+
+    model_path: str = MISSING
+    no_pretrained_weights: bool = False
+
+    pretrained_model_args: Any = None
+
+
+@register_model(
+    "data2vec_text_classification", dataclass=Data2VecTextClassificationConfig
+)
+class Data2VecTextClassificationModel(BaseFairseqModel):
+    def __init__(self, cfg: Data2VecTextClassificationConfig):
+        super().__init__()
+        self.cfg = cfg
+
+        if cfg.pretrained_model_args is None:
+            state = checkpoint_utils.load_checkpoint_to_cpu(cfg.model_path, {})
+            pretrained_args = state.get("cfg", None)
+            pretrained_args.criterion = None
+            pretrained_args.lr_scheduler = None
+            cfg.pretrained_model_args = pretrained_args
+
+            logger.info(pretrained_args)
+        else:
+            state = None
+            pretrained_args = cfg.pretrained_model_args
+
+        task = tasks.setup_task(pretrained_args.task)
+        model = task.build_model(pretrained_args.model, from_checkpoint=True)
+
+        model.remove_pretraining_modules()
+
+        self.model = model
+
+        if state is not None and not cfg.no_pretrained_weights:
+            self.load_model_weights(state, model, cfg)
+
+        self.classification_heads = nn.ModuleDict()
+
+
+    def load_model_weights(self, state, model, cfg):
+        for k in list(state["model"].keys()):
+            if (
+                k.startswith("shared_decoder") or
+                k.startswith("_ema") or
+                "decoder" in k
+            ):
+                logger.info(f"Deleting {k} from checkpoint")
+                del state["model"][k]
+        model.load_state_dict(state["model"], strict=True)
+
+    @classmethod
+    def build_model(cls, cfg: Data2VecTextClassificationConfig, task=None):
+        """Build a new model instance."""
+
+        return cls(cfg)
+
+    def register_classification_head(
+        self, name, num_classes=None, inner_dim=None, **kwargs
+    ):
+        """Register a classification head."""
+        if name in self.classification_heads:
+            prev_num_classes = self.classification_heads[name].out_proj.out_features
+            prev_inner_dim = self.classification_heads[name].dense.out_features
+            if num_classes != prev_num_classes or inner_dim != prev_inner_dim:
+                logger.warning(
+                    're-registering head "{}" with num_classes {} (prev: {}) '
+                    "and inner_dim {} (prev: {})".format(
+                        name, num_classes, prev_num_classes, inner_dim, prev_inner_dim
+                    )
+                )
+        embed_dim = self.cfg.pretrained_model_args.model.embed_dim
+        self.classification_heads[name] = RobertaClassificationHead(
+            input_dim=embed_dim,
+            inner_dim=inner_dim or embed_dim,
+            num_classes=num_classes,
+            activation_fn=self.cfg.pooler_activation_fn,
+            pooler_dropout=self.cfg.pooler_dropout,
+            q_noise=self.cfg.quant_noise_pq,
+            qn_block_size=self.cfg.quant_noise_pq_block_size,
+            do_spectral_norm=self.cfg.spectral_norm_classification_head,
+        )
+
+    def forward(
+        self,
+        source,
+        id,
+        padding_mask,
+        features_only=True,
+        remove_extra_tokens=True,
+        classification_head_name=None,
+    ):
+        encoder_out = self.model(
+            source,
+            id=id,
+            mode=Modality.TEXT,
+            padding_mask=padding_mask,
+            mask=False,
+            features_only=features_only,
+            remove_extra_tokens=remove_extra_tokens
+        )
+        logits = self.classification_heads[classification_head_name](encoder_out["x"])
+        return logits, encoder_out

fairseq/examples/data2vec/models/data2vec_vision.py

@@ -0,0 +1,727 @@
+# Copyright (c) Facebook, Inc. and its affiliates.
+#
+# This source code is licensed under the MIT license found in the
+# LICENSE file in the root directory of this source tree.
+
+# The code in this file is adapted from the BeiT implementation which can be found here:
+# https://github.com/microsoft/unilm/tree/master/beit
+
+import logging
+import math
+import numpy as np
+import random
+
+from dataclasses import dataclass, field
+from typing import Optional
+
+from omegaconf import II
+
+import torch
+import torch.nn as nn
+import torch.nn.functional as F
+import torch.distributed as dist
+
+from fairseq.modules import EMAModule, EMAModuleConfig
+from fairseq.dataclass import FairseqDataclass
+from fairseq.models import BaseFairseqModel, register_model
+
+
+logger = logging.getLogger(__name__)
+
+
+@dataclass
+class Data2VecVisionConfig(FairseqDataclass):
+    layer_scale_init_value: float = field(
+        default=1e-4, metadata={"help": "rescale layer outputs, 0 to disable"}
+    )
+    num_mask_patches: int = field(
+        default=75,
+        metadata={"help": "number of the visual tokens/patches need be masked"},
+    )
+    min_mask_patches_per_block: int = 16
+    max_mask_patches_per_block: int = 196
+    image_size: int = 224
+    patch_size: int = 16
+    in_channels: int = 3
+
+    shared_rel_pos_bias: bool = True
+
+    drop_path: float = 0.1
+    attention_dropout: float = 0.0
+
+    depth: int = 12
+    embed_dim: int = 768
+    num_heads: int = 12
+    mlp_ratio: int = 4
+
+    loss_beta: float = field(
+        default=0, metadata={"help": "beta for smooth l1 loss. 0 means use l2 loss"}
+    )
+    loss_scale: Optional[float] = field(
+        default=None,
+        metadata={
+            "help": "scale the reconstruction loss by this constant. if None then scales by 1/sqrt(dim)"
+        },
+    )
+    average_top_k_layers: int = field(
+        default=8, metadata={"help": "how many layers to average"}
+    )
+
+    end_of_block_targets: bool = True
+    layer_norm_target_layer: bool = False
+    instance_norm_target_layer: bool = False
+    batch_norm_target_layer: bool = False
+    instance_norm_targets: bool = False
+    layer_norm_targets: bool = False
+
+    ema_decay: float = field(default=0.999, metadata={"help": "initial ema decay rate"})
+    ema_end_decay: float = field(
+        default=0.9999, metadata={"help": "final ema decay rate"}
+    )
+
+    # when to finish annealing ema decay rate
+    ema_anneal_end_step: int = II("optimization.max_update")
+
+    ema_transformer_only: bool = field(
+        default=True,
+        metadata={"help": "whether to momentum update only the transformer layers"},
+    )
+
+
+def get_annealed_rate(start, end, curr_step, total_steps):
+    r = end - start
+    pct_remaining = 1 - curr_step / total_steps
+    return end - r * pct_remaining
+
+
+@register_model("data2vec_vision", dataclass=Data2VecVisionConfig)
+class Data2VecVisionModel(BaseFairseqModel):
+    def __init__(self, cfg: Data2VecVisionConfig):
+        super().__init__()
+        self.cfg = cfg
+
+        self.ema = None
+
+        self.average_top_k_layers = cfg.average_top_k_layers
+        self.loss_beta = cfg.loss_beta
+        self.loss_scale = (
+            cfg.loss_scale
+            if cfg.loss_scale is not None
+            else 1 / math.sqrt(cfg.embed_dim)
+        )
+
+        self.patch_embed = PatchEmbed(
+            img_size=cfg.image_size,
+            patch_size=cfg.patch_size,
+            in_chans=cfg.in_channels,
+            embed_dim=cfg.embed_dim,
+        )
+
+        patch_size = self.patch_embed.patch_size
+        self.window_size = (
+            cfg.image_size // patch_size[0],
+            cfg.image_size // patch_size[1],
+        )
+
+        self.cls_emb = nn.Parameter(torch.FloatTensor(1, 1, cfg.embed_dim))
+        self.mask_emb = nn.Parameter(torch.FloatTensor(1, 1, cfg.embed_dim))
+
+        nn.init.trunc_normal_(self.cls_emb, 0.02)
+        nn.init.trunc_normal_(self.mask_emb, 0.02)
+
+        self.encoder = TransformerEncoder(cfg, self.patch_embed.patch_shape)
+
+        self.final_proj = nn.Linear(cfg.embed_dim, cfg.embed_dim)
+        self.num_updates = 0
+
+    def make_ema_teacher(self):
+        ema_config = EMAModuleConfig(
+            ema_decay=self.cfg.ema_decay,
+            ema_fp32=True,
+        )
+        self.ema = EMAModule(
+            self.encoder if self.cfg.ema_transformer_only else self,
+            ema_config,
+        )
+
+    def set_num_updates(self, num_updates):
+        super().set_num_updates(num_updates)
+
+        if self.ema is None and self.final_proj is not None:
+            logger.info(f"making ema teacher")
+            self.make_ema_teacher()
+        elif self.training and self.ema is not None:
+            if self.cfg.ema_decay != self.cfg.ema_end_decay:
+                if num_updates >= self.cfg.ema_anneal_end_step:
+                    decay = self.cfg.ema_end_decay
+                else:
+                    decay = get_annealed_rate(
+                        self.cfg.ema_decay,
+                        self.cfg.ema_end_decay,
+                        num_updates,
+                        self.cfg.ema_anneal_end_step,
+                    )
+                self.ema.set_decay(decay)
+            if self.ema.get_decay() < 1:
+                self.ema.step(self.encoder if self.cfg.ema_transformer_only else self)
+
+        self.num_updates = num_updates
+
+    def state_dict(self, destination=None, prefix="", keep_vars=False):
+        state = super().state_dict(destination, prefix, keep_vars)
+
+        if self.ema is not None:
+            state[prefix + "_ema"] = self.ema.fp32_params
+
+        return state
+
+    def _load_from_state_dict(self, state_dict, prefix, *args, **kwargs):
+        if self.ema is not None:
+            k = prefix + "_ema"
+            assert k in state_dict
+            self.ema.restore(state_dict[k], True)
+            del state_dict[k]
+        return super()._load_from_state_dict(state_dict, prefix, *args, **kwargs)
+
+    @classmethod
+    def build_model(cls, cfg: Data2VecVisionConfig, task=None):
+        """Build a new model instance."""
+
+        return cls(cfg)
+
+    def make_mask(self, bsz, num_masks, min_masks, max_masks):
+        height, width = self.window_size
+
+        masks = np.zeros(shape=(bsz, height, width), dtype=np.int)
+
+        for i in range(bsz):
+            mask = masks[i]
+            mask_count = 0
+
+            min_aspect = 0.3
+            max_aspect = 1 / min_aspect
+            log_aspect_ratio = (math.log(min_aspect), math.log(max_aspect))
+
+            def _mask(mask, max_mask_patches):
+                delta = 0
+                for attempt in range(10):
+                    target_area = random.uniform(min_masks, max_mask_patches)
+                    aspect_ratio = math.exp(random.uniform(*log_aspect_ratio))
+                    h = int(round(math.sqrt(target_area * aspect_ratio)))
+                    w = int(round(math.sqrt(target_area / aspect_ratio)))
+                    if w < width and h < height:
+                        top = random.randint(0, height - h)
+                        left = random.randint(0, width - w)
+
+                        num_masked = mask[top : top + h, left : left + w].sum()
+                        # Overlap
+                        if 0 < h * w - num_masked <= max_mask_patches:
+                            for i in range(top, top + h):
+                                for j in range(left, left + w):
+                                    if mask[i, j] == 0:
+                                        mask[i, j] = 1
+                                        delta += 1
+
+                        if delta > 0:
+                            break
+                return delta
+
+            while mask_count < num_masks:
+                max_mask_patches = min(num_masks - mask_count, max_masks)
+
+                delta = _mask(mask, max_mask_patches)
+                if delta == 0:
+                    break
+                else:
+                    mask_count += delta
+
+        return torch.from_numpy(masks)
+
+    def forward(
+        self,
+        img,
+        mask: bool = True,
+        layer_results: bool = False,
+    ):
+        x = self.patch_embed(img)
+        batch_size, seq_len, _ = x.size()
+
+        if mask:
+            mask_indices = self.make_mask(
+                img.size(0),
+                self.cfg.num_mask_patches,
+                self.cfg.min_mask_patches_per_block,
+                self.cfg.max_mask_patches_per_block,
+            )
+            bool_mask = mask_indices.view(mask_indices.size(0), -1).bool()
+        else:
+            mask_indices = bool_mask = None
+
+        cls_tokens = self.cls_emb.expand(batch_size, -1, -1)
+        x = torch.cat((cls_tokens, x), dim=1)
+
+        if self.ema is not None:
+            with torch.no_grad():
+                self.ema.model.eval()
+
+                if self.cfg.ema_transformer_only:
+                    y = self.ema.model(
+                        x,
+                        layer_results="end" if self.cfg.end_of_block_targets else "fc",
+                    )
+                else:
+                    y = self.ema.model(
+                        img,
+                        mask=False,
+                        layer_results=True,
+                    )
+
+            y = y[-self.cfg.average_top_k_layers :]
+
+            permuted = False
+            if self.cfg.instance_norm_target_layer or self.cfg.batch_norm_target_layer:
+                y = [tl.transpose(1, 2) for tl in y]  # BTC -> BCT
+                permuted = True
+
+            if self.cfg.batch_norm_target_layer:
+                y = [
+                    F.batch_norm(
+                        tl.float(), running_mean=None, running_var=None, training=True
+                    )
+                    for tl in y
+                ]
+
+            if self.cfg.instance_norm_target_layer:
+                y = [F.instance_norm(tl.float()) for tl in y]
+
+            if permuted:
+                y = [tl.transpose(1, 2) for tl in y]  # BCT -> BTC
+
+            if self.cfg.layer_norm_target_layer:
+                y = [F.layer_norm(tl.float(), tl.shape[-1:]) for tl in y]
+
+            y = sum(y) / len(y)
+
+            if self.cfg.layer_norm_targets:
+                y = F.layer_norm(y.float(), y.shape[-1:])
+
+            if self.cfg.instance_norm_targets:
+                y = F.instance_norm(y.float().transpose(1, 2)).transpose(1, 2)
+
+            y = y[bool_mask].float()
+
+        if mask_indices is not None:
+            mask_token = self.mask_emb.expand(batch_size, seq_len, -1)
+            w = mask_indices.view(mask_indices.size(0), -1, 1).type_as(mask_token)
+            x[:, 1:] = x[:, 1:] * (1 - w) + mask_token * w
+
+        if layer_results:
+            enc_layer_results = "end" if self.cfg.end_of_block_targets else "fc"
+        else:
+            enc_layer_results = None
+
+        x = self.encoder(x, layer_results=enc_layer_results)
+        if layer_results or mask_indices is None:
+            return x
+
+        x = x[bool_mask].float()
+
+        if self.loss_beta == 0:
+            loss = F.mse_loss(x, y, reduction="none").sum(dim=-1)
+        else:
+            loss = F.smooth_l1_loss(x, y, reduction="none", beta=self.loss_beta).sum(
+                dim=-1
+            )
+
+        if self.loss_scale > 0:
+            loss = loss * self.loss_scale
+
+        result = {
+            "losses": {"regression": loss.sum()},
+            "sample_size": loss.numel(),
+            "target_var": self.compute_var(y),
+            "pred_var": self.compute_var(x),
+            "ema_decay": self.ema.get_decay() * 1000,
+        }
+        return result
+
+    @staticmethod
+    def compute_var(y):
+        y = y.view(-1, y.size(-1))
+        if dist.is_initialized():
+            zc = torch.tensor(y.size(0)).cuda()
+            zs = y.sum(dim=0)
+            zss = (y ** 2).sum(dim=0)
+
+            dist.all_reduce(zc)
+            dist.all_reduce(zs)
+            dist.all_reduce(zss)
+
+            var = zss / (zc - 1) - (zs ** 2) / (zc * (zc - 1))
+            return torch.sqrt(var + 1e-6).mean()
+        else:
+            return torch.sqrt(y.var(dim=0) + 1e-6).mean()
+
+    def remove_pretraining_modules(self, last_layer=None):
+        self.final_proj = None
+        self.ema = None
+        self.encoder.norm = nn.Identity()
+        self.mask_emb = None
+        if last_layer is not None:
+            self.encoder.layers = nn.ModuleList(
+                l for i, l in enumerate(self.encoder.layers) if i <= last_layer
+            )
+
+
+class PatchEmbed(nn.Module):
+    """Image to Patch Embedding"""
+
+    def __init__(self, img_size=224, patch_size=16, in_chans=3, embed_dim=768):
+        super().__init__()
+        if isinstance(img_size, int):
+            img_size = img_size, img_size
+        if isinstance(patch_size, int):
+            patch_size = patch_size, patch_size
+        num_patches = (img_size[1] // patch_size[1]) * (img_size[0] // patch_size[0])
+        self.patch_shape = (img_size[0] // patch_size[0], img_size[1] // patch_size[1])
+        self.img_size = img_size
+        self.patch_size = patch_size
+        self.num_patches = num_patches
+
+        self.conv = nn.Conv2d(
+            in_chans, embed_dim, kernel_size=patch_size, stride=patch_size
+        )
+
+    def forward(self, x):
+        # BCHW -> BTC
+        x = self.conv(x).flatten(2).transpose(1, 2)
+        return x
+
+
+class Attention(nn.Module):
+    def __init__(
+        self,
+        dim,
+        num_heads=8,
+        qkv_bias=True,
+        attn_drop=0.0,
+        proj_drop=0.0,
+        window_size=None,
+        attn_head_dim=None,
+    ):
+        super().__init__()
+        self.num_heads = num_heads
+        head_dim = dim // num_heads
+        if attn_head_dim is not None:
+            head_dim = attn_head_dim
+        all_head_dim = head_dim * self.num_heads
+        self.scale = head_dim ** -0.5
+
+        self.qkv = nn.Linear(dim, all_head_dim * 3, bias=False)
+        if qkv_bias:
+            self.q_bias = nn.Parameter(torch.zeros(all_head_dim))
+            self.v_bias = nn.Parameter(torch.zeros(all_head_dim))
+        else:
+            self.q_bias = None
+            self.v_bias = None
+
+        if window_size:
+            self.window_size = window_size
+            self.num_relative_distance = (2 * window_size[0] - 1) * (
+                2 * window_size[1] - 1
+            ) + 3
+            self.relative_position_bias_table = nn.Parameter(
+                torch.zeros(self.num_relative_distance, num_heads)
+            )  # 2*Wh-1 * 2*Ww-1, nH
+            # cls to token & token 2 cls & cls to cls
+
+            # get pair-wise relative position index for each token inside the window
+            coords_h = torch.arange(window_size[0])
+            coords_w = torch.arange(window_size[1])
+            coords = torch.stack(torch.meshgrid([coords_h, coords_w]))  # 2, Wh, Ww
+            coords_flatten = torch.flatten(coords, 1)  # 2, Wh*Ww
+            relative_coords = (
+                coords_flatten[:, :, None] - coords_flatten[:, None, :]
+            )  # 2, Wh*Ww, Wh*Ww
+            relative_coords = relative_coords.permute(
+                1, 2, 0
+            ).contiguous()  # Wh*Ww, Wh*Ww, 2
+            relative_coords[:, :, 0] += window_size[0] - 1  # shift to start from 0
+            relative_coords[:, :, 1] += window_size[1] - 1
+            relative_coords[:, :, 0] *= 2 * window_size[1] - 1
+            relative_position_index = torch.zeros(
+                size=(window_size[0] * window_size[1] + 1,) * 2,
+                dtype=relative_coords.dtype,
+            )
+            relative_position_index[1:, 1:] = relative_coords.sum(-1)  # Wh*Ww, Wh*Ww
+            relative_position_index[0, 0:] = self.num_relative_distance - 3
+            relative_position_index[0:, 0] = self.num_relative_distance - 2
+            relative_position_index[0, 0] = self.num_relative_distance - 1
+
+            self.register_buffer("relative_position_index", relative_position_index)
+        else:
+            self.window_size = None
+            self.relative_position_bias_table = None
+            self.relative_position_index = None
+
+        self.attn_drop = nn.Dropout(attn_drop)
+        self.proj = nn.Linear(all_head_dim, dim)
+        self.proj_drop = nn.Dropout(proj_drop)
+
+    def forward(self, x, rel_pos_bias=None):
+        B, N, C = x.shape
+        qkv_bias = None
+        if self.q_bias is not None:
+            qkv_bias = torch.cat(
+                (
+                    self.q_bias,
+                    torch.zeros_like(self.v_bias, requires_grad=False),
+                    self.v_bias,
+                )
+            )
+        # qkv = self.qkv(x).reshape(B, N, 3, self.num_heads, C // self.num_heads).permute(2, 0, 3, 1, 4)
+        qkv = F.linear(input=x, weight=self.qkv.weight, bias=qkv_bias)
+        qkv = qkv.reshape(B, N, 3, self.num_heads, -1).permute(2, 0, 3, 1, 4)
+        q, k, v = (
+            qkv[0],
+            qkv[1],
+            qkv[2],
+        )  # make torchscript happy (cannot use tensor as tuple)
+
+        q = q * self.scale
+        attn = q @ k.transpose(-2, -1)
+
+        if self.relative_position_bias_table is not None:
+            assert 1==2
+            relative_position_bias = self.relative_position_bias_table[
+                self.relative_position_index.view(-1)
+            ].view(
+                self.window_size[0] * self.window_size[1] + 1,
+                self.window_size[0] * self.window_size[1] + 1,
+                -1,
+            )  # Wh*Ww,Wh*Ww,nH
+            relative_position_bias = relative_position_bias.permute(
+                2, 0, 1
+            ).contiguous()  # nH, Wh*Ww, Wh*Ww
+            attn = attn + relative_position_bias.unsqueeze(0)
+        print("attn.size() :", attn.size())
+        print("rel_pos_bias.size() :", rel_pos_bias.size())
+        if rel_pos_bias is not None:
+            attn = attn + rel_pos_bias
+        attn = attn.softmax(dim=-1)
+        attn = self.attn_drop(attn)
+
+        x = (attn @ v).transpose(1, 2).reshape(B, N, -1)
+        x = self.proj(x)
+        x = self.proj_drop(x)
+        return x
+
+
+class RelativePositionBias(nn.Module):
+    def __init__(self, window_size, num_heads):
+        super().__init__()
+        self.window_size = window_size
+        self.num_relative_distance = (2 * window_size[0] - 1) * (
+            2 * window_size[1] - 1
+        ) + 3
+        self.relative_position_bias_table = nn.Parameter(
+            torch.zeros(self.num_relative_distance, num_heads)
+        )
+
+        # get pair-wise relative position index for each token inside the window
+        coords_h = torch.arange(window_size[0])
+        coords_w = torch.arange(window_size[1])
+        coords = torch.stack(torch.meshgrid([coords_h, coords_w]))  # 2, Wh, Ww
+        coords_flatten = torch.flatten(coords, 1)  # 2, Wh*Ww
+        relative_coords = (
+            coords_flatten[:, :, None] - coords_flatten[:, None, :]
+        )  # 2, Wh*Ww, Wh*Ww
+        relative_coords = relative_coords.permute(
+            1, 2, 0
+        ).contiguous()  # Wh*Ww, Wh*Ww, 2
+        relative_coords[:, :, 0] += window_size[0] - 1  # shift to start from 0
+        relative_coords[:, :, 1] += window_size[1] - 1
+        relative_coords[:, :, 0] *= 2 * window_size[1] - 1
+        relative_position_index = torch.zeros(
+            size=(window_size[0] * window_size[1] + 1,) * 2, dtype=relative_coords.dtype
+        )
+        relative_position_index[1:, 1:] = relative_coords.sum(-1)  # Wh*Ww, Wh*Ww
+        relative_position_index[0, 0:] = self.num_relative_distance - 3
+        relative_position_index[0:, 0] = self.num_relative_distance - 2
+        relative_position_index[0, 0] = self.num_relative_distance - 1
+
+        self.register_buffer("relative_position_index", relative_position_index)
+
+    def forward(self):
+        relative_position_bias = self.relative_position_bias_table[
+            self.relative_position_index.view(-1)
+        ].view(
+            self.window_size[0] * self.window_size[1] + 1,
+            self.window_size[0] * self.window_size[1] + 1,
+            -1,
+        )  # Wh*Ww,Wh*Ww,nH
+        print("self.window_size :", self.window_size)
+        print("self.num_relative_distance :", self.num_relative_distance)
+        print("self.relative_position_index :", self.relative_position_index.size(), self.relative_position_index)
+        print("relative_position_bias.size(), relative_position_bias :",relative_position_bias.size(), relative_position_bias)
+        print("self.relative_position_bias_table.size(), self.relative_position_bias_table :",self.relative_position_bias_table.size(), self.relative_position_bias_table)
+        return relative_position_bias.permute(2, 0, 1).contiguous()  # nH, Wh*Ww, Wh*Ww
+
+
+class DropPath(nn.Module):
+    """Drop paths (Stochastic Depth) per sample  (when applied in main path of residual blocks)."""
+
+    def __init__(self, drop_prob=None):
+        super(DropPath, self).__init__()
+        self.drop_prob = drop_prob
+
+    def forward(self, x):
+        if self.drop_prob == 0.0 or not self.training:
+            return x
+        keep_prob = 1 - self.drop_prob
+        shape = (x.shape[0],) + (1,) * (
+            x.ndim - 1
+        )  # work with diff dim tensors, not just 2D ConvNets
+        random_tensor = keep_prob + torch.rand(shape, dtype=x.dtype, device=x.device)
+        random_tensor.floor_()
+        output = x.div(keep_prob) * random_tensor
+        return output
+
+    def extra_repr(self) -> str:
+        return "p={}".format(self.drop_prob)
+
+
+class Block(nn.Module):
+    def __init__(
+        self,
+        dim,
+        num_heads,
+        mlp_ratio=4.0,
+        drop=0.0,
+        attn_drop=0.0,
+        drop_path=0.0,
+        init_values=None,
+        window_size=None,
+    ):
+        super().__init__()
+
+        self.norm1 = nn.LayerNorm(dim)
+        self.attn = Attention(
+            dim,
+            num_heads=num_heads,
+            attn_drop=attn_drop,
+            proj_drop=drop,
+            window_size=window_size,
+        )
+
+        self.drop_path = DropPath(drop_path) if drop_path > 0.0 else nn.Identity()
+        self.norm2 = nn.LayerNorm(dim)
+        mlp_hidden_dim = int(dim * mlp_ratio)
+
+        self.mlp = nn.Sequential(
+            nn.Linear(dim, mlp_hidden_dim),
+            nn.GELU(),
+            nn.Linear(mlp_hidden_dim, dim),
+            nn.Dropout(drop),
+        )
+
+        if init_values > 0:
+            self.gamma_1 = nn.Parameter(
+                init_values * torch.ones((dim)), requires_grad=True
+            )
+            self.gamma_2 = nn.Parameter(
+                init_values * torch.ones((dim)), requires_grad=True
+            )
+        else:
+            self.gamma_1, self.gamma_2 = None, None
+
+    def forward(self, x, rel_pos_bias=None):
+        print("inside block :", x.size())
+        if self.gamma_1 is None:
+            x = x + self.drop_path(self.attn(self.norm1(x), rel_pos_bias=rel_pos_bias))
+            fc_feature = self.drop_path(self.mlp(self.norm2(x)))
+            x = x + fc_feature
+        else:
+            x = x + self.drop_path(
+                self.gamma_1 * self.attn(self.norm1(x), rel_pos_bias=rel_pos_bias)
+            )
+            fc_feature = self.drop_path(self.gamma_2 * self.mlp(self.norm2(x)))
+            x = x + fc_feature
+        return x, fc_feature
+
+
+class TransformerEncoder(nn.Module):
+    def __init__(self, cfg: Data2VecVisionConfig, patch_shape):
+        super().__init__()
+
+        self.rel_pos_bias = None
+        if cfg.shared_rel_pos_bias:
+            self.rel_pos_bias = RelativePositionBias(
+                window_size=patch_shape, num_heads=cfg.num_heads
+            )
+
+        dpr = [
+            x.item() for x in torch.linspace(0, cfg.drop_path, cfg.depth)
+        ]  # stochastic depth decay rule
+
+        print("TransformerEncoder > patch_shape :", patch_shape)
+        self.blocks = nn.ModuleList(
+            Block(
+                dim=cfg.embed_dim,
+                num_heads=cfg.num_heads,
+                attn_drop=cfg.attention_dropout,
+                drop_path=dpr[i],
+                init_values=cfg.layer_scale_init_value,
+                window_size=patch_shape if not cfg.shared_rel_pos_bias else None,
+            )
+            for i in range(cfg.depth)
+        )
+
+        self.norm = nn.LayerNorm(cfg.embed_dim)
+
+        self.apply(self.init_weights)
+        self.fix_init_weight()
+
+    def init_weights(self, m):
+        std = 0.02
+        if isinstance(m, nn.Linear):
+            nn.init.trunc_normal_(m.weight, std=std)
+            if isinstance(m, nn.Linear) and m.bias is not None:
+                nn.init.constant_(m.bias, 0)
+        elif isinstance(m, nn.LayerNorm):
+            nn.init.constant_(m.bias, 0)
+            nn.init.constant_(m.weight, 1.0)
+        elif isinstance(m, nn.Conv2d):
+            nn.init.trunc_normal_(m.weight, std=std)
+            if m.bias is not None:
+                nn.init.constant_(m.bias, 0)
+
+    def fix_init_weight(self):
+        def rescale(param, layer_id):
+            param.div_(math.sqrt(2.0 * layer_id))
+
+        for layer_id, layer in enumerate(self.blocks):
+            rescale(layer.attn.proj.weight.data, layer_id + 1)
+            rescale(layer.mlp[2].weight.data, layer_id + 1)
+
+    def extract_features(self, x, layer_results):
+
+        rel_pos_bias = self.rel_pos_bias() if self.rel_pos_bias is not None else None
+
+        z = []
+        for i, blk in enumerate(self.blocks):
+            x, fc_feature = blk(x, rel_pos_bias=rel_pos_bias)
+            if layer_results == "end":
+                z.append(x)
+            elif layer_results == "fc":
+                z.append(fc_feature)
+
+        return z if layer_results else self.norm(x)
+
+    def forward(self, x, layer_results=None):
+        x = self.extract_features(x, layer_results=layer_results)
+        if layer_results:
+            return [z[:, 1:] for z in x]
+
+        x = x[:, 1:]
+        return x

