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README.md
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@@ -45,11 +45,43 @@ This dataset contains 1024x1024 patches of a group of histopathology images take
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## Usage
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```python
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from datasets import load_dataset
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dataset = load_dataset("Cilem/histopathology-1024")
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-
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```
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## Usage
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- [CAMELYON16](http://gigadb.org/dataset/100439): List of images taken from CAMELYON16 dataset:
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* `test_001.tif`
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* `test_002.tif`
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* `test_003.tif`
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* `test_004.tif`
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* `test_005.tif`
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* `test_006.tif`
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* `test_007.tif`
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* `test_008.tif`
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* `test_009.tif`
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* `test_010.tif`
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* `test_011.tif`
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* `test_012.tif`
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* `test_013.tif`
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* `test_014.tif`
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* `test_015.tif`
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* `test_016.tif`
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* `test_017.tif`
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* `test_018.tif`
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* `test_019.tif`
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* `test_020.tif`
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* Create a folder named ***wsi*** and download the images given in the list. Then:
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```python
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from datasets import load_dataset
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import openslide as ops
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dataset = load_dataset("Cilem/histopathology-1024")
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slide_name = dataset['train'][0]['slide_name']
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resize = dataset['train'][0]['resize']
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path = os.path.join('wsi', slide_name)
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slide = ops.OpenSlide(path)
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patch = slide.read_region((x, y), 0, patch_size)
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patch = patch.resize(resize)
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display(patch)
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```
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