fairseq/examples/data2vec/models/mae.py

@@ -0,0 +1,829 @@
+# Copyright (c) Facebook, Inc. and its affiliates.
+#
+# This source code is licensed under the MIT license found in the
+# LICENSE file in the root directory of this source tree.
+
+# The code in this file is adapted from the BeiT implementation which can be found here:
+# https://github.com/microsoft/unilm/tree/master/beit
+
+import logging
+from dataclasses import dataclass
+from functools import partial
+
+from timm.models.vision_transformer import PatchEmbed, Block
+
+import torch
+import torch.nn as nn
+
+import numpy as np
+
+from fairseq.dataclass import FairseqDataclass
+from fairseq.models import BaseFairseqModel, register_model
+from fairseq.models.wav2vec.wav2vec2 import TransformerSentenceEncoderLayer
+
+try:
+    from apex.normalization import FusedLayerNorm
+except:
+    FusedLayerNorm = nn.LayerNorm
+
+import torch.nn.functional as F
+
+
+logger = logging.getLogger(__name__)
+
+
+@dataclass
+class MaeConfig(FairseqDataclass):
+    input_size: int = 224
+    in_chans: int = 3
+    patch_size: int = 16
+    embed_dim: int = 768
+    depth: int = 12
+    num_heads: int = 12
+    decoder_embed_dim: int = 512
+    decoder_depth: int = 8
+    decoder_num_heads: int = 16
+    mlp_ratio: int = 4
+    norm_eps: float = 1e-6
+
+    drop_path_rate: float = 0.0
+
+    mask_ratio: float = 0.75
+    norm_pix_loss: bool = True
+
+    w2v_block: bool = False
+    alt_block: bool = False
+    alt_block2: bool = False
+    alt_attention: bool = False
+    block_dropout: float = 0
+    attention_dropout: float = 0
+    activation_dropout: float = 0
+    layer_norm_first: bool = False
+
+    fused_ln: bool = True
+    end_of_block_targets: bool = True
+
+    no_decoder_embed: bool = False
+    no_decoder_pos_embed: bool = False
+    mask_noise_std: float = 0
+
+    single_qkv: bool = False
+    use_rel_pos_bias: bool = False
+    no_cls: bool = False
+
+
+def modify_relative_position_bias(orig_bias, bsz, mask):
+    if mask is None:
+        return orig_bias.unsqueeze(0).repeat(
+            bsz, 1, 1, 1
+        )  # heads x seq_len x seq_len => bsz x heads x seq_len x seq_len
+    heads, max_seq_len, max_seq_len = orig_bias.shape  # includes CLS token
+    mask_for_rel_pos_bias = torch.cat(
+        (torch.zeros(bsz, 1, dtype=mask.dtype, device=mask.device), mask), dim=1
+    ).bool()  # bsz x seqlen (add CLS token)
+    unmasked_for_rel_pos_bias = ~mask_for_rel_pos_bias
+    unmasked_for_rel_pos_bias = unmasked_for_rel_pos_bias.unsqueeze(1).repeat(
+        1, heads, 1
+    )  # bsz x seq_len => bsz x heads x seq_len
+    b_t_t_rel_pos_bias = orig_bias.unsqueeze(0).repeat(
+        bsz, 1, 1, 1
+    )  # heads x seq_len x seq_len => bsz x heads x seq_len x seq_len
+    b_t_t_rel_pos_bias = b_t_t_rel_pos_bias.masked_select(
+        unmasked_for_rel_pos_bias.unsqueeze(-1)
+    )
+    b_t_t_rel_pos_bias = b_t_t_rel_pos_bias.view(bsz, heads, -1, max_seq_len)
+    new_len = b_t_t_rel_pos_bias.size(-2)
+    b_t_t_rel_pos_bias = b_t_t_rel_pos_bias.masked_select(
+        unmasked_for_rel_pos_bias.unsqueeze(-2)
+    )
+    b_t_t_rel_pos_bias = b_t_t_rel_pos_bias.view(bsz, heads, new_len, new_len)
+    return b_t_t_rel_pos_bias
+
+
+class AltBlock(nn.Module):
+    def __init__(
+        self,
+        dim,
+        num_heads,
+        mlp_ratio=4.0,
+        qkv_bias=False,
+        qk_scale=None,
+        drop=0.0,
+        attn_drop=0.0,
+        drop_path=0.0,
+        act_layer=nn.GELU,
+        norm_layer=nn.LayerNorm,
+        layer_norm_first=True,
+        ffn_targets=False,
+        use_rel_pos_bias=False,
+        window_size=None,
+        alt_attention=False,
+    ):
+        super().__init__()
+
+        self.layer_norm_first = layer_norm_first
+        self.ffn_targets = ffn_targets
+
+        from timm.models.vision_transformer import Attention, DropPath, Mlp
+
+        self.norm1 = norm_layer(dim)
+        self.use_rel_pos_bias = use_rel_pos_bias
+        if use_rel_pos_bias:
+            self.attn = AltAttention(
+                dim,
+                num_heads=num_heads,
+                qkv_bias=qkv_bias,
+                qk_scale=qk_scale,
+                attn_drop=attn_drop,
+                proj_drop=drop,
+                window_size=window_size,
+            )
+        else:
+            if alt_attention:
+                from .multi.modules import AltAttention as AltAttention2
+                self.attn = AltAttention2(
+                    dim,
+                    num_heads=num_heads,
+                    qkv_bias=qkv_bias,
+                    qk_scale=qk_scale,
+                    attn_drop=attn_drop,
+                    proj_drop=drop,
+                )
+            else:
+                self.attn = Attention(
+                    dim,
+                    num_heads=num_heads,
+                    qkv_bias=qkv_bias,
+                    qk_scale=qk_scale,
+                    attn_drop=attn_drop,
+                    proj_drop=drop,
+                )
+        # NOTE: drop path for stochastic depth, we shall see if this is better than dropout here
+        self.drop_path = DropPath(drop_path) if drop_path > 0.0 else nn.Identity()
+        self.norm2 = norm_layer(dim)
+        mlp_hidden_dim = int(dim * mlp_ratio)
+        self.mlp = Mlp(
+            in_features=dim,
+            hidden_features=mlp_hidden_dim,
+            act_layer=act_layer,
+            drop=drop,
+        )
+
+    def forward(self, x, rel_pos_bias=None, pos_mask=None):
+        if self.layer_norm_first:
+            if self.use_rel_pos_bias:
+                x = x + self.drop_path(
+                    self.attn(
+                        self.norm1(x), rel_pos_bias=rel_pos_bias, pos_mask=pos_mask
+                    )
+                )
+            else:
+                x = x + self.drop_path(self.attn(self.norm1(x)))
+            t = self.mlp(self.norm2(x))
+            x = x + self.drop_path(t)
+            if not self.ffn_targets:
+                t = x
+            return x, t
+        else:
+            if self.use_rel_pos_bias:
+                x = x + self.drop_path(
+                    self.attn(x, rel_pos_bias=rel_pos_bias, pos_mask=pos_mask)
+                )
+            else:
+                x = x + self.drop_path(self.attn(x))
+            r = x = self.norm1(x)
+            x = self.mlp(x)
+            t = x
+            x = self.norm2(r + self.drop_path(x))
+            if not self.ffn_targets:
+                t = x
+            return x, t
+
+
+class AltAttention(nn.Module):
+    def __init__(
+        self,
+        dim,
+        num_heads=8,
+        qkv_bias=True,
+        qk_scale=None,
+        attn_drop=0.0,
+        proj_drop=0.0,
+        window_size=None,
+        attn_head_dim=None,
+    ):
+        super().__init__()
+        self.num_heads = num_heads
+        head_dim = dim // num_heads
+        if attn_head_dim is not None:
+            head_dim = attn_head_dim
+        all_head_dim = head_dim * self.num_heads
+        self.scale = qk_scale or head_dim ** -0.5
+
+        self.qkv = nn.Linear(dim, all_head_dim * 3, bias=False)
+        if qkv_bias:
+            self.q_bias = nn.Parameter(torch.zeros(all_head_dim))
+            self.v_bias = nn.Parameter(torch.zeros(all_head_dim))
+        else:
+            self.q_bias = None
+            self.v_bias = None
+
+        if window_size:
+            self.window_size = window_size
+            self.num_relative_distance = (2 * window_size[0] - 1) * (
+                2 * window_size[1] - 1
+            ) + 3
+            self.relative_position_bias_table = nn.Parameter(
+                torch.zeros(self.num_relative_distance, num_heads)
+            )  # 2*Wh-1 * 2*Ww-1, nH
+            # cls to token & token 2 cls & cls to cls
+
+            # get pair-wise relative position index for each token inside the window
+            coords_h = torch.arange(window_size[0])
+            coords_w = torch.arange(window_size[1])
+            coords = torch.stack(torch.meshgrid([coords_h, coords_w]))  # 2, Wh, Ww
+            coords_flatten = torch.flatten(coords, 1)  # 2, Wh*Ww
+            relative_coords = (
+                coords_flatten[:, :, None] - coords_flatten[:, None, :]
+            )  # 2, Wh*Ww, Wh*Ww
+            relative_coords = relative_coords.permute(
+                1, 2, 0
+            ).contiguous()  # Wh*Ww, Wh*Ww, 2
+            relative_coords[:, :, 0] += window_size[0] - 1  # shift to start from 0
+            relative_coords[:, :, 1] += window_size[1] - 1
+            relative_coords[:, :, 0] *= 2 * window_size[1] - 1
+            relative_position_index = torch.zeros(
+                size=(window_size[0] * window_size[1] + 1,) * 2,
+                dtype=relative_coords.dtype,
+            )
+            relative_position_index[1:, 1:] = relative_coords.sum(-1)  # Wh*Ww, Wh*Ww
+            relative_position_index[0, 0:] = self.num_relative_distance - 3
+            relative_position_index[0:, 0] = self.num_relative_distance - 2
+            relative_position_index[0, 0] = self.num_relative_distance - 1
+
+            self.register_buffer("relative_position_index", relative_position_index)
+        else:
+            self.window_size = None
+            self.relative_position_bias_table = None
+            self.relative_position_index = None
+
+        self.attn_drop = nn.Dropout(attn_drop)
+        self.proj = nn.Linear(all_head_dim, dim)
+        self.proj_drop = nn.Dropout(proj_drop)
+
+    def forward(self, x, rel_pos_bias=None, pos_mask=None):
+        B, N, C = x.shape
+        qkv_bias = None
+        if self.q_bias is not None:
+            qkv_bias = torch.cat(
+                (
+                    self.q_bias,
+                    torch.zeros_like(self.v_bias, requires_grad=False),
+                    self.v_bias,
+                )
+            )
+        # qkv = self.qkv(x).reshape(B, N, 3, self.num_heads, C // self.num_heads).permute(2, 0, 3, 1, 4)
+        qkv = F.linear(input=x, weight=self.qkv.weight, bias=qkv_bias)
+        qkv = qkv.reshape(B, N, 3, self.num_heads, -1).permute(2, 0, 3, 1, 4)
+        q, k, v = (
+            qkv[0],
+            qkv[1],
+            qkv[2],
+        )  # make torchscript happy (cannot use tensor as tuple)
+
+        q = q * self.scale
+        attn = q @ k.transpose(-2, -1)
+
+        if self.relative_position_bias_table is not None:
+            relative_position_bias = self.relative_position_bias_table[
+                self.relative_position_index.view(-1)
+            ].view(
+                self.window_size[0] * self.window_size[1] + 1,
+                self.window_size[0] * self.window_size[1] + 1,
+                -1,
+            )  # Wh*Ww,Wh*Ww,nH
+            relative_position_bias = relative_position_bias.permute(
+                2, 0, 1
+            ).contiguous()  # nH, Wh*Ww, Wh*Ww
+            attn = attn + modify_relative_position_bias(
+                relative_position_bias, x.size(0), pos_mask
+            )
+
+        if rel_pos_bias is not None:
+            attn = attn + rel_pos_bias
+
+        attn = attn.softmax(dim=-1)
+        attn = self.attn_drop(attn)
+
+        x = (attn @ v).transpose(1, 2).reshape(B, N, -1)
+        x = self.proj(x)
+        x = self.proj_drop(x)
+        return x
+
+
+class RelativePositionBias(nn.Module):
+    def __init__(self, window_size, num_heads):
+        super().__init__()
+        self.window_size = window_size
+        self.num_relative_distance = (2 * window_size[0] - 1) * (
+            2 * window_size[1] - 1
+        ) + 3
+        self.relative_position_bias_table = nn.Parameter(
+            torch.zeros(self.num_relative_distance, num_heads)
+        )
+
+        # get pair-wise relative position index for each token inside the window
+        coords_h = torch.arange(window_size[0])
+        coords_w = torch.arange(window_size[1])
+        coords = torch.stack(torch.meshgrid([coords_h, coords_w]))  # 2, Wh, Ww
+        coords_flatten = torch.flatten(coords, 1)  # 2, Wh*Ww
+        relative_coords = (
+            coords_flatten[:, :, None] - coords_flatten[:, None, :]
+        )  # 2, Wh*Ww, Wh*Ww
+        relative_coords = relative_coords.permute(
+            1, 2, 0
+        ).contiguous()  # Wh*Ww, Wh*Ww, 2
+        relative_coords[:, :, 0] += window_size[0] - 1  # shift to start from 0
+        relative_coords[:, :, 1] += window_size[1] - 1
+        relative_coords[:, :, 0] *= 2 * window_size[1] - 1
+        relative_position_index = torch.zeros(
+            size=(window_size[0] * window_size[1] + 1,) * 2, dtype=relative_coords.dtype
+        )
+        relative_position_index[1:, 1:] = relative_coords.sum(-1)  # Wh*Ww, Wh*Ww
+        relative_position_index[0, 0:] = self.num_relative_distance - 3
+        relative_position_index[0:, 0] = self.num_relative_distance - 2
+        relative_position_index[0, 0] = self.num_relative_distance - 1
+
+        self.register_buffer("relative_position_index", relative_position_index)
+
+    def forward(self):
+        relative_position_bias = self.relative_position_bias_table[
+            self.relative_position_index.view(-1)
+        ].view(
+            self.window_size[0] * self.window_size[1] + 1,
+            self.window_size[0] * self.window_size[1] + 1,
+            -1,
+        )  # Wh*Ww,Wh*Ww,nH
+        return relative_position_bias.permute(2, 0, 1).contiguous()  # nH, Wh*Ww, Wh*Ww
+
+
+def get_2d_sincos_pos_embed(embed_dim, grid_size, cls_token=False):
+    """
+    grid_size: int of the grid height and width
+    return:
+    pos_embed: [grid_size*grid_size, embed_dim] or [1+grid_size*grid_size, embed_dim] (w/ or w/o cls_token)
+    """
+    grid_h = np.arange(grid_size, dtype=np.float32)
+    grid_w = np.arange(grid_size, dtype=np.float32)
+    grid = np.meshgrid(grid_w, grid_h)  # here w goes first
+    grid = np.stack(grid, axis=0)
+
+    grid = grid.reshape([2, 1, grid_size, grid_size])
+    pos_embed = get_2d_sincos_pos_embed_from_grid(embed_dim, grid)
+    if cls_token:
+        pos_embed = np.concatenate([np.zeros([1, embed_dim]), pos_embed], axis=0)
+    return pos_embed
+
+
+def get_2d_sincos_pos_embed_from_grid(embed_dim, grid):
+    assert embed_dim % 2 == 0
+
+    # use half of dimensions to encode grid_h
+    emb_h = get_1d_sincos_pos_embed_from_grid(embed_dim // 2, grid[0])  # (H*W, D/2)
+    emb_w = get_1d_sincos_pos_embed_from_grid(embed_dim // 2, grid[1])  # (H*W, D/2)
+
+    emb = np.concatenate([emb_h, emb_w], axis=1)  # (H*W, D)
+    return emb
+
+
+def get_1d_sincos_pos_embed_from_grid(embed_dim, pos):
+    """
+    embed_dim: output dimension for each position
+    pos: a list of positions to be encoded: size (M,)
+    out: (M, D)
+    """
+    assert embed_dim % 2 == 0
+    omega = np.arange(embed_dim // 2, dtype=np.float)
+    omega /= embed_dim / 2.0
+    omega = 1.0 / 10000 ** omega  # (D/2,)
+
+    pos = pos.reshape(-1)  # (M,)
+    out = np.einsum("m,d->md", pos, omega)  # (M, D/2), outer product
+
+    emb_sin = np.sin(out)  # (M, D/2)
+    emb_cos = np.cos(out)  # (M, D/2)
+
+    emb = np.concatenate([emb_sin, emb_cos], axis=1)  # (M, D)
+    return emb
+
+
+def interpolate_pos_embed(model, checkpoint_model):
+    if "pos_embed" in checkpoint_model:
+        pos_embed_checkpoint = checkpoint_model["pos_embed"]
+        embedding_size = pos_embed_checkpoint.shape[-1]
+        num_patches = model.patch_embed.num_patches
+        num_extra_tokens = model.pos_embed.shape[-2] - num_patches
+        # height (== width) for the checkpoint position embedding
+        orig_size = int((pos_embed_checkpoint.shape[-2] - num_extra_tokens) ** 0.5)
+        # height (== width) for the new position embedding
+        new_size = int(num_patches ** 0.5)
+        # class_token and dist_token are kept unchanged
+        if orig_size != new_size:
+            print(
+                "Position interpolate from %dx%d to %dx%d"
+                % (orig_size, orig_size, new_size, new_size)
+            )
+            extra_tokens = pos_embed_checkpoint[:, :num_extra_tokens]
+            # only the position tokens are interpolated
+            pos_tokens = pos_embed_checkpoint[:, num_extra_tokens:]
+            pos_tokens = pos_tokens.reshape(
+                -1, orig_size, orig_size, embedding_size
+            ).permute(0, 3, 1, 2)
+            pos_tokens = torch.nn.functional.interpolate(
+                pos_tokens,
+                size=(new_size, new_size),
+                mode="bicubic",
+                align_corners=False,
+            )
+            pos_tokens = pos_tokens.permute(0, 2, 3, 1).flatten(1, 2)
+            new_pos_embed = torch.cat((extra_tokens, pos_tokens), dim=1)
+            checkpoint_model["pos_embed"] = new_pos_embed
+
+
+@register_model("mae", dataclass=MaeConfig)
+class MaeModel(BaseFairseqModel):
+    def __init__(self, cfg: MaeConfig):
+        super().__init__()
+        self.cfg = cfg
+
+        self.mask_ratio = cfg.mask_ratio
+
+        # --------------------------------------------------------------------------
+        # MAE encoder specifics
+        self.patch_embed = PatchEmbed(
+            cfg.input_size, cfg.patch_size, cfg.in_chans, cfg.embed_dim
+        )
+        num_patches = self.patch_embed.num_patches
+
+        self.cls_token = nn.Parameter(torch.zeros(1, 1, cfg.embed_dim)) if not cfg.no_cls else None
+        self.pos_embed = nn.Parameter(
+            torch.zeros(1, num_patches + int(not cfg.no_cls), cfg.embed_dim), requires_grad=False
+        )  # fixed sin-cos embedding
+
+        norm_layer = partial(nn.LayerNorm, eps=cfg.norm_eps)
+
+        dpr = [
+            x.item() for x in torch.linspace(0, cfg.drop_path_rate, cfg.depth)
+        ]  # stochastic depth decay rule
+
+        def make_block(drop_path):
+            if cfg.w2v_block:
+                return TransformerSentenceEncoderLayer(
+                    embedding_dim=cfg.embed_dim,
+                    ffn_embedding_dim=cfg.embed_dim * cfg.mlp_ratio,
+                    num_attention_heads=cfg.num_heads,
+                    dropout=cfg.block_dropout,
+                    attention_dropout=cfg.attention_dropout,
+                    activation_dropout=cfg.activation_dropout,
+                    activation_fn="gelu",
+                    layer_norm_first=cfg.layer_norm_first,
+                    drop_path=drop_path,
+                    norm_eps=1e-6,
+                    single_qkv=cfg.single_qkv,
+                    fused_ln=cfg.fused_ln,
+                )
+            elif cfg.alt_block:
+                window_size = (
+                    cfg.input_size // self.patch_embed.patch_size[0],
+                    cfg.input_size // self.patch_embed.patch_size[1],
+                )
+                return AltBlock(
+                    cfg.embed_dim,
+                    cfg.num_heads,
+                    cfg.mlp_ratio,
+                    qkv_bias=True,
+                    qk_scale=None,
+                    norm_layer=norm_layer,
+                    drop_path=drop_path,
+                    layer_norm_first=cfg.layer_norm_first,
+                    ffn_targets=not cfg.end_of_block_targets,
+                    use_rel_pos_bias=cfg.use_rel_pos_bias,
+                    window_size=window_size
+                    if (self.cfg.use_rel_pos_bias and not self.cfg.shared_rel_pos_bias)
+                    else None,
+                    alt_attention=cfg.alt_attention,
+                )
+            elif cfg.alt_block2:
+                from .multi.modules import AltBlock as AltBlock2
+                return AltBlock2(
+                    cfg.embed_dim,
+                    cfg.num_heads,
+                    cfg.mlp_ratio,
+                    qkv_bias=True,
+                    qk_scale=None,
+                    norm_layer=norm_layer,
+                    drop_path=drop_path,
+                    layer_norm_first=cfg.layer_norm_first,
+                    ffn_targets=not cfg.end_of_block_targets,
+                )
+            else:
+                return Block(
+                    cfg.embed_dim,
+                    cfg.num_heads,
+                    cfg.mlp_ratio,
+                    qkv_bias=True,
+                    qk_scale=None,
+                    norm_layer=norm_layer,
+                    drop_path=drop_path,
+                )
+
+        self.blocks = nn.ModuleList([make_block(dpr[i]) for i in range(cfg.depth)])
+        self.norm = norm_layer(cfg.embed_dim)
+        # --------------------------------------------------------------------------
+
+        # --------------------------------------------------------------------------
+        # MAE decoder specifics
+        self.decoder_embed = (
+            nn.Linear(cfg.embed_dim, cfg.decoder_embed_dim, bias=True)
+            if not cfg.no_decoder_embed
+            else None
+        )
+
+        self.mask_token = (
+            nn.Parameter(
+                torch.zeros(
+                    1,
+                    1,
+                    cfg.decoder_embed_dim
+                    if not cfg.no_decoder_embed
+                    else cfg.embed_dim,
+                )
+            )
+            if cfg.mask_noise_std <= 0
+            else None
+        )
+
+        self.decoder_pos_embed = (
+            nn.Parameter(
+                torch.zeros(
+                    1,
+                    num_patches + 1,
+                    cfg.decoder_embed_dim
+                    if not cfg.no_decoder_embed
+                    else cfg.embed_dim,
+                ),
+                requires_grad=False,
+            )
+            if not cfg.no_decoder_pos_embed
+            else None
+        )
+
+        self.decoder_blocks = nn.ModuleList(
+            [
+                Block(
+                    cfg.decoder_embed_dim,
+                    cfg.decoder_num_heads,
+                    cfg.mlp_ratio,
+                    qkv_bias=True,
+                    qk_scale=None,
+                    norm_layer=norm_layer,
+                )
+                for _ in range(cfg.decoder_depth)
+            ]
+        )
+
+        self.decoder_norm = norm_layer(cfg.decoder_embed_dim)
+        self.decoder_pred = nn.Linear(
+            cfg.decoder_embed_dim, cfg.patch_size ** 2 * cfg.in_chans, bias=True
+        )  # decoder to patch
+        # --------------------------------------------------------------------------
+
+        self.norm_pix_loss = cfg.norm_pix_loss
+
+        self.initialize_weights()
+
+        for pn, p in self.named_parameters():
+            if len(p.shape) == 1 or pn.endswith(".bias"):
+                p.param_group = "no_decay"
+            else:
+                p.param_group = "with_decay"
+
+    def initialize_weights(self):
+        # initialization
+        # initialize (and freeze) pos_embed by sin-cos embedding
+        pos_embed = get_2d_sincos_pos_embed(
+            self.pos_embed.shape[-1],
+            int(self.patch_embed.num_patches ** 0.5),
+            cls_token=not self.cfg.no_cls,
+        )
+        self.pos_embed.data.copy_(torch.from_numpy(pos_embed).float().unsqueeze(0))
+
+        if self.decoder_pos_embed is not None:
+            decoder_pos_embed = get_2d_sincos_pos_embed(
+                self.decoder_pos_embed.shape[-1],
+                int(self.patch_embed.num_patches ** 0.5),
+                cls_token=not self.cfg.no_cls,
+            )
+            self.decoder_pos_embed.data.copy_(
+                torch.from_numpy(decoder_pos_embed).float().unsqueeze(0)
+            )
+
+        # initialize patch_embed like nn.Linear (instead of nn.Conv2d)
+        w = self.patch_embed.proj.weight.data
+        torch.nn.init.xavier_uniform_(w.view([w.shape[0], -1]))
+
+        # timm's trunc_normal_(std=.02) is effectively normal_(std=0.02) as cutoff is too big (2.)
+        if self.cls_token is not None:
+            torch.nn.init.normal_(self.cls_token, std=0.02)
+
+        if self.mask_token is not None:
+            torch.nn.init.normal_(self.mask_token, std=0.02)
+
+        # initialize nn.Linear and nn.LayerNorm
+        self.apply(self._init_weights)
+
+    def _init_weights(self, m):
+        if isinstance(m, nn.Linear):
+            # we use xavier_uniform following official JAX ViT:
+            torch.nn.init.xavier_uniform_(m.weight)
+            if isinstance(m, nn.Linear) and m.bias is not None:
+                nn.init.constant_(m.bias, 0)
+        elif isinstance(m, nn.LayerNorm) or isinstance(m, FusedLayerNorm):
+            nn.init.constant_(m.bias, 0)
+            nn.init.constant_(m.weight, 1.0)
+
+    def patchify(self, imgs):
+        """
+        imgs: (N, 3, H, W)
+        x: (N, L, patch_size**2 *3)
+        """
+        p = self.patch_embed.patch_size[0]
+        assert imgs.shape[2] == imgs.shape[3] and imgs.shape[2] % p == 0
+
+        h = w = imgs.shape[2] // p
+        x = imgs.reshape(shape=(imgs.shape[0], 3, h, p, w, p))
+        x = torch.einsum("nchpwq->nhwpqc", x)
+        x = x.reshape(shape=(imgs.shape[0], h * w, p ** 2 * 3))
+        return x
+
+    def unpatchify(self, x):
+        """
+        x: (N, L, patch_size**2 *3)
+        imgs: (N, 3, H, W)
+        """
+        p = self.patch_embed.patch_size[0]
+        h = w = int(x.shape[1] ** 0.5)
+        assert h * w == x.shape[1]
+
+        x = x.reshape(shape=(x.shape[0], h, w, p, p, 3))
+        x = torch.einsum("nhwpqc->nchpwq", x)
+        imgs = x.reshape(shape=(x.shape[0], 3, h * p, h * p))
+        return imgs
+
+    def random_masking(self, x, mask_ratio):
+        """
+        Perform per-sample random masking by per-sample shuffling.
+        Per-sample shuffling is done by argsort random noise.
+        x: [N, L, D], sequence
+        """
+        N, L, D = x.shape  # batch, length, dim
+        len_keep = int(L * (1 - mask_ratio))
+
+        noise = torch.rand(N, L, device=x.device)  # noise in [0, 1]
+
+        # sort noise for each sample
+        ids_shuffle = torch.argsort(
+            noise, dim=1
+        )  # ascend: small is keep, large is remove
+        ids_restore = torch.argsort(ids_shuffle, dim=1)
+
+        # keep the first subset
+        ids_keep = ids_shuffle[:, :len_keep]
+        x_masked = torch.gather(x, dim=1, index=ids_keep.unsqueeze(-1).repeat(1, 1, D))
+
+        # generate the binary mask: 0 is keep, 1 is remove
+        mask = torch.ones([N, L], device=x.device)
+        mask[:, :len_keep] = 0
+        # unshuffle to get the binary mask
+        mask = torch.gather(mask, dim=1, index=ids_restore)
+
+        return x_masked, mask, ids_restore  # x_masked is actually unmasked x
+
+    @classmethod
+    def build_model(cls, cfg: MaeConfig, task=None):
+        """Build a new model instance."""
+
+        return cls(cfg)
+
+    def forward_encoder(self, x, mask_ratio):
+        # embed patches
+        x = self.patch_embed(x)
+
+        # add pos embed w/o cls token
+        # if self.cls_token is not None:
+        #     x = x + self.pos_embed
+        # else:
+        x = x + self.pos_embed[:, 1:, :]
+
+        # masking: length -> length * mask_ratio
+        if mask_ratio > 0:
+            x, mask, ids_restore = self.random_masking(x, mask_ratio)
+        else:
+            mask = ids_restore = None
+
+        # append cls token
+        if self.cls_token is not None:
+            cls_token = self.cls_token + self.pos_embed[:, :1, :]
+            cls_tokens = cls_token.expand(x.shape[0], -1, -1)
+            x = torch.cat((cls_tokens, x), dim=1)
+
+        # apply Transformer blocks
+        for blk in self.blocks:
+            x = blk(x)
+
+        if self.norm is not None:
+            x = self.norm(x)
+
+        return x, mask, ids_restore
+
+    def forward_decoder(self, x, ids_restore):
+        # embed tokens
+        x = self.decoder_embed(x)
+
+        # append mask tokens to sequence
+        mask_tokens = self.mask_token.repeat(
+            x.shape[0], ids_restore.shape[1] + 1 - x.shape[1], 1
+        )
+        if self.cls_token is not None:
+            x_ = torch.cat([x[:, 1:, :], mask_tokens], dim=1)  # no cls token
+        else:
+            x_ = torch.cat([x, mask_tokens], dim=1)  # no cls token
+
+        x_ = torch.gather(
+            x_, dim=1, index=ids_restore.unsqueeze(-1).repeat(1, 1, x.shape[2])
+        )  # unshuffle
+
+        if self.cls_token is not None:
+            x = torch.cat([x[:, :1, :], x_], dim=1)  # append cls token
+
+        # add pos embed
+        x = x + self.decoder_pos_embed
+
+        # apply Transformer blocks
+        for blk in self.decoder_blocks:
+            x = blk(x)
+        x = self.decoder_norm(x)
+
+        # predictor projection
+        x = self.decoder_pred(x)
+
+        if self.cls_token is not None:
+            # remove cls token
+            x = x[:, 1:, :]
+
+        return x
+
+    def forward_loss(self, imgs, pred, mask):
+        """
+        imgs: [N, 3, H, W]
+        pred: [N, L, p*p*3]
+        mask: [N, L], 0 is keep, 1 is remove,
+        """
+        target = self.patchify(imgs)
+        if self.norm_pix_loss:
+            mean = target.mean(dim=-1, keepdim=True)
+            var = target.var(dim=-1, keepdim=True)
+            target = (target - mean) / (var + 1.0e-6) ** 0.5
+
+        loss = (pred - target) ** 2
+        loss = loss.mean(dim=-1)  # [N, L], mean loss per patch
+
+        loss = (loss * mask).sum()
+        return loss, mask.sum()
+
+    def forward(self, imgs, predictions_only=False):
+        latent, mask, ids_restore = self.forward_encoder(
+            imgs, self.mask_ratio if not predictions_only else 0
+        )
+
+        if predictions_only:
+            return latent
+
+        pred = self.forward_decoder(latent, ids_restore)  # [N, L, p*p*3]
+        loss, sample_size = self.forward_loss(imgs, pred, mask)
+
+        result = {
+            "losses": {"regression": loss},
+            "sample_size": sample_size,
+        }
+        return result
+
+    def remove_pretraining_modules(self):
+        self.decoder_embed = None
+        self.decoder_blocks = None
+        self.decoder_norm = None
+        self.decoder_pos_embed = None
+        self.decoder_pred = None
+        self.mask_token = None
+        if self.cfg.layer_norm_first:
+            self.norm = None

fairseq/examples/data2vec/models/mae_image_classification.py

@@ -0,0 +1,386 @@
+# Copyright (c) Facebook, Inc. and its affiliates.
+#
+# This source code is licensed under the MIT license found in the
+# LICENSE file in the root directory of this source tree.
+
+# The code in this file is adapted from the BeiT implementation which can be found here:
+# https://github.com/microsoft/unilm/tree/master/beit
+
+import logging
+
+from dataclasses import dataclass
+from enum import Enum, auto
+from typing import Any, Optional
+
+import numpy as np
+from omegaconf import II, MISSING
+
+import torch
+import torch.nn as nn
+import torch.nn.functional as F
+
+from fairseq import checkpoint_utils, tasks
+from omegaconf import open_dict
+
+from fairseq.dataclass import FairseqDataclass
+from fairseq.models import BaseFairseqModel, register_model
+from .mae import interpolate_pos_embed
+
+
+logger = logging.getLogger(__name__)
+
+
+class PredictionMode(Enum):
+    MEAN_POOLING = auto()
+    CLS_TOKEN = auto()
+    LIN_SOFTMAX = auto()
+
+
+@dataclass
+class MaeImageClassificationConfig(FairseqDataclass):
+    model_path: str = MISSING
+    no_pretrained_weights: bool = False
+    linear_classifier: bool = False
+    num_classes: int = 1000
+    mixup: float = 0.8
+    cutmix: float = 1.0
+    label_smoothing: float = 0.1
+
+    drop_path_rate: float = 0.1
+    layer_decay: float = 0.65
+
+    mixup_prob: float = 1.0
+    mixup_switch_prob: float = 0.5
+    mixup_mode: str = "batch"
+
+    pretrained_model_args: Any = None
+    data: str = II("task.data")
+
+    norm_eps: Optional[float] = None
+
+    remove_alibi: bool = False
+
+    # regularization overwrites
+    encoder_dropout: float = 0
+    post_mlp_drop: float = 0
+    attention_dropout: float = 0
+    activation_dropout: float = 0.0
+    dropout_input: float = 0.0
+    layerdrop: float = 0.0
+
+    prenet_layerdrop: float = 0
+    prenet_dropout: float = 0
+
+    use_fc_norm: bool = True
+    prediction_mode: PredictionMode = PredictionMode.MEAN_POOLING
+
+    no_decay_blocks: bool = True
+
+
+def get_layer_id_for_vit(name, num_layers):
+    """
+    Assign a parameter with its layer id
+    Following BEiT: https://github.com/microsoft/unilm/blob/master/beit/optim_factory.py#L33
+    """
+    if name in ["cls_token", "pos_embed"]:
+        return 0
+    elif name.startswith("patch_embed"):
+        return 0
+    elif name.startswith("rel_pos_bias"):
+        return num_layers - 1
+    elif name.startswith("blocks"):
+        return int(name.split(".")[1]) + 1
+    else:
+        return num_layers
+
+
+@register_model("mae_image_classification", dataclass=MaeImageClassificationConfig)
+class MaeImageClassificationModel(BaseFairseqModel):
+    def __init__(self, cfg: MaeImageClassificationConfig):
+        super().__init__()
+        self.cfg = cfg
+
+        if cfg.pretrained_model_args is None:
+            state = checkpoint_utils.load_checkpoint_to_cpu(cfg.model_path, {})
+            pretrained_args = state.get("cfg", None)
+
+            pretrained_args.criterion = None
+            pretrained_args.lr_scheduler = None
+
+            logger.info(pretrained_args.model)
+
+            with open_dict(pretrained_args.model):
+                pretrained_args.model.drop_path_rate = cfg.drop_path_rate
+                if cfg.norm_eps is not None:
+                    pretrained_args.model.norm_eps = cfg.norm_eps
+
+            cfg.pretrained_model_args = pretrained_args
+
+            logger.info(pretrained_args)
+        else:
+            state = None
+            pretrained_args = cfg.pretrained_model_args
+
+        if "data" in pretrained_args.task:
+            pretrained_args.task.data = cfg.data
+        elif "image" in pretrained_args.task:
+            pretrained_args.task.image.data = cfg.data
+
+        if "modalities" in pretrained_args.model:
+            prenet_blocks = pretrained_args.model["modalities"]["image"]["prenet_depth"]
+            model_blocks = pretrained_args.model["depth"]
+            with open_dict(pretrained_args):
+                dpr = np.linspace(0, cfg.drop_path_rate, model_blocks).tolist()
+                pretrained_args.model["modalities"]["image"][
+                    "start_drop_path_rate"
+                ] = dpr[0]
+                pretrained_args.model["modalities"]["image"][
+                    "end_drop_path_rate"
+                ] = max(0, dpr[prenet_blocks - 1])
+                pretrained_args.model["start_drop_path_rate"] = dpr[prenet_blocks]
+                pretrained_args.model["end_drop_path_rate"] = dpr[-1]
+
+                if "mae_masking" in pretrained_args.model["modalities"]["image"]:
+                    del pretrained_args.model["modalities"]["image"]["mae_masking"]
+
+                if cfg.remove_alibi:
+                    pretrained_args.model["modalities"]["image"][
+                        "use_alibi_encoder"
+                    ] = False
+                    if (
+                        state is not None
+                        and "modality_encoders.IMAGE.alibi_bias" in state["model"]
+                    ):
+                        del state["model"]["modality_encoders.IMAGE.alibi_bias"]
+
+                pretrained_args.model["encoder_dropout"] = cfg.encoder_dropout
+                pretrained_args.model["post_mlp_drop"] = cfg.post_mlp_drop
+                pretrained_args.model["attention_dropout"] = cfg.attention_dropout
+                pretrained_args.model["activation_dropout"] = cfg.activation_dropout
+                pretrained_args.model["dropout_input"] = cfg.dropout_input
+                pretrained_args.model["layerdrop"] = cfg.layerdrop
+
+                pretrained_args.model["modalities"]["image"][
+                    "prenet_layerdrop"
+                ] = cfg.prenet_layerdrop
+                pretrained_args.model["modalities"]["image"][
+                    "prenet_dropout"
+                ] = cfg.prenet_dropout
+        else:
+            # not d2v multi
+            with open_dict(pretrained_args):
+                pretrained_args.model["drop_path_rate"] = cfg.drop_path_rate
+                pretrained_args.model["block_dropout"] = cfg.encoder_dropout
+                pretrained_args.model["attention_dropout"] = cfg.attention_dropout
+                pretrained_args.model["activation_dropout"] = cfg.activation_dropout
+
+        task = tasks.setup_task(pretrained_args.task)
+        model = task.build_model(pretrained_args.model, from_checkpoint=True)
+
+        self.d2v_multi = "data2vec_multi" in pretrained_args.model._name
+        self.linear_classifier = cfg.linear_classifier
+
+        self.model = model
+
+        if state is not None and not cfg.no_pretrained_weights:
+            interpolate_pos_embed(model, state)
+
+            if "modality_encoders.IMAGE.positional_encoder.pos_embed" in state["model"]:
+                state["model"][
+                    "modality_encoders.IMAGE.positional_encoder.positions"
+                ] = state["model"][
+                    "modality_encoders.IMAGE.positional_encoder.pos_embed"
+                ]
+                del state["model"][
+                    "modality_encoders.IMAGE.positional_encoder.pos_embed"
+                ]
+            if "modality_encoders.IMAGE.encoder_mask" in state["model"]:
+                del state["model"]["modality_encoders.IMAGE.encoder_mask"]
+
+            model.load_state_dict(state["model"], strict=True)
+
+        if self.d2v_multi:
+            model.remove_pretraining_modules(modality="image")
+        else:
+            model.remove_pretraining_modules()
+
+        if self.linear_classifier:
+            model.requires_grad_(False)
+
+        self.fc_norm = None
+        if self.cfg.use_fc_norm:
+            self.fc_norm = nn.LayerNorm(pretrained_args.model.embed_dim, eps=1e-6)
+            nn.init.constant_(self.fc_norm.bias, 0)
+            nn.init.constant_(self.fc_norm.weight, 1.0)
+
+        self.head = nn.Linear(pretrained_args.model.embed_dim, cfg.num_classes)
+
+        nn.init.trunc_normal_(self.head.weight, std=0.02)
+        nn.init.constant_(self.head.bias, 0)
+
+        self.mixup_fn = None
+
+        if cfg.mixup > 0 or cfg.cutmix > 0:
+            from timm.data import Mixup
+
+            self.mixup_fn = Mixup(
+                mixup_alpha=cfg.mixup,
+                cutmix_alpha=cfg.cutmix,
+                cutmix_minmax=None,
+                prob=cfg.mixup_prob,
+                switch_prob=cfg.mixup_switch_prob,
+                mode=cfg.mixup_mode,
+                label_smoothing=cfg.label_smoothing,
+                num_classes=cfg.num_classes,
+            )
+
+        if self.model.norm is not None:
+            for pn, p in self.model.norm.named_parameters():
+                if len(p.shape) == 1 or pn.endswith(".bias"):
+                    p.optim_overrides = {"optimizer": {"weight_decay_scale": 0}}
+
+        if self.fc_norm is not None:
+            for pn, p in self.fc_norm.named_parameters():
+                if len(p.shape) == 1 or pn.endswith(".bias"):
+                    p.optim_overrides = {"optimizer": {"weight_decay_scale": 0}}
+
+        for pn, p in self.head.named_parameters():
+            if len(p.shape) == 1 or pn.endswith(".bias"):
+                p.optim_overrides = {"optimizer": {"weight_decay_scale": 0}}
+
+        if self.d2v_multi:
+            mod_encs = list(model.modality_encoders.values())
+            assert len(mod_encs) == 1, len(mod_encs)
+            blocks = list(mod_encs[0].context_encoder.blocks) + list(model.blocks)
+        else:
+            blocks = model.blocks
+
+        num_layers = len(blocks) + 1
+        layer_scales = list(
+            cfg.layer_decay ** (num_layers - i) for i in range(num_layers + 1)
+        )
+
+        if self.d2v_multi:
+            for n, p in self.model.named_parameters():
+                optimizer_override_dict = {}
+
+                if len(p.shape) == 1 or n.endswith(".bias"):
+                    optimizer_override_dict["weight_decay_scale"] = 0
+
+                p.optim_overrides = {"optimizer": optimizer_override_dict}
+
+            if cfg.layer_decay > 0:
+                for i, b in enumerate(blocks):
+                    lid = i + 1
+                    if layer_scales[lid] == 1.0:
+                        continue
+
+                    for n, p in b.named_parameters():
+                        optim_override = getattr(p, "optim_overrides", {})
+                        if "optimizer" not in optim_override:
+                            optim_override["optimizer"] = {}
+
+                        if cfg.no_decay_blocks:
+                            optim_override["optimizer"]["lr_scale"] = layer_scales[lid]
+                            p.optim_overrides = optim_override
+                        else:
+                            optim_override["optimizer"] = {
+                                "lr_scale": layer_scales[lid]
+                            }
+                            p.optim_overrides = optim_override
+
+        else:
+            for n, p in self.model.named_parameters():
+                optimizer_override_dict = {}
+                layer_id = get_layer_id_for_vit(n, num_layers)
+
+                if len(p.shape) == 1 or n.endswith(".bias"):
+                    optimizer_override_dict["weight_decay_scale"] = 0
+
+                if cfg.layer_decay > 0:
+                    optimizer_override_dict["lr_scale"] = layer_scales[layer_id]
+                p.optim_overrides = {"optimizer": optimizer_override_dict}
+
+    @classmethod
+    def build_model(cls, cfg: MaeImageClassificationConfig, task=None):
+        """Build a new model instance."""
+
+        return cls(cfg)
+
+    def forward(
+        self,
+        imgs,
+        labels=None,
+    ):
+        if self.training and self.mixup_fn is not None and labels is not None:
+            imgs, labels = self.mixup_fn(imgs, labels)
+
+        if self.linear_classifier:
+            with torch.no_grad():
+                x = self.model_forward(imgs)
+        else:
+            x = self.model_forward(imgs)
+
+        if self.cfg.prediction_mode == PredictionMode.MEAN_POOLING:
+            x = x.mean(dim=1)
+        elif self.cfg.prediction_mode == PredictionMode.CLS_TOKEN:
+            x = x[:, 0]
+        elif self.cfg.prediction_mode == PredictionMode.LIN_SOFTMAX:
+            dtype = x.dtype
+            x = F.logsigmoid(x.float())
+            x = torch.logsumexp(x + x, dim=1) - torch.logsumexp(x + 1e-6, dim=1)
+            x = x.clamp(max=0)
+            x = x - torch.log(-(torch.expm1(x)))
+            x = torch.nan_to_num(x, nan=0, posinf=0, neginf=0)
+            x = x.to(dtype=dtype)
+        else:
+            raise Exception(f"unknown prediction mode {self.cfg.prediction_mode.name}")
+
+        if self.fc_norm is not None:
+            x = self.fc_norm(x)
+
+        x = self.head(x)
+
+        if labels is None:
+            return x
+
+        if self.training and self.mixup_fn is not None:
+            loss = -labels * F.log_softmax(x.float(), dim=-1)
+        else:
+            loss = F.cross_entropy(
+                x.float(),
+                labels,
+                label_smoothing=self.cfg.label_smoothing if self.training else 0,
+                reduction="none",
+            )
+
+        result = {
+            "losses": {"regression": loss},
+            "sample_size": imgs.size(0),
+        }
+
+        if not self.training:
+            with torch.no_grad():
+                pred = x.argmax(-1)
+                correct = (pred == labels).sum()
+                result["correct"] = correct
+
+        return result
+
+    def model_forward(self, imgs):
+        if self.d2v_multi:
+            x = self.model.extract_features(
+                imgs,
+                mode="IMAGE",
+                mask=False,
+                remove_extra_tokens=(
+                    self.cfg.prediction_mode != PredictionMode.CLS_TOKEN
+                ),
+            )["x"]
+        else:
+            x = self.model(imgs, predictions_only=True)
+            if (
+                "no_cls" not in self.model.cfg or not self.model.cfg.no_cls
+            ) and not self.cfg.prediction_mode == PredictionMode.CLS_TOKEN:
+                x = x[:, 1:]
+        return x

fairseq/examples/data2vec/models/modalities/audio.py

@@ -0,0 +1,192 @@
+# Copyright (c) Facebook, Inc. and its affiliates.
+#
+# This source code is licensed under the MIT license found in the
+# LICENSE file in the root directory of this source tree.
+
+from functools import partial
+import torch
+import torch.nn as nn
+import numpy as np
+from dataclasses import dataclass, field
+from typing import Callable, Dict, Optional
+from fairseq.models.wav2vec import ConvFeatureExtractionModel
+from fairseq.modules import (
+    LayerNorm,
+    SamePad,
+    TransposeLast,
+)
+from fairseq.tasks import FairseqTask
+from .base import D2vModalityConfig, ModalitySpecificEncoder, get_alibi_bias
+from .modules import BlockEncoder, Decoder1d
+from examples.data2vec.data.modality import Modality
+
+
+@dataclass
+class D2vAudioConfig(D2vModalityConfig):
+    type: Modality = Modality.AUDIO
+    extractor_mode: str = "layer_norm"
+    feature_encoder_spec: str = field(
+        default="[(512, 10, 5)] + [(512, 3, 2)] * 4 + [(512,2,2)] + [(512,2,2)]",
+        metadata={
+            "help": "string describing convolutional feature extraction layers in form of a python list that contains "
+            "[(dim, kernel_size, stride), ...]"
+        },
+    )
+    conv_pos_width: int = field(
+        default=95,
+        metadata={"help": "number of filters for convolutional positional embeddings"},
+    )
+    conv_pos_groups: int = field(
+        default=16,
+        metadata={"help": "number of groups for convolutional positional embedding"},
+    )
+    conv_pos_depth: int = field(
+        default=5,
+        metadata={"help": "depth of positional encoder network"},
+    )
+    conv_pos_pre_ln: bool = False
+
+
+class AudioEncoder(ModalitySpecificEncoder):
+
+    modality_cfg: D2vAudioConfig
+
+    def __init__(
+        self,
+        modality_cfg: D2vAudioConfig,
+        embed_dim: int,
+        make_block: Callable[[float], nn.ModuleList],
+        norm_layer: Callable[[int], nn.LayerNorm],
+        layer_norm_first: bool,
+        alibi_biases: Dict,
+        task: Optional[FairseqTask],
+    ):
+
+        self.feature_enc_layers = eval(modality_cfg.feature_encoder_spec)
+        feature_embed_dim = self.feature_enc_layers[-1][0]
+
+        local_encoder = ConvFeatureExtractionModel(
+            conv_layers=self.feature_enc_layers,
+            dropout=0.0,
+            mode=modality_cfg.extractor_mode,
+            conv_bias=False,
+        )
+
+        project_features = nn.Sequential(
+            TransposeLast(),
+            nn.LayerNorm(feature_embed_dim),
+            nn.Linear(feature_embed_dim, embed_dim),
+        )
+
+        num_pos_layers = modality_cfg.conv_pos_depth
+        k = max(3, modality_cfg.conv_pos_width // num_pos_layers)
+
+        positional_encoder = nn.Sequential(
+            TransposeLast(),
+            *[
+                nn.Sequential(
+                    nn.Conv1d(
+                        embed_dim,
+                        embed_dim,
+                        kernel_size=k,
+                        padding=k // 2,
+                        groups=modality_cfg.conv_pos_groups,
+                    ),
+                    SamePad(k),
+                    TransposeLast(),
+                    LayerNorm(embed_dim, elementwise_affine=False),
+                    TransposeLast(),
+                    nn.GELU(),
+                )
+                for _ in range(num_pos_layers)
+            ],
+            TransposeLast(),
+        )
+
+        if modality_cfg.conv_pos_pre_ln:
+            positional_encoder = nn.Sequential(LayerNorm(embed_dim), positional_encoder)
+
+        dpr = np.linspace(
+            modality_cfg.start_drop_path_rate,
+            modality_cfg.end_drop_path_rate,
+            modality_cfg.prenet_depth,
+        )
+        context_encoder = BlockEncoder(
+            nn.ModuleList(make_block(dpr[i]) for i in range(modality_cfg.prenet_depth)),
+            norm_layer(embed_dim) if not layer_norm_first else None,
+            layer_norm_first,
+            modality_cfg.prenet_layerdrop,
+            modality_cfg.prenet_dropout,
+        )
+
+        decoder = (
+            Decoder1d(modality_cfg.decoder, embed_dim)
+            if modality_cfg.decoder is not None
+            else None
+        )
+
+        alibi_bias_fn = partial(get_alibi_bias, alibi_biases=alibi_biases)
+
+        super().__init__(
+            modality_cfg=modality_cfg,
+            embed_dim=embed_dim,
+            local_encoder=local_encoder,
+            project_features=project_features,
+            fixed_positional_encoder=None,
+            relative_positional_encoder=positional_encoder,
+            context_encoder=context_encoder,
+            decoder=decoder,
+            get_alibi_bias=alibi_bias_fn,
+        )
+
+    def convert_padding_mask(self, x, padding_mask):
+        def get_feat_extract_output_lengths(input_lengths: torch.LongTensor):
+            """
+            Computes the output length of the convolutional layers
+            """
+
+            def _conv_out_length(input_length, kernel_size, stride):
+                return torch.floor((input_length - kernel_size) / stride + 1)
+
+            for i in range(len(self.feature_enc_layers)):
+                input_lengths = _conv_out_length(
+                    input_lengths,
+                    self.feature_enc_layers[i][1],
+                    self.feature_enc_layers[i][2],
+                )
+
+            return input_lengths.to(torch.long)
+
+        if padding_mask is not None:
+            input_lengths = (1 - padding_mask.long()).sum(-1)
+            # apply conv formula to get real output_lengths
+            output_lengths = get_feat_extract_output_lengths(input_lengths)
+
+            if padding_mask.any():
+                padding_mask = torch.zeros(x.shape[:2], dtype=x.dtype, device=x.device)
+
+                # these two operations makes sure that all values
+                # before the output lengths indices are attended to
+                padding_mask[
+                    (
+                        torch.arange(padding_mask.shape[0], device=padding_mask.device),
+                        output_lengths - 1,
+                    )
+                ] = 1
+                padding_mask = (
+                    1 - padding_mask.flip([-1]).cumsum(-1).flip([-1])
+                ).bool()
+            else:
+                padding_mask = torch.zeros(
+                    x.shape[:2], dtype=torch.bool, device=x.device
+                )
+
+        return padding_mask
+
+    def reset_parameters(self):
+        super().reset_parameters()
+        for mod in self.project_features.children():
+            if isinstance(mod, nn.Linear):
+                mod.reset_parameters()
+        if self.decoder is not None:
+            self.decoder.reset_parameters()

fairseq/examples/data2vec/models/modalities/base.py

@@ -0,0 +1,684 @@
+# Copyright (c) Facebook, Inc. and its affiliates.
+#
+# This source code is licensed under the MIT license found in the
+# LICENSE file in the root directory of this source tree.
+
+import logging
+import math
+import numpy as np
+import torch
+import torch.nn as nn
+import torch.nn.functional as F
+from collections import namedtuple
+from dataclasses import dataclass
+from functools import partial
+from omegaconf import MISSING, II
+from typing import Optional, Callable
+from fairseq.data.data_utils import compute_mask_indices
+from fairseq.modules import GradMultiply
+from fairseq.utils import index_put
+from examples.data2vec.data.modality import Modality
+from .modules import D2vDecoderConfig
+
+logger = logging.getLogger(__name__)
+
+
+@dataclass
+class D2vModalityConfig:
+    type: Modality = MISSING
+    prenet_depth: int = 4
+    prenet_layerdrop: float = 0
+    prenet_dropout: float = 0
+    start_drop_path_rate: float = 0
+    end_drop_path_rate: float = 0
+
+    num_extra_tokens: int = 0
+    init_extra_token_zero: bool = True
+
+    mask_noise_std: float = 0.01
+    mask_prob_min: Optional[float] = None
+    mask_prob: float = 0.7
+    inverse_mask: bool = False
+    mask_prob_adjust: float = 0
+    keep_masked_pct: float = 0
+
+    mask_length: int = 5
+    add_masks: bool = False
+    remove_masks: bool = False
+    mask_dropout: float = 0.0
+    encoder_zero_mask: bool = True
+
+    mask_channel_prob: float = 0.0
+    mask_channel_length: int = 64
+
+    ema_local_encoder: bool = False  # used in data2vec_multi
+    local_grad_mult: float = 1.0
+
+    use_alibi_encoder: bool = False
+    alibi_scale: float = 1.0
+    learned_alibi: bool = False
+    alibi_max_pos: Optional[int] = None
+    learned_alibi_scale: bool = False
+    learned_alibi_scale_per_head: bool = False
+    learned_alibi_scale_per_layer: bool = False
+
+    num_alibi_heads: int = II("model.num_heads")
+    model_depth: int = II("model.depth")
+
+    decoder: Optional[D2vDecoderConfig] = D2vDecoderConfig()
+
+
+MaskSeed = namedtuple("MaskSeed", ["seed", "update", "ids"])
+MaskInfo = namedtuple("MaskInfo", ["x_unmasked", "mask", "ids_restore", "ids_keep"])
+
+
+class ModalitySpecificEncoder(nn.Module):
+    def __init__(
+        self,
+        modality_cfg: D2vModalityConfig,
+        embed_dim: int,
+        local_encoder: nn.Module,
+        project_features: nn.Module,
+        fixed_positional_encoder: Optional[nn.Module],
+        relative_positional_encoder: Optional[nn.Module],
+        context_encoder: nn.Module,
+        decoder: nn.Module,
+        get_alibi_bias: Optional[Callable[[int, int, str, str], torch.Tensor]],
+    ):
+        super().__init__()
+
+        self.modality_cfg = modality_cfg
+        self.local_encoder = local_encoder
+        self.project_features = project_features
+        self.fixed_positional_encoder = fixed_positional_encoder
+        self.relative_positional_encoder = relative_positional_encoder
+        self.context_encoder = context_encoder
+
+        self.decoder = decoder
+        self.get_alibi_bias = get_alibi_bias if modality_cfg.use_alibi_encoder else None
+
+        self.local_grad_mult = self.modality_cfg.local_grad_mult
+
+        self.extra_tokens = None
+        if modality_cfg.num_extra_tokens > 0:
+            self.extra_tokens = nn.Parameter(
+                torch.zeros(1, modality_cfg.num_extra_tokens, embed_dim)
+            )
+            if not modality_cfg.init_extra_token_zero:
+                nn.init.normal_(self.extra_tokens)
+            elif self.extra_tokens.size(1) > 1:
+                nn.init.normal_(self.extra_tokens[:, 1:])
+
+        self.alibi_scale = None
+        if self.get_alibi_bias is not None:
+            self.alibi_scale = nn.Parameter(
+                torch.full(
+                    (
+                        (modality_cfg.prenet_depth + modality_cfg.model_depth)
+                        if modality_cfg.learned_alibi_scale_per_layer
+                        else 1,
+                        1,
+                        self.modality_cfg.num_alibi_heads
+                        if modality_cfg.learned_alibi_scale_per_head
+                        else 1,
+                        1,
+                        1,
+                    ),
+                    modality_cfg.alibi_scale,
+                    dtype=torch.float,
+                ),
+                requires_grad=modality_cfg.learned_alibi_scale,
+            )
+
+        if modality_cfg.learned_alibi and self.get_alibi_bias is not None:
+            assert modality_cfg.alibi_max_pos is not None
+            alibi_bias = self.get_alibi_bias(
+                batch_size=1,
+                time_steps=modality_cfg.alibi_max_pos,
+                heads=modality_cfg.num_alibi_heads,
+                scale=1.0,
+                dtype=torch.float,
+                device="cpu",
+            )
+            self.alibi_bias = nn.Parameter(alibi_bias)
+            self.get_alibi_bias = partial(
+                _learned_alibi_bias, alibi_bias=self.alibi_bias
+            )
+
+    def upgrade_state_dict_named(self, state_dict, name):
+        k = f"{name}.alibi_scale"
+        if k in state_dict and state_dict[k].dim() == 4:
+            state_dict[k] = state_dict[k].unsqueeze(0)
+
+        return state_dict
+
+    def convert_padding_mask(self, x, padding_mask):
+        return padding_mask
+
+    def decoder_input(self, x, mask_info: MaskInfo):
+        inp_drop = self.modality_cfg.decoder.input_dropout
+        if inp_drop > 0:
+            x = F.dropout(x, inp_drop, training=self.training, inplace=True)
+
+        num_extra = self.modality_cfg.num_extra_tokens
+
+        if mask_info is not None:
+            num_masked = mask_info.ids_restore.shape[1] - x.shape[1] + num_extra
+
+            mask_tokens = x.new_empty(
+                x.size(0),
+                num_masked,
+                x.size(-1),
+            ).normal_(0, self.modality_cfg.mask_noise_std)
+
+            x_ = torch.cat([x[:, num_extra:], mask_tokens], dim=1)
+            x = torch.gather(x_, dim=1, index=mask_info.ids_restore)
+
+            if self.modality_cfg.decoder.add_positions_masked:
+                assert self.fixed_positional_encoder is not None
+                pos = self.fixed_positional_encoder(x, None)
+                x = x + (pos * mask_info.mask.unsqueeze(-1))
+        else:
+            x = x[:, num_extra:]
+
+        if self.modality_cfg.decoder.add_positions_all:
+            assert self.fixed_positional_encoder is not None
+            x = x + self.fixed_positional_encoder(x, None)
+
+        return x, mask_info
+
+    def local_features(self, features):
+        if self.local_grad_mult > 0:
+            if self.local_grad_mult == 1.0:
+                x = self.local_encoder(features)
+            else:
+                x = GradMultiply.apply(
+                    self.local_encoder(features), self.local_grad_mult
+                )
+        else:
+            with torch.no_grad():
+                x = self.local_encoder(features)
+
+        x = self.project_features(x)
+        return x
+
+    def contextualized_features(
+        self,
+        x,
+        padding_mask,
+        mask,
+        remove_masked,
+        clone_batch: int = 1,
+        mask_seeds: Optional[torch.Tensor] = None,
+        precomputed_mask=None,
+    ):
+
+        if padding_mask is not None:
+            padding_mask = self.convert_padding_mask(x, padding_mask)
+
+        local_features = x
+        if mask and clone_batch == 1:
+            local_features = local_features.clone()
+
+        orig_B, orig_T, _ = x.shape
+        pre_mask_B = orig_B
+        mask_info = None
+
+        x_pos = None
+        if self.fixed_positional_encoder is not None:
+            x = x + self.fixed_positional_encoder(x, padding_mask)
+
+        if mask:
+            if clone_batch > 1:
+                x = x.repeat_interleave(clone_batch, 0)
+                if mask_seeds is not None:
+                    clone_hash = [
+                        int(hash((mask_seeds.seed, ind)) % 1e10)
+                        for ind in range(clone_batch - 1)
+                    ]
+                    clone_hash = torch.tensor([0] + clone_hash).long().view(1, -1)
+
+                    id = mask_seeds.ids
+                    id = id.repeat_interleave(clone_batch, 0)
+                    id = id.view(-1, clone_batch) + clone_hash.to(id)
+                    id = id.view(-1)
+                    mask_seeds = MaskSeed(
+                        seed=mask_seeds.seed, update=mask_seeds.update, ids=id
+                    )
+                if padding_mask is not None:
+                    padding_mask = padding_mask.repeat_interleave(clone_batch, 0)
+
+            x, mask_info = self.compute_mask(
+                x,
+                padding_mask,
+                mask_seed=mask_seeds,
+                apply=self.relative_positional_encoder is not None or not remove_masked,
+                precomputed_mask=precomputed_mask,
+            )
+
+        if self.relative_positional_encoder is not None:
+            x_pos = self.relative_positional_encoder(x)
+
+        masked_padding_mask = padding_mask
+        if mask and remove_masked:
+            x = mask_info.x_unmasked
+            if x_pos is not None:
+                x = x + gather_unmasked(x_pos, mask_info)
+
+            if padding_mask is not None and padding_mask.any():
+                masked_padding_mask = gather_unmasked_mask(padding_mask, mask_info)
+                if not masked_padding_mask.any():
+                    masked_padding_mask = None
+            else:
+                masked_padding_mask = None
+
+        elif x_pos is not None:
+            x = x + x_pos
+
+        alibi_bias = None
+        alibi_scale = self.alibi_scale
+
+        if self.get_alibi_bias is not None:
+            alibi_bias = self.get_alibi_bias(
+                batch_size=pre_mask_B,
+                time_steps=orig_T,
+                heads=self.modality_cfg.num_alibi_heads,
+                dtype=torch.float32,
+                device=x.device,
+            )
+
+            if alibi_scale is not None:
+                alibi_scale = alibi_scale.clamp_min(0)
+                if alibi_scale.size(0) == 1:
+                    alibi_bias = alibi_bias * alibi_scale.squeeze(0).type_as(alibi_bias)
+                    alibi_scale = None
+
+            if clone_batch > 1:
+                alibi_bias = alibi_bias.repeat_interleave(clone_batch, 0)
+
+            if mask_info is not None and remove_masked:
+                alibi_bias = masked_alibi(alibi_bias, mask_info)
+
+        if self.extra_tokens is not None:
+            num = self.extra_tokens.size(1)
+            x = torch.cat([self.extra_tokens.expand(x.size(0), -1, -1), x], dim=1)
+            if masked_padding_mask is not None:
+                # B x T
+                masked_padding_mask = F.pad(masked_padding_mask, (num, 0))
+            if alibi_bias is not None:
+                # B x H x T x T
+                alibi_bias = F.pad(alibi_bias, (num, 0, num, 0))
+
+        x = self.context_encoder(
+            x,
+            masked_padding_mask,
+            alibi_bias,
+            alibi_scale[: self.modality_cfg.prenet_depth]
+            if alibi_scale is not None
+            else None,
+        )
+
+        return {
+            "x": x,
+            "local_features": local_features,
+            "padding_mask": masked_padding_mask,
+            "alibi_bias": alibi_bias,
+            "alibi_scale": alibi_scale[self.modality_cfg.prenet_depth :]
+            if alibi_scale is not None and alibi_scale.size(0) > 1
+            else alibi_scale,
+            "encoder_mask": mask_info,
+        }
+
+    def forward(
+        self,
+        features,
+        padding_mask,
+        mask: bool,
+        remove_masked: bool,
+        clone_batch: int = 1,
+        mask_seeds: Optional[torch.Tensor] = None,
+        precomputed_mask=None,
+    ):
+        x = self.local_features(features)
+        return self.contextualized_features(
+            x,
+            padding_mask,
+            mask,
+            remove_masked,
+            clone_batch,
+            mask_seeds,
+            precomputed_mask,
+        )
+
+    def reset_parameters(self):
+        pass
+
+    def compute_mask(
+        self,
+        x,
+        padding_mask,
+        mask_seed: Optional[MaskSeed],
+        apply,
+        precomputed_mask,
+    ):
+        if precomputed_mask is not None:
+            mask = precomputed_mask
+            mask_info = self.make_maskinfo(x, mask)
+        else:
+            B, T, C = x.shape
+            cfg = self.modality_cfg
+
+            mask_prob = cfg.mask_prob
+
+            if (
+                cfg.mask_prob_min is not None
+                and cfg.mask_prob_min >= 0
+                and cfg.mask_prob_min < mask_prob
+            ):
+                mask_prob = np.random.uniform(cfg.mask_prob_min, mask_prob)
+
+            if mask_prob > 0:
+                if cfg.mask_length == 1:
+                    mask_info = random_masking(x, mask_prob, mask_seed)
+                else:
+                    if self.modality_cfg.inverse_mask:
+                        mask_prob = 1 - mask_prob
+
+                    mask = compute_mask_indices(
+                        (B, T),
+                        padding_mask,
+                        mask_prob,
+                        cfg.mask_length,
+                        min_masks=1,
+                        require_same_masks=True,
+                        mask_dropout=cfg.mask_dropout,
+                        add_masks=cfg.add_masks,
+                        seed=mask_seed.seed if mask_seed is not None else None,
+                        epoch=mask_seed.update if mask_seed is not None else None,
+                        indices=mask_seed.ids if mask_seed is not None else None,
+                    )
+
+                    mask = torch.from_numpy(mask).to(device=x.device)
+                    if self.modality_cfg.inverse_mask:
+                        mask = 1 - mask
+                    mask_info = self.make_maskinfo(x, mask)
+            else:
+                mask_info = None
+
+        if apply:
+            x = self.apply_mask(x, mask_info)
+
+        return x, mask_info
+
+    def make_maskinfo(self, x, mask, shape=None):
+        if shape is None:
+            B, T, D = x.shape
+        else:
+            B, T, D = shape
+
+        mask = mask.to(torch.uint8)
+        ids_shuffle = mask.argsort(dim=1)
+        ids_restore = ids_shuffle.argsort(dim=1).unsqueeze(-1).expand(-1, -1, D)
+
+        len_keep = T - mask[0].sum()
+        if self.modality_cfg.keep_masked_pct > 0:
+            len_keep += round((T - int(len_keep)) * self.modality_cfg.keep_masked_pct)
+
+        ids_keep = ids_shuffle[:, :len_keep]
+
+        if shape is not None:
+            x_unmasked = None
+        else:
+            ids_keep = ids_keep.unsqueeze(-1).expand(-1, -1, D)
+            x_unmasked = torch.gather(x, dim=1, index=ids_keep)
+
+        mask_info = MaskInfo(
+            x_unmasked=x_unmasked,
+            mask=mask,
+            ids_restore=ids_restore,
+            ids_keep=ids_keep,
+        )
+        return mask_info
+
+    def apply_mask(self, x, mask_info):
+        cfg = self.modality_cfg
+        B, T, C = x.shape
+
+        if mask_info is not None:
+            mask = mask_info.mask
+            if cfg.encoder_zero_mask:
+                x = x * (1 - mask.type_as(x).unsqueeze(-1))
+            else:
+                num_masks = mask.sum().item()
+                masks = x.new_empty(num_masks, x.size(-1)).normal_(
+                    0, cfg.mask_noise_std
+                )
+                x = index_put(x, mask, masks)
+        if cfg.mask_channel_prob > 0:
+            mask_channel = compute_mask_indices(
+                (B, C),
+                None,
+                cfg.mask_channel_prob,
+                cfg.mask_channel_length,
+            )
+            mask_channel = (
+                torch.from_numpy(mask_channel)
+                .to(x.device)
+                .unsqueeze(1)
+                .expand(-1, T, -1)
+            )
+            x = index_put(x, mask_channel, 0)
+        return x
+
+    def remove_pretraining_modules(self, keep_decoder=False):
+        if not keep_decoder:
+            self.decoder = None
+
+
+def get_annealed_rate(start, end, curr_step, total_steps):
+    if curr_step >= total_steps:
+        return end
+    r = end - start
+    pct_remaining = 1 - curr_step / total_steps
+    return end - r * pct_remaining
+
+
+# adapted from MAE
+def random_masking(x, mask_ratio, mask_seed: Optional[MaskSeed]):
+    N, L, D = x.shape  # batch, length, dim
+    len_keep = int(L * (1 - mask_ratio))
+
+    generator = None
+    if mask_seed is not None:
+        seed = int(
+            hash((mask_seed.seed, mask_seed.update, mask_seed.ids.sum().item())) % 1e6
+        )
+        generator = torch.Generator(device=x.device)
+        generator.manual_seed(seed)
+
+    noise = torch.rand(N, L, generator=generator, device=x.device)  # noise in [0, 1]
+
+    # sort noise for each sample
+    ids_shuffle = noise.argsort(dim=1)  # ascend: small is keep, large is remove
+    ids_restore = ids_shuffle.argsort(dim=1)
+
+    # keep the first subset
+    ids_keep = ids_shuffle[:, :len_keep]
+    ids_keep = ids_keep.unsqueeze(-1).expand(-1, -1, D)
+    x_unmasked = torch.gather(x, dim=1, index=ids_keep)
+
+    # generate the binary mask: 0 is keep, 1 is remove
+    mask = torch.ones([N, L], dtype=x.dtype, device=x.device)
+    mask[:, :len_keep] = 0
+    # unshuffle to get the binary mask
+    mask = torch.gather(mask, dim=1, index=ids_restore)
+
+    ids_restore = ids_restore.unsqueeze(-1).expand(-1, -1, D)
+
+    return MaskInfo(
+        x_unmasked=x_unmasked, mask=mask, ids_restore=ids_restore, ids_keep=ids_keep
+    )
+
+
+def gather_unmasked(x: torch.Tensor, mask_info: MaskInfo) -> torch.Tensor:
+    return torch.gather(
+        x,
+        dim=1,
+        index=mask_info.ids_keep,
+    )
+
+
+def gather_unmasked_mask(x: torch.Tensor, mask_info: MaskInfo) -> torch.Tensor:
+    return torch.gather(
+        x,
+        dim=1,
+        index=mask_info.ids_keep[..., 0],  # ignore the feature dimension
+    )
+
+
+def get_alibi(
+    max_positions: int,
+    attention_heads: int,
+    dims: int = 1,
+    distance: str = "manhattan",
+):
+    def get_slopes(n):
+        def get_slopes_power_of_2(n):
+            start = 2 ** (-(2 ** -(math.log2(n) - 3)))
+            ratio = start
+            return [start * ratio**i for i in range(n)]
+
+        # In the paper, we only train models that have 2^a heads for some
+        # a. This function has some good properties that only occur when
+        # the input is a power of 2. To maintain that even when the number
+        # of heads is not a power of 2, we use this workaround.
+        if math.log2(n).is_integer():
+            return get_slopes_power_of_2(n)
+        else:
+            closest_power_of_2 = 2 ** math.floor(math.log2(n))
+            return (
+                get_slopes_power_of_2(closest_power_of_2)
+                + get_slopes(2 * closest_power_of_2)[0::2][: n - closest_power_of_2]
+            )
+
+    maxpos = max_positions
+    attn_heads = attention_heads
+    slopes = torch.Tensor(get_slopes(attn_heads))
+
+    if dims == 1:
+        # prepare alibi position linear bias. Note that wav2vec2 is non
+        # autoregressive model so we want a symmetric mask with 0 on the
+        # diagonal and other wise linear decreasing valuees
+        pos_bias = (
+            torch.abs(
+                torch.arange(maxpos).unsqueeze(0) - torch.arange(maxpos).unsqueeze(1)
+            )
+            * -1
+        )
+    elif dims == 2:
+        if distance == "manhattan":
+            df = lambda x1, y1, x2, y2: abs(x1 - x2) + abs(y1 - y2)
+        elif distance == "euclidean":
+            df = lambda x1, y1, x2, y2: math.sqrt((x1 - x2) ** 2 + (y1 - y2) ** 2)
+
+        n = math.sqrt(max_positions)
+        assert n.is_integer(), n
+        n = int(n)
+
+        pos_bias = torch.zeros((max_positions, max_positions))
+
+        for i in range(n):
+            for j in range(n):
+                for k in range(n):
+                    for l in range(n):
+                        new_x = i * n + j
+                        new_y = k * n + l
+                        pos_bias[new_x, new_y] = -df(i, j, k, l)
+
+    else:
+        raise Exception(f"unsupported number of alibi dims: {dims}")
+
+    alibi_bias = slopes.unsqueeze(1).unsqueeze(1) * pos_bias.unsqueeze(0).expand(
+        attn_heads, -1, -1
+    )
+
+    return alibi_bias
+
+
+def get_alibi_bias(
+    alibi_biases,
+    batch_size,
+    time_steps,
+    heads,
+    dtype,
+    device,
+    dims=1,
+    distance="manhattan",
+):
+    cache_key = f"{dims}_{heads}_{distance}"
+
+    buffered = alibi_biases.get(cache_key, None)
+
+    target_size = heads * batch_size
+    if (
+        buffered is None
+        or buffered.size(0) < target_size
+        or buffered.size(1) < time_steps
+        or buffered.dtype != dtype
+        or buffered.device != device
+    ):
+        bt = max(time_steps, buffered.size(1) if buffered is not None else 0)
+        bn = max(target_size, buffered.size(0) if buffered is not None else 0) // heads
+
+        buffered = (
+            get_alibi(bt, heads, dims=dims, distance=distance)
+            .to(dtype=dtype, device=device)
+            .repeat(bn, 1, 1)
+        )
+
+        alibi_biases[cache_key] = buffered
+
+    b = buffered[:target_size, :time_steps, :time_steps]
+    b = b.view(batch_size, heads, time_steps, time_steps)
+    return b
+
+
+def _learned_alibi_bias(
+    alibi_bias,
+    batch_size,
+    time_steps,
+    heads,
+    scale,
+    dtype,
+    device,
+):
+    assert alibi_bias.size(1) == heads, alibi_bias.shape
+    assert alibi_bias.dtype == dtype, alibi_bias.dtype
+    assert alibi_bias.device == device, alibi_bias.device
+
+    if alibi_bias.size(-1) < time_steps:
+        psz = math.ceil((time_steps - alibi_bias.size(-1)) / 2)
+        alibi_bias = F.pad(alibi_bias, (psz, psz, psz, psz), mode="replicate")
+
+    alibi_bias = alibi_bias.expand(batch_size, -1, -1, -1) * scale
+    return alibi_bias[..., :time_steps, :time_steps]
+
+
+def masked_alibi(alibi_bias, mask_info):
+    H = alibi_bias.size(1)
+
+    orig_bias = alibi_bias
+
+    index = mask_info.ids_keep.unsqueeze(1)[..., 0].unsqueeze(-1)
+    alibi_bias = torch.gather(
+        orig_bias,
+        dim=-2,
+        index=index.expand(-1, H, -1, mask_info.ids_restore.size(1)),
+    )
+    alibi_bias = torch.gather(
+        alibi_bias,
+        dim=-1,
+        index=index.transpose(-1, -2).expand(-1, H, alibi_bias.size(-2), -1),
+    )
+
+    return alibi_bias

fairseq/examples/data2vec/models/modalities/images.py

@@ -0,0 +1,256 @@
+# Copyright (c) Facebook, Inc. and its affiliates.
+#
+# This source code is licensed under the MIT license found in the
+# LICENSE file in the root directory of this source tree.
+
+import torch
+import torch.nn as nn
+import torch.nn.functional as F
+import numpy as np
+from functools import partial
+from dataclasses import dataclass
+from typing import Callable, Dict, Optional
+from timm.models.layers import to_2tuple
+from fairseq.tasks import FairseqTask
+from examples.data2vec.models.mae import get_2d_sincos_pos_embed, PatchEmbed
+from .base import (
+    D2vModalityConfig,
+    ModalitySpecificEncoder,
+    get_alibi_bias,
+    MaskSeed,
+)
+from .modules import (
+    BlockEncoder,
+    Decoder2d,
+    FixedPositionalEncoder,
+    TransformerDecoder,
+    EncDecTransformerDecoder,
+)
+from examples.data2vec.data.modality import Modality
+
+
+@dataclass
+class D2vImageConfig(D2vModalityConfig):
+    type: Modality = Modality.IMAGE
+
+    input_size: int = 224
+    in_chans: int = 3
+    patch_size: int = 16
+    embed_dim: int = 768
+
+    alibi_dims: int = 2
+    alibi_distance: str = "manhattan"
+
+    fixed_positions: bool = True
+
+    transformer_decoder: bool = False
+    enc_dec_transformer: bool = False
+
+
+class ImageEncoder(ModalitySpecificEncoder):
+
+    modality_cfg: D2vImageConfig
+
+    def __init__(
+        self,
+        modality_cfg: D2vImageConfig,
+        embed_dim: int,
+        make_block: Callable[[float, Optional[int], Optional[int]], nn.ModuleList],
+        norm_layer: Callable[[int], nn.LayerNorm],
+        layer_norm_first: bool,
+        alibi_biases: Dict,
+        task: Optional[FairseqTask],
+    ):
+
+        img_size = to_2tuple(modality_cfg.input_size)
+        patch_size = to_2tuple(modality_cfg.patch_size)
+        num_patches = (img_size[1] // patch_size[1]) * (img_size[0] // patch_size[0])
+
+        local_encoder = PatchEmbed(
+            modality_cfg.input_size,
+            modality_cfg.patch_size,
+            modality_cfg.in_chans,
+            modality_cfg.embed_dim,
+        )
+
+        w = local_encoder.proj.weight.data
+        torch.nn.init.xavier_uniform_(w.view([w.shape[0], -1]))
+
+        if modality_cfg.embed_dim != embed_dim:
+            local_encoder = nn.Sequential(
+                local_encoder,
+                nn.Linear(modality_cfg.embed_dim, embed_dim),
+            )
+
+        project_features = nn.Identity()
+
+        pos_embed = nn.Parameter(
+            torch.zeros(1, num_patches, embed_dim), requires_grad=False
+        )
+
+        side_n = int(num_patches ** 0.5)
+
+        emb = get_2d_sincos_pos_embed(
+            pos_embed.shape[-1],
+            side_n,
+            cls_token=False,
+        )
+        pos_embed.data.copy_(torch.from_numpy(emb).float().unsqueeze(0))
+        fixed_positional_encoder = (
+            FixedPositionalEncoder(pos_embed) if modality_cfg.fixed_positions else None
+        )
+
+        dpr = np.linspace(
+            modality_cfg.start_drop_path_rate,
+            modality_cfg.end_drop_path_rate,
+            modality_cfg.prenet_depth,
+        )
+
+        context_encoder = BlockEncoder(
+            nn.ModuleList(make_block(dpr[i]) for i in range(modality_cfg.prenet_depth)),
+            norm_layer(embed_dim) if not layer_norm_first else None,
+            layer_norm_first,
+            modality_cfg.prenet_layerdrop,
+            modality_cfg.prenet_dropout,
+        )
+
+        if modality_cfg.transformer_decoder:
+            if modality_cfg.enc_dec_transformer:
+                decoder = EncDecTransformerDecoder(modality_cfg.decoder, embed_dim)
+            else:
+                dec_enc = BlockEncoder(
+                    nn.ModuleList(
+                        make_block(0, modality_cfg.decoder.decoder_dim, 8)
+                        for _ in range(modality_cfg.decoder.decoder_layers)
+                    ),
+                    None,
+                    layer_norm_first,
+                    0,
+                    0,
+                )
+                decoder = TransformerDecoder(modality_cfg.decoder, embed_dim, dec_enc)
+        else:
+            decoder = (
+                Decoder2d(modality_cfg.decoder, embed_dim, side_n, side_n)
+                if modality_cfg.decoder is not None
+                else None
+            )
+
+        alibi_bias_fn = partial(
+            get_alibi_bias,
+            alibi_biases=alibi_biases,
+            heads=modality_cfg.num_alibi_heads,
+            dims=modality_cfg.alibi_dims,
+            distance=modality_cfg.alibi_distance,
+        )
+
+        super().__init__(
+            modality_cfg=modality_cfg,
+            embed_dim=embed_dim,
+            local_encoder=local_encoder,
+            project_features=project_features,
+            fixed_positional_encoder=fixed_positional_encoder,
+            relative_positional_encoder=None,
+            context_encoder=context_encoder,
+            decoder=decoder,
+            get_alibi_bias=alibi_bias_fn,
+        )
+
+    def reset_parameters(self):
+        super().reset_parameters()
+        if self.decoder is not None:
+            self.decoder.reset_parameters()
+
+    @torch.no_grad()
+    def patchify(self, imgs):
+        """
+        imgs: (N, 3, H, W)
+        x: (N, L, patch_size**2 *3)
+        """
+        p = self.modality_cfg.patch_size
+        h = w = imgs.shape[2] // p
+        x = imgs.reshape(shape=(imgs.shape[0], 3, h, p, w, p))
+        x = torch.einsum("nchpwq->nhwpqc", x)
+        x = x.reshape(shape=(imgs.shape[0], h * w, p ** 2 * 3))
+
+        return x
+
+    @torch.no_grad()
+    def unpatchify(self, x):
+        """
+        x: (N, L, patch_size**2 *3)
+        imgs: (N, 3, H, W)
+        """
+        p = self.modality_cfg.patch_size
+        h = w = int(x.shape[1] ** 0.5)
+        assert h * w == x.shape[1]
+
+        x = x.reshape(shape=(x.shape[0], h, w, p, p, 3))
+        x = torch.einsum("nhwpqc->nchpwq", x)
+        imgs = x.reshape(shape=(x.shape[0], 3, h * p, h * p))
+        return imgs
+
+    def compute_mask(
+        self,
+        x,
+        padding_mask,
+        mask_seed: Optional[MaskSeed],
+        apply,
+        shape=None,
+        precomputed_mask=None,
+    ):
+        mlen = self.modality_cfg.mask_length
+        if mlen <= 1:
+            return super().compute_mask(
+                x, padding_mask, mask_seed, apply, precomputed_mask
+            )
+
+        if precomputed_mask is not None:
+            mask = precomputed_mask
+        else:
+            from fairseq.data.data_utils import compute_block_mask_2d
+
+            if shape is not None:
+                B, L, D = shape
+            else:
+                B, L, D = x.shape
+
+            mask = compute_block_mask_2d(
+                shape=(B, L),
+                mask_prob=self.modality_cfg.mask_prob,
+                mask_length=self.modality_cfg.mask_length,
+                mask_prob_adjust=self.modality_cfg.mask_prob_adjust,
+                inverse_mask=self.modality_cfg.inverse_mask,
+                require_same_masks=True,
+                mask_dropout=self.modality_cfg.mask_dropout,
+            )
+
+        mask_info = self.make_maskinfo(x, mask, shape)
+        if apply:
+            x = self.apply_mask(x, mask_info)
+
+        return x, mask_info
+
+    def decoder_input(self, x, mask_info):
+        if (
+            not self.modality_cfg.transformer_decoder
+            or not self.modality_cfg.enc_dec_transformer
+        ):
+            return super().decoder_input(x, mask_info)
+
+        inp_drop = self.modality_cfg.decoder.input_dropout
+        if inp_drop > 0:
+            x = F.dropout(x, inp_drop, training=self.training, inplace=True)
+
+        kv = x[:, self.modality_cfg.num_extra_tokens :]
+
+        assert self.fixed_positional_encoder is not None
+        pos = self.fixed_positional_encoder(x, None).expand(x.size(0), -1, -1)
+
+        mask = mask_info.mask.bool()
+        if self.modality_cfg.decoder.add_positions_all:
+            kv = kv + pos[~mask].view(kv.shape)
+
+        q = pos[mask].view(x.size(0), -1, x.size(-1))
+
+        return q, kv

fairseq/examples/data2vec/models/modalities/modules.py

@@ -0,0 +1,589 @@
+# Copyright (c) Facebook, Inc. and its affiliates.
+#
+# This source code is licensed under the MIT license found in the
+# LICENSE file in the root directory of this source tree.
+
+import torch
+import torch.nn as nn
+import torch.nn.functional as F
+import numpy as np
+from dataclasses import dataclass
+from fairseq.modules import (
+    LayerNorm,
+    SamePad,
+    SamePad2d,
+    TransposeLast,
+)
+
+
+@dataclass
+class D2vDecoderConfig:
+    decoder_dim: int = 384
+    decoder_groups: int = 16
+    decoder_kernel: int = 5
+    decoder_layers: int = 5
+    input_dropout: float = 0.1
+
+    add_positions_masked: bool = False
+    add_positions_all: bool = False
+
+    decoder_residual: bool = True
+    projection_layers: int = 1
+    projection_ratio: float = 2.0
+
+
+class FixedPositionalEncoder(nn.Module):
+    def __init__(self, pos_embed):
+        super().__init__()
+        self.positions = pos_embed
+
+    def forward(self, x, padding_mask):
+        return self.positions
+
+
+class TextFeatPositionalEncoder(nn.Module):
+    """
+    Original encoder expects (B, T) long input. This module wraps it to take
+    local_encoder output which are (B, T, D) float tensors
+    """
+
+    def __init__(self, pos_encoder):
+        super().__init__()
+        self.pos_encoder = pos_encoder
+
+    def forward(self, x, padding_mask):
+        # assume padded token embeddings are 0s
+        # TODO: consider using padding_mask as input
+        return self.pos_encoder(x[..., 0])
+
+
+class BlockEncoder(nn.Module):
+    def __init__(self, blocks, norm_layer, layer_norm_first, layerdrop, dropout):
+        super().__init__()
+        self.blocks = blocks
+        self.norm = norm_layer
+        self.layer_norm_first = layer_norm_first
+        self.layerdrop = layerdrop
+        self.dropout = nn.Dropout(dropout, inplace=True)
+
+    def forward(self, x, padding_mask, alibi_bias, alibi_scale):
+        if self.norm is not None and not self.layer_norm_first:
+            x = self.norm(x)
+
+        x = self.dropout(x)
+
+        for i, blk in enumerate(self.blocks):
+            if (
+                not self.training
+                or self.layerdrop == 0
+                or (np.random.random() > self.layerdrop)
+            ):
+                ab = alibi_bias
+                if ab is not None and alibi_scale is not None:
+                    scale = (
+                        alibi_scale[i]
+                        if alibi_scale.size(0) > 1
+                        else alibi_scale.squeeze(0)
+                    )
+                    ab = ab * scale.type_as(ab)
+                x, _ = blk(x, padding_mask, ab)
+
+        if self.norm is not None and self.layer_norm_first:
+            x = self.norm(x)
+
+        return x
+
+
+class DecoderBase(nn.Module):
+    decoder_cfg: D2vDecoderConfig
+
+    def __init__(self, cfg: D2vDecoderConfig):
+        super().__init__()
+
+        self.decoder_cfg = cfg
+
+    def reset_parameters(self):
+        for mod in self.proj.modules():
+            if isinstance(mod, nn.Linear):
+                mod.reset_parameters()
+
+    def add_residual(self, x, residual, i, mask_info):
+        if (
+            residual is None
+            or not self.decoder_cfg.decoder_residual
+            or residual.size(1) != x.size(1)
+        ):
+            return x
+
+        ret = x + residual
+
+        return ret
+
+
+class Decoder1d(DecoderBase):
+    def __init__(self, cfg: D2vDecoderConfig, input_dim):
+        super().__init__(cfg)
+
+        def make_block(in_dim):
+            block = [
+                nn.Conv1d(
+                    in_dim,
+                    cfg.decoder_dim,
+                    kernel_size=cfg.decoder_kernel,
+                    padding=cfg.decoder_kernel // 2,
+                    groups=cfg.decoder_groups,
+                ),
+                SamePad(cfg.decoder_kernel),
+                TransposeLast(),
+                LayerNorm(cfg.decoder_dim, elementwise_affine=False),
+                TransposeLast(),
+                nn.GELU(),
+            ]
+
+            return nn.Sequential(*block)
+
+        self.blocks = nn.Sequential(
+            *[
+                make_block(input_dim if i == 0 else cfg.decoder_dim)
+                for i in range(cfg.decoder_layers)
+            ]
+        )
+
+        projs = []
+        curr_dim = cfg.decoder_dim
+        for i in range(cfg.projection_layers - 1):
+            next_dim = int(curr_dim * cfg.projection_ratio) if i == 0 else curr_dim
+            projs.append(nn.Linear(curr_dim, next_dim))
+            projs.append(nn.GELU())
+            curr_dim = next_dim
+        projs.append(nn.Linear(curr_dim, input_dim))
+        if len(projs) == 1:
+            self.proj = projs[0]
+        else:
+            self.proj = nn.Sequential(*projs)
+
+    def forward(self, x, mask_info):
+
+        x = x.transpose(1, 2)
+
+        residual = x
+
+        for i, layer in enumerate(self.blocks):
+            x = layer(x)
+            x = self.add_residual(x, residual, i, mask_info)
+            residual = x
+
+        x = x.transpose(1, 2)
+        x = self.proj(x)
+        return x
+
+
+class Decoder2d(DecoderBase):
+    def __init__(self, cfg: D2vDecoderConfig, input_dim, h_size, w_size):
+        super().__init__(cfg)
+
+        self.h_size = h_size
+        self.w_size = w_size
+
+        def make_block(in_dim):
+            block = [
+                nn.Conv2d(
+                    in_dim,
+                    cfg.decoder_dim,
+                    kernel_size=cfg.decoder_kernel,
+                    padding=cfg.decoder_kernel // 2,
+                    groups=cfg.decoder_groups,
+                ),
+                SamePad2d(cfg.decoder_kernel),
+                TransposeLast(tranpose_dim=-3),
+                LayerNorm(cfg.decoder_dim, elementwise_affine=False),
+                TransposeLast(tranpose_dim=-3),
+                nn.GELU(),
+            ]
+
+            return nn.Sequential(*block)
+
+        self.blocks = nn.Sequential(
+            *[
+                make_block(input_dim if i == 0 else cfg.decoder_dim)
+                for i in range(cfg.decoder_layers)
+            ]
+        )
+
+        self.proj = nn.Linear(cfg.decoder_dim, input_dim)
+
+    def forward(self, x, mask_info):
+        B, T, C = x.shape
+
+        x = x.transpose(1, 2).reshape(B, C, self.h_size, self.w_size)
+
+        residual = x
+
+        for i, layer in enumerate(self.blocks):
+            x = layer(x)
+            x = self.add_residual(x, residual, i, mask_info)
+            residual = x
+
+        x = x.reshape(B, -1, T).transpose(1, 2)
+        x = self.proj(x)
+        return x
+
+
+class TransformerDecoder(nn.Module):
+    decoder_cfg: D2vDecoderConfig
+
+    def __init__(self, cfg: D2vDecoderConfig, input_dim, encoder):
+        super().__init__()
+
+        self.decoder_cfg = cfg
+
+        self.input_proj = nn.Linear(input_dim, cfg.decoder_dim)
+
+        self.encoder = encoder
+
+        self.proj = nn.Linear(cfg.decoder_dim, input_dim)
+
+    def reset_parameters(self):
+        from fairseq.modules.transformer_sentence_encoder import init_bert_params
+
+        self.apply(init_bert_params)
+
+    def forward(self, x, mask_info):
+        x = self.input_proj(x)
+        x = self.encoder(x, None, None, 1)
+        x = self.proj(x)
+        return x
+
+
+class AltBlock(nn.Module):
+    def __init__(
+        self,
+        dim,
+        num_heads,
+        mlp_ratio=4.0,
+        qkv_bias=False,
+        qk_scale=None,
+        drop=0.0,
+        attn_drop=0.0,
+        mlp_drop=0.0,
+        post_mlp_drop=0.0,
+        drop_path=0.0,
+        act_layer=nn.GELU,
+        norm_layer=nn.LayerNorm,
+        layer_norm_first=True,
+        ffn_targets=False,
+        cosine_attention=False,
+    ):
+        super().__init__()
+
+        self.layer_norm_first = layer_norm_first
+        self.ffn_targets = ffn_targets
+
+        from timm.models.vision_transformer import DropPath, Mlp
+
+        self.norm1 = norm_layer(dim)
+        self.attn = AltAttention(
+            dim,
+            num_heads=num_heads,
+            qkv_bias=qkv_bias,
+            qk_scale=qk_scale,
+            attn_drop=attn_drop,
+            proj_drop=drop,
+            cosine_attention=cosine_attention,
+        )
+
+        self.drop_path = DropPath(drop_path) if drop_path > 0.0 else nn.Identity()
+        self.norm2 = norm_layer(dim)
+        mlp_hidden_dim = int(dim * mlp_ratio)
+        self.mlp = Mlp(
+            in_features=dim,
+            hidden_features=mlp_hidden_dim,
+            act_layer=act_layer,
+            drop=mlp_drop,
+        )
+        self.post_mlp_dropout = nn.Dropout(post_mlp_drop, inplace=False)
+
+    def forward(self, x, padding_mask=None, alibi_bias=None):
+        if self.layer_norm_first:
+            x = x + self.drop_path(self.attn(self.norm1(x), padding_mask, alibi_bias))
+            r = x = self.mlp(self.norm2(x))
+            t = x
+            x = r + self.drop_path(self.post_mlp_dropout(x))
+            if not self.ffn_targets:
+                t = x
+        else:
+            x = x + self.drop_path(self.attn(x, padding_mask, alibi_bias))
+            r = x = self.norm1(x)
+            x = self.mlp(x)
+            t = x
+            x = self.norm2(r + self.drop_path(self.post_mlp_dropout(x)))
+            if not self.ffn_targets:
+                t = x
+
+        return x, t
+
+
+class AltAttention(nn.Module):
+    def __init__(
+        self,
+        dim,
+        num_heads=8,
+        qkv_bias=False,
+        qk_scale=None,
+        attn_drop=0.0,
+        proj_drop=0.0,
+        cosine_attention=False,
+    ):
+        super().__init__()
+        self.num_heads = num_heads
+        head_dim = dim // num_heads
+        self.scale = qk_scale or head_dim ** -0.5
+
+        self.qkv = nn.Linear(dim, dim * 3, bias=qkv_bias)
+        self.attn_drop = nn.Dropout(attn_drop)
+        self.proj = nn.Linear(dim, dim)
+        self.proj_drop = nn.Dropout(proj_drop)
+
+        self.cosine_attention = cosine_attention
+
+        if cosine_attention:
+            self.logit_scale = nn.Parameter(
+                torch.log(10 * torch.ones((num_heads, 1, 1))), requires_grad=True
+            )
+
+    def forward(self, x, padding_mask=None, alibi_bias=None):
+        B, N, C = x.shape
+        qkv = (
+            self.qkv(x)
+            .reshape(B, N, 3, self.num_heads, C // self.num_heads)
+            .permute(2, 0, 3, 1, 4)  # qkv x B x H x L x D
+        )
+        q, k, v = (
+            qkv[0],
+            qkv[1],
+            qkv[2],
+        )  # make torchscript happy (cannot use tensor as tuple)
+
+        dtype = q.dtype
+
+        if self.cosine_attention:
+            # cosine attention
+            attn = F.normalize(q, dim=-1) @ F.normalize(k, dim=-1).transpose(-2, -1)
+            logit_scale = torch.clamp(
+                self.logit_scale, max=torch.log(torch.tensor(1.0 / 0.01))
+            ).exp()
+            attn = attn * logit_scale
+        else:
+            q = q * self.scale
+            attn = q @ k.transpose(-2, -1)
+
+        if alibi_bias is not None:
+            attn = attn.type_as(alibi_bias)
+            attn[:, : alibi_bias.size(1)] += alibi_bias
+
+        if padding_mask is not None and padding_mask.any():
+            attn = attn.masked_fill(
+                padding_mask.unsqueeze(1).unsqueeze(2).to(torch.bool),
+                float("-inf"),
+            )
+
+        attn = attn.softmax(dim=-1, dtype=torch.float32).to(dtype=dtype)
+        attn = self.attn_drop(attn)
+        x = (attn @ v).transpose(1, 2)  #
+        x = x.reshape(B, N, C)
+        x = self.proj(x)
+        x = self.proj_drop(x)
+        return x
+
+
+class EncDecAttention(nn.Module):
+    def __init__(
+        self,
+        q_dim,
+        kv_dim,
+        num_heads=8,
+        qkv_bias=False,
+        qk_scale=None,
+        attn_drop=0.0,
+        proj_drop=0.0,
+        cosine_attention=False,
+    ):
+        super().__init__()
+        self.num_heads = num_heads
+        head_dim = q_dim // num_heads
+        self.scale = qk_scale or head_dim ** -0.5
+
+        self.q_proj = nn.Linear(q_dim, q_dim, bias=qkv_bias)
+        self.kv_proj = nn.Linear(kv_dim, 2 * q_dim, bias=qkv_bias)
+        self.attn_drop = nn.Dropout(attn_drop)
+        self.proj = nn.Linear(q_dim, q_dim)
+        self.proj_drop = nn.Dropout(proj_drop)
+
+        self.cosine_attention = cosine_attention
+
+        if cosine_attention:
+            self.logit_scale = nn.Parameter(
+                torch.log(10 * torch.ones((num_heads, 1, 1))), requires_grad=True
+            )
+
+    def forward(self, q, kv, padding_mask=None, alibi_bias=None):
+        B, N, C = q.shape
+
+        q = (
+            self.q_proj(q)
+            .reshape(B, N, self.num_heads, C // self.num_heads)
+            .permute(0, 2, 1, 3)
+        )  # B x H x L x D
+        kv = (
+            self.kv_proj(kv)
+            .reshape(B, -1, 2, self.num_heads, C // self.num_heads)
+            .permute(2, 0, 3, 1, 4)
+        )  # kv x B x H x L x D
+        k, v = (
+            kv[0],
+            kv[1],
+        )  # make torchscript happy (cannot use tensor as tuple)
+
+        dtype = q.dtype
+
+        if self.cosine_attention:
+            # cosine attention
+            attn = F.normalize(q, dim=-1) @ F.normalize(k, dim=-1).transpose(-2, -1)
+            logit_scale = torch.clamp(
+                self.logit_scale, max=torch.log(torch.tensor(1.0 / 0.01))
+            ).exp()
+            attn = attn * logit_scale
+        else:
+            q = q * self.scale
+            attn = q @ k.transpose(-2, -1)
+
+        if alibi_bias is not None:
+            attn = attn.type_as(alibi_bias)
+            attn[:, : alibi_bias.size(1)] += alibi_bias
+
+        if padding_mask is not None and padding_mask.any():
+            attn = attn.masked_fill(
+                padding_mask.unsqueeze(1).unsqueeze(2).to(torch.bool),
+                float("-inf"),
+            )
+
+        attn = attn.softmax(dim=-1, dtype=torch.float32).to(dtype=dtype)
+        attn = self.attn_drop(attn)
+        x = (attn @ v).transpose(1, 2)  #
+        x = x.reshape(B, N, C)
+        x = self.proj(x)
+        x = self.proj_drop(x)
+        return x
+
+
+class EncDecBlock(nn.Module):
+    def __init__(
+        self,
+        q_dim,
+        kv_dim,
+        num_heads,
+        mlp_ratio=4.0,
+        qkv_bias=False,
+        qk_scale=None,
+        drop=0.0,
+        attn_drop=0.0,
+        mlp_drop=0.0,
+        post_mlp_drop=0.0,
+        drop_path=0.0,
+        act_layer=nn.GELU,
+        norm_layer=nn.LayerNorm,
+        layer_norm_first=True,
+        cosine_attention=False,
+        first_residual=True,
+    ):
+        super().__init__()
+
+        self.layer_norm_first = layer_norm_first
+
+        from timm.models.vision_transformer import DropPath, Mlp
+
+        self.norm1 = norm_layer(q_dim)
+        self.attn = EncDecAttention(
+            q_dim,
+            kv_dim,
+            num_heads=num_heads,
+            qkv_bias=qkv_bias,
+            qk_scale=qk_scale,
+            attn_drop=attn_drop,
+            proj_drop=drop,
+            cosine_attention=cosine_attention,
+        )
+
+        self.drop_path = DropPath(drop_path) if drop_path > 0.0 else nn.Identity()
+        self.norm2 = norm_layer(q_dim)
+        mlp_hidden_dim = int(q_dim * mlp_ratio)
+        self.mlp = Mlp(
+            in_features=q_dim,
+            hidden_features=mlp_hidden_dim,
+            act_layer=act_layer,
+            drop=mlp_drop,
+        )
+        self.post_mlp_dropout = nn.Dropout(post_mlp_drop, inplace=False)
+        self.first_residual = first_residual
+
+    def forward(self, q, kv, padding_mask=None, alibi_bias=None):
+        r = q if self.first_residual else 0
+        if self.layer_norm_first:
+            x = r + self.drop_path(
+                self.attn(self.norm1(q), kv, padding_mask, alibi_bias)
+            )
+            r = x = self.mlp(self.norm2(x))
+            x = r + self.drop_path(self.post_mlp_dropout(x))
+        else:
+            x = r + self.drop_path(self.attn(q, kv, padding_mask, alibi_bias))
+            r = x = self.norm1(x)
+            x = self.mlp(x)
+            x = self.norm2(r + self.drop_path(self.post_mlp_dropout(x)))
+
+        return x
+
+
+class EncDecTransformerDecoder(nn.Module):
+    def __init__(self, cfg: D2vDecoderConfig, input_dim):
+        super().__init__()
+
+        self.input_proj = nn.Linear(input_dim, cfg.decoder_dim)
+
+        self.blocks = nn.Sequential(
+            *[
+                EncDecBlock(
+                    q_dim=cfg.decoder_dim,
+                    kv_dim=input_dim,
+                    num_heads=8,
+                    mlp_ratio=4.0,
+                    qkv_bias=True,
+                    qk_scale=None,
+                    drop=0.0,
+                    attn_drop=0.0,
+                    mlp_drop=0.0,
+                    post_mlp_drop=0.0,
+                    drop_path=0.0,
+                    act_layer=nn.GELU,
+                    norm_layer=nn.LayerNorm,
+                    layer_norm_first=False,
+                    cosine_attention=False,
+                    first_residual=i > 0,
+                )
+                for i in range(cfg.decoder_layers)
+            ]
+        )
+
+        self.proj = nn.Linear(cfg.decoder_dim, input_dim)
+
+    def reset_parameters(self):
+        from fairseq.modules.transformer_sentence_encoder import init_bert_params
+
+        self.apply(init_bert_params)
+
+    def forward(self, x, kv):
+        x = self.input_proj(x)
+        for i, layer in enumerate(self.blocks):
+            x = layer(x, kv)
+
+        x = self.proj(x)
+        return x

fairseq/examples/data2vec/models/modalities/text.py

@@ -0,0 +1,161 @@
+# Copyright (c) Facebook, Inc. and its affiliates.
+#
+# This source code is licensed under the MIT license found in the
+# LICENSE file in the root directory of this source tree.
+
+import math
+from dataclasses import dataclass
+from functools import partial
+from typing import Callable, Dict, Optional
+
+import torch.nn as nn
+import torch.nn.functional as F
+import numpy as np
+from fairseq.modules import PositionalEmbedding, FairseqDropout, LayerNorm
+from fairseq.tasks import FairseqTask
+from .base import D2vModalityConfig, ModalitySpecificEncoder, get_alibi_bias
+from .modules import BlockEncoder, Decoder1d
+from examples.data2vec.data.modality import Modality
+
+
+@dataclass
+class D2vTextConfig(D2vModalityConfig):
+    type: Modality = Modality.TEXT
+    max_source_positions: int = 512
+    learned_pos: bool = True
+    dropout: float = 0.1  # used for both local_encoder and contextualized encoder. tied with global transformer in data2vec_text
+
+    no_scale_embedding: bool = True
+    layernorm_embedding: bool = True
+    no_token_positional_embeddings: bool = False
+
+
+class TextEncoder(ModalitySpecificEncoder):
+
+    modality_cfg: D2vTextConfig
+
+    def __init__(
+        self,
+        modality_cfg: D2vTextConfig,
+        embed_dim: int,
+        make_block: Callable[[float], nn.ModuleList],
+        norm_layer: Callable[[int], nn.LayerNorm],
+        layer_norm_first: bool,
+        alibi_biases: Dict,
+        task: Optional[FairseqTask],
+    ):
+        self.pad_idx = task.source_dictionary.pad()
+        self.vocab_size = len(task.source_dictionary)
+
+        local_encoder = TextLocalEncoder(
+            vocab_size=self.vocab_size,
+            embed_dim=embed_dim,
+            max_source_positions=modality_cfg.max_source_positions,
+            pad_idx=self.pad_idx,
+            no_scale_embedding=modality_cfg.no_scale_embedding,
+            layernorm_embedding=modality_cfg.layernorm_embedding,
+            dropout=modality_cfg.dropout,
+            no_token_positional_embeddings=modality_cfg.no_token_positional_embeddings,
+            learned_pos=modality_cfg.learned_pos,
+        )
+        dpr = np.linspace(
+            modality_cfg.start_drop_path_rate,
+            modality_cfg.end_drop_path_rate,
+            modality_cfg.prenet_depth,
+        )
+        context_encoder = BlockEncoder(
+            nn.ModuleList(make_block(dpr[i]) for i in range(modality_cfg.prenet_depth)),
+            norm_layer(embed_dim)
+            if not layer_norm_first and modality_cfg.prenet_depth > 0
+            else None,
+            layer_norm_first,
+            modality_cfg.prenet_layerdrop,
+            modality_cfg.prenet_dropout if modality_cfg.prenet_depth > 0 else 0.0,
+        )
+        decoder = (
+            Decoder1d(modality_cfg.decoder, embed_dim)
+            if modality_cfg.decoder is not None
+            else None
+        )
+
+        alibi_bias_fn = partial(get_alibi_bias, alibi_biases=alibi_biases)
+
+        super().__init__(
+            modality_cfg=modality_cfg,
+            embed_dim=embed_dim,
+            local_encoder=local_encoder,
+            project_features=nn.Identity(),
+            fixed_positional_encoder=None,
+            relative_positional_encoder=None,
+            context_encoder=context_encoder,
+            decoder=decoder,
+            get_alibi_bias=alibi_bias_fn,
+        )
+
+    def reset_parameters(self):
+        super().reset_parameters()
+
+    def convert_padding_mask(self, x, padding_mask):
+        if padding_mask is None or padding_mask.size(1) == x.size(1):
+            return padding_mask
+
+        diff = self.downsample - padding_mask.size(1) % self.downsample
+        if 0 < diff < self.downsample:
+            padding_mask = F.pad(padding_mask, (0, diff), value=True)
+
+        padding_mask = padding_mask.view(padding_mask.size(0), -1, self.downsample)
+        padding_mask = padding_mask.all(-1)
+        if padding_mask.size(1) > x.size(1):
+            padding_mask = padding_mask[:, : x.size(1)]
+
+        assert x.size(1) == padding_mask.size(
+            1
+        ), f"{x.size(1), padding_mask.size(1), diff, self.downsample}"
+
+        return padding_mask
+
+
+class TextLocalEncoder(nn.Module):
+    def __init__(
+        self,
+        vocab_size,
+        embed_dim,
+        max_source_positions,
+        pad_idx,
+        no_scale_embedding,
+        layernorm_embedding,
+        dropout,
+        no_token_positional_embeddings,
+        learned_pos,
+    ):
+        super().__init__()
+        self.pad_idx = pad_idx
+        self.dropout_module = FairseqDropout(dropout)
+
+        self.embed_tokens = nn.Embedding(vocab_size, embed_dim, pad_idx)
+        self.embed_scale = 1.0 if no_scale_embedding else math.sqrt(embed_dim)
+        self.embed_positions = (
+            PositionalEmbedding(
+                max_source_positions,
+                embed_dim,
+                pad_idx,
+                learned=learned_pos,
+            )
+            if not no_token_positional_embeddings
+            else None
+        )
+        self.embed_scale = 1.0 if no_scale_embedding else math.sqrt(embed_dim)
+
+        self.layernorm_embedding = None
+        if layernorm_embedding:
+            self.layernorm_embedding = LayerNorm(embed_dim)
+
+    def forward(self, src_tokens):
+        x = self.embed_scale * self.embed_tokens(src_tokens)
+        if self.embed_positions is not None:
+            x = x + self.embed_positions(src_tokens)
+
+        if self.layernorm_embedding is not None:
+            x = self.layernorm_embedding(x)
+        x = self.dropout_module(x)
+        return x

fairseq/examples/data2vec/models/utils.py

@@ -0,0 +1,55 @@
+import math
+import torch
+
+def get_alibi(
+    max_positions: int,
+    attention_heads: int,
+):
+    def get_slopes(n):
+        def get_slopes_power_of_2(n):
+            start = 2 ** (-(2 ** -(math.log2(n) - 3)))
+            ratio = start
+            return [start * ratio ** i for i in range(n)]
+
+        # In the paper, we only train models that have 2^a heads for some
+        # a. This function has some good properties that only occur when
+        # the input is a power of 2. To maintain that even when the number
+        # of heads is not a power of 2, we use this workaround.
+        if math.log2(n).is_integer():
+            return get_slopes_power_of_2(n)
+        else:
+            closest_power_of_2 = 2 ** math.floor(math.log2(n))
+            return (
+                get_slopes_power_of_2(closest_power_of_2)
+                + get_slopes(2 * closest_power_of_2)[0::2][: n - closest_power_of_2]
+            )
+
+    maxpos = max_positions
+    attn_heads = attention_heads
+    slopes = torch.Tensor(get_slopes(attn_heads))
+    # prepare alibi position linear bias. Note that wav2vec2 is non
+    # autoregressive model so we want a symmetric mask with 0 on the
+    # diagonal and other wise linear decreasing valuees
+    pos_bias = (
+        torch.abs(
+            torch.arange(maxpos).unsqueeze(0) - torch.arange(maxpos).unsqueeze(1)
+        )
+        * -1
+    )
+    alibi_bias = slopes.unsqueeze(1).unsqueeze(1) * pos_bias.unsqueeze(0).expand(
+        attn_heads, -1, -1
+    )
+    return alibi_bias
+
+def masked_alibi(alibi_bias, mask_indices, orig_B, orig_T):
+    alibi_bias = alibi_bias.view(orig_B, -1, orig_T, orig_T)
+    H = alibi_bias.size(1)
+    alibi_mask = mask_indices.unsqueeze(1)
+    alibi_bias = alibi_bias.masked_select(alibi_mask.unsqueeze(-1))
+    alibi_bias = alibi_bias.view(orig_B, H, -1, orig_T)
+    M = alibi_bias.size(-2)
+    alibi_bias = alibi_bias.masked_select(alibi_mask.unsqueeze(-2))
+    alibi_bias = alibi_bias.view(-1, M, M)
+    return alibi_bias
+
+

fairseq/examples/data2vec/scripts/convert_audioset_labels.py

@@ -0,0 +1,63 @@
+#!/usr/bin/env python3
+# Copyright (c) Facebook, Inc. and its affiliates.
+#
+# This source code is licensed under the MIT license found in the
+# LICENSE file in the root directory of this source tree.
+
+import argparse
+import os
+
+
+def get_parser():
+    parser = argparse.ArgumentParser(description="convert audioset labels")
+    # fmt: off
+    parser.add_argument('in_file', help='audioset csv file to convert')
+    parser.add_argument('--manifest', required=True, metavar='PATH', help='wav2vec-like manifest')
+    parser.add_argument('--descriptors', required=True, metavar='PATH', help='path to label descriptor file')
+    parser.add_argument('--output', required=True, metavar='PATH', help='where to output converted labels')
+    # fmt: on
+
+    return parser
+
+
+def main():
+    parser = get_parser()
+    args = parser.parse_args()
+
+    label_descriptors = {}
+    with open(args.descriptors, "r") as ldf:
+        next(ldf)
+        for line in ldf:
+            if line.strip() == "":
+                continue
+
+            items = line.split(",")
+            assert len(items) > 2, line
+            idx = items[0]
+            lbl = items[1]
+            assert lbl not in label_descriptors, lbl
+            label_descriptors[lbl] = idx
+
+    labels = {}
+    with open(args.in_file, "r") as ifd:
+        for line in ifd:
+            if line.lstrip().startswith("#"):
+                continue
+            items = line.rstrip().split(",")
+            id = items[0].strip()
+            start = items[1].strip()
+            end = items[2].strip()
+            lbls = [label_descriptors[it.strip(' "')] for it in items[3:]]
+            labels[id] = [start, end, ",".join(lbls)]
+
+    with open(args.manifest, "r") as mf, open(args.output, "w") as of:
+        next(mf)
+        for line in mf:
+            path, _ = line.split("\t")
+            id = os.path.splitext(os.path.basename(path))[0]
+            lbl = labels[id]
+            print("\t".join(lbl), file=of)
+
+
+if __name__ == "__main__":
+    main()

fairseq/examples/data2vec/scripts/multi/finetune_all_fair_aws_local_lr.sh

@@ -0,0 +1,18 @@
+#!/bin/bash
+
+set -eu
+
+job_id="$1"
+task_id="$2"
+dir="$3"
+
+echo "job_id: $job_id, task_id: $task_id, dir: $dir"
+
+mkdir -p "$dir/log"
+sbatch_args="-p wav2vec --nodes=1 --ntasks-per-node=1"
+sbatch_args="$sbatch_args --gpus-per-node=1 --cpus-per-task=8 --mem=0 --time=24:00:00"
+sbatch_args="$sbatch_args -d afterok:$job_id -o $dir/log/decode_sweep_%A.out"
+sbatch_args="$sbatch_args -e $dir/log/decode_sweep_%A.err"
+
+sbatch $sbatch_args examples/data2vec/scripts/multi/finetune_all_fair_local_lr.sh $dir
+

fairseq/examples/data2vec/scripts/multi/finetune_all_fair_aws_local_lr_nodep.sh

@@ -0,0 +1,16 @@
+#!/bin/bash
+
+set -eu
+
+dir="$1"
+
+echo "dir: $dir"
+
+mkdir -p "$dir/log"
+sbatch_args="-p wav2vec --nodes=1 --ntasks-per-node=1"
+sbatch_args="$sbatch_args --gpus-per-node=1 --cpus-per-task=8 --mem=0 --time=24:00:00"
+sbatch_args="$sbatch_args -o $dir/log/decode_sweep_%A.out"
+sbatch_args="$sbatch_args -e $dir/log/decode_sweep_%A.err"
+
+sbatch $sbatch_args examples/data2vec/scripts/multi/finetune_all_fair_local_lr.sh $dir
+

fairseq/examples/data2vec/scripts/multi/finetune_all_fair_local_lr.sh

@@ -0,0 +1,28 @@
+#!/usr/bin/env zsh
+
+dir="$1"
+cp="$dir/checkpoints/checkpoint_last.pt"
+
+echo "dir: $dir"
+
+declare -A tasks
+tasks[cola]="/fsx-wav2vec/abaevski/data/nlp/GLUE/CoLA-bin"
+tasks[qnli]="/fsx-wav2vec/abaevski/data/nlp/GLUE/QNLI-bin"
+tasks[mrpc]="/fsx-wav2vec/abaevski/data/nlp/GLUE/MRPC-bin"
+tasks[rte]="/fsx-wav2vec/abaevski/data/nlp/GLUE/RTE-bin"
+tasks[sst_2]="/fsx-wav2vec/abaevski/data/nlp/GLUE/SST-2-bin"
+tasks[mnli]="/fsx-wav2vec/abaevski/data/nlp/GLUE/MNLI-bin"
+tasks[qqp]="/fsx-wav2vec/abaevski/data/nlp/GLUE/QQP-bin"
+tasks[sts_b]="/fsx-wav2vec/abaevski/data/nlp/GLUE/STS-B-bin"
+
+lrs=(5e-6 8e-6 1e-5 2e-5)
+
+for task data_path in ${(kv)tasks}; do
+    for lr in $lrs; do
+      echo $lr $task
+      PYTHONPATH=. PREFIX="${PREFIX}" SUFFIX="" \
+        python fairseq_cli/hydra_train.py -m --config-dir examples/data2vec/config/multi/text_finetuning \
+        --config-name $task +run_config=local task.data="$data_path" common.log_interval=200 dataset.num_workers=1 \
+        model.model_path="$cp" hydra.sweep.dir="$dir/finetune_lr/$task/$lr" "optimization.lr=[${lr}]" +model=text_wrap
+    done
+done

fairseq/examples/data2vec/scripts/text/finetune_all_char_fair_aws_local_lr.sh

@@ -0,0 +1,17 @@
+#!/bin/bash
+
+set -eu
+
+job_id="$1"
+task_id="$2"
+dir="$3"
+
+echo "job_id: $job_id, task_id: $task_id, dir: $dir"
+
+mkdir -p "$dir/log"
+sbatch_args="-p wav2vec --nodes=1 --ntasks-per-node=1"
+sbatch_args="$sbatch_args --gpus-per-node=1 --cpus-per-task=8 --mem=0 --time=24:00:00"
+sbatch_args="$sbatch_args -d afterok:$job_id -o $dir/log/ft_%A.out"
+sbatch_args="$sbatch_args -e $dir/log/ft_%A.err"
+
+sbatch $sbatch_args examples/data2vec/scripts/text/finetune_all_char_fair_local_lr.sh $dir

fairseq/examples/data2vec/scripts/text/finetune_all_fair.sh

@@ -0,0 +1,21 @@
+#!/usr/bin/env zsh
+
+job_id=$1
+task_id=$2
+dir="$3"
+cp="$dir/$task_id/checkpoints/checkpoint_last.pt"
+
+echo "job_id: $job_id, task_id: $task_id, dir: $dir"
+
+declare -A tasks
+tasks[cola]="/private/home/jgu/data/GLUE/CoLA-bin"
+tasks[qnli]="/private/home/jgu/data/GLUE/QNLI-bin"
+tasks[mrpc]="/private/home/jgu/data/GLUE/MRPC-bin"
+tasks[rte]="/private/home/jgu/data/GLUE/RTE-bin"
+tasks[sst_2]="/private/home/jgu/data/GLUE/SST-2-bin"
+
+for task data_path in ${(kv)tasks}; do
+    PYTHONPATH=. PREFIX="${PREFIX}" SUFFIX="" nohup python fairseq_cli/hydra_train.py -m --config-dir examples/roberta/config/finetuning \
+    --config-name $task hydra/launcher=submitit_slurm +run_config=slurm_1g task.data="$data_path" hydra.launcher.name=finetune_${task}_${PREFIX} \
+    checkpoint.restore_file="$cp" +hydra.launcher.additional_parameters.dependency="afterok:$job_id" hydra.sweep.dir="$dir/finetune/$task" &
+done

fairseq/examples/data2vec/scripts/text/finetune_all_fair_aws.sh

@@ -0,0 +1,21 @@
+#!/usr/bin/env zsh
+
+job_id=$1
+task_id=$2
+dir="$3"
+cp="$dir/checkpoints/checkpoint_last.pt"
+
+echo "job_id: $job_id, task_id: $task_id, dir: $dir"
+
+declare -A tasks
+tasks[cola]="/fsx-wav2vec/abaevski/data/nlp/GLUE/CoLA-bin"
+tasks[qnli]="/fsx-wav2vec/abaevski/data/nlp/GLUE/QNLI-bin"
+tasks[mrpc]="/fsx-wav2vec/abaevski/data/nlp/GLUE/MRPC-bin"
+tasks[rte]="/fsx-wav2vec/abaevski/data/nlp/GLUE/RTE-bin"
+tasks[sst_2]="/fsx-wav2vec/abaevski/data/nlp/GLUE/SST-2-bin"
+
+for task data_path in ${(kv)tasks}; do
+    PYTHONPATH=. PREFIX="${PREFIX}" SUFFIX="" nohup python fairseq_cli/hydra_train.py -m --config-dir examples/roberta/config/finetuning \
+    --config-name $task hydra/launcher=submitit_slurm +run_config=slurm_1g_aws task.data="$data_path" hydra.launcher.name=finetune_${task}_${PREFIX} \
+    checkpoint.restore_file="$cp" +hydra.launcher.additional_parameters.dependency="afterok:$job_id" hydra.sweep.dir="$dir/finetune/$task" &
+done

fairseq/examples/data2vec/scripts/text/finetune_all_fair_aws_local_lr.sh

@@ -0,0 +1,17 @@
+#!/bin/bash
+
+set -eu
+
+job_id="$1"
+task_id="$2"
+dir="$3"
+
+echo "job_id: $job_id, task_id: $task_id, dir: $dir"
+
+mkdir -p "$dir/log"
+sbatch_args="-p wav2vec --nodes=1 --ntasks-per-node=1"
+sbatch_args="$sbatch_args --gpus-per-node=1 --cpus-per-task=8 --mem=0 --time=24:00:00"
+sbatch_args="$sbatch_args -d afterok:$job_id -o $dir/log/decode_sweep_%A.out"
+sbatch_args="$sbatch_args -e $dir/log/decode_sweep_%A.err"
+
+sbatch $sbatch_args examples/data2vec/scripts/text/finetune_all_fair_local_lr.sh $dir

fairseq/examples/data2vec/scripts/text/finetune_all_fair_aws_lr.sh

@@ -0,0 +1,23 @@
+#!/usr/bin/env zsh
+
+job_id=$1
+task_id=$2
+dir="$3"
+cp="$dir/checkpoints/checkpoint_last.pt"
+
+echo "job_id: $job_id, task_id: $task_id, dir: $dir"
+
+declare -A tasks
+tasks[cola]="/fsx-wav2vec/abaevski/data/nlp/GLUE/CoLA-bin"
+tasks[qnli]="/fsx-wav2vec/abaevski/data/nlp/GLUE/QNLI-bin"
+tasks[mrpc]="/fsx-wav2vec/abaevski/data/nlp/GLUE/MRPC-bin"
+tasks[rte]="/fsx-wav2vec/abaevski/data/nlp/GLUE/RTE-bin"
+tasks[sst_2]="/fsx-wav2vec/abaevski/data/nlp/GLUE/SST-2-bin"
+
+for task data_path in ${(kv)tasks}; do
+    for lr in 5e-6 8e-6 1e-5 2e-5 5e-5 8e-5 1e-4 2e-4; do
+      PYTHONPATH=. PREFIX="${PREFIX}" SUFFIX="" nohup python fairseq_cli/hydra_train.py -m --config-dir examples/roberta/config/finetuning \
+      --config-name $task hydra/launcher=submitit_slurm +run_config=slurm_1g_aws task.data="$data_path" hydra.launcher.name=finetune_${task}_${PREFIX} \
+      checkpoint.restore_file="$cp" +hydra.launcher.additional_parameters.dependency="afterok:$job_id" hydra.sweep.dir="$dir/finetune_lr/$task/$lr" "optimization.lr=[${lr}]" &
+    done
+done

fairseq/examples/data2vec/scripts/text/finetune_all_fair_local_lr.sh

@@ -0,0 +1,25 @@
+#!/usr/bin/env zsh
+
+dir="$1"
+cp="$dir/checkpoints/checkpoint_last.pt"
+
+echo "dir: $dir"
+
+declare -A tasks
+tasks[cola]="/fsx-wav2vec/abaevski/data/nlp/GLUE/CoLA-bin"
+tasks[qnli]="/fsx-wav2vec/abaevski/data/nlp/GLUE/QNLI-bin"
+tasks[mrpc]="/fsx-wav2vec/abaevski/data/nlp/GLUE/MRPC-bin"
+tasks[rte]="/fsx-wav2vec/abaevski/data/nlp/GLUE/RTE-bin"
+tasks[sst_2]="/fsx-wav2vec/abaevski/data/nlp/GLUE/SST-2-bin"
+
+lrs=(5e-6 8e-6 1e-5 2e-5)
+
+for task data_path in ${(kv)tasks}; do
+    for lr in $lrs; do
+      echo $lr $task
+      PYTHONPATH=. PREFIX="${PREFIX}" SUFFIX="" \
+        python fairseq_cli/hydra_train.py -m --config-dir examples/roberta/config/finetuning \
+        --config-name $task +run_config=local task.data="$data_path" common.log_interval=200 dataset.num_workers=1 \
+        checkpoint.restore_file="$cp" hydra.sweep.dir="$dir/finetune_lr/$task/$lr" "optimization.lr=[${lr}]"
+    done
+done