Datasets:
Modalities:
Text
Formats:
csv
Size:
1K - 10K
Tags:
casimedicos
explainability
medical exams
medical question answering
multilinguality
argument mining
License:
Update README.md
Browse files
README.md
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---
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license: cc-by-4.0
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---
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license: cc-by-4.0
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language:
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- en
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- es
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- fr
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- it
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tags:
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- casimedicos
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- explainability
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- medical exams
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- medical question answering
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- multilinguality
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- LLMs
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- LLM
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pretty_name: MedExpQA
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configs:
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- config_name: en
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data_files:
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- split: train
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path:
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- en/train_en_ordered.jsonl
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- split: validation
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path:
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- en/validation_en_ordered.jsonl
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- split: test
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path:
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- en/test_en_ordered.jsonl
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- config_name: es
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data_files:
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- split: train
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path:
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- es/train_es_ordered.jsonl
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- split: validation
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path:
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- es/validation_es_ordered.jsonl
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- split: test
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path:
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- es/test_es_ordered.jsonl
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- config_name: fr
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data_files:
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- split: train
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path:
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- fr/train_fr_ordered.jsonl
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- split: validation
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path:
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- fr/validation_fr_ordered.jsonl
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- split: test
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path:
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- fr/test_fr_ordered.jsonl
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- config_name: it
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data_files:
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- split: train
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path:
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- it/train_it_ordered.jsonl
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- split: validation
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path:
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- it/validation_it_ordered.jsonl
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- split: test
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path:
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- it/test_it_ordered.jsonl
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task_categories:
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- text-generation
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- question-answering
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size_categories:
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- 1K<n<10K
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---
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<p align="center">
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<br>
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<img src="http://www.ixa.eus/sites/default/files/anitdote.png" style="height: 200px;">
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<br>
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# CasiMedicos-Arg: A Medical Question Answering Dataset Annotated with Explanatory Argumentative Structures
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[CasiMedicos-Arg](https://huggingface.co/datasets/HiTZ/casimedicos-arg) is, to the best of our knowledge, the first
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multilingual dataset for Medical Question Answering where correct and incorrect diagnoses for a clinical case are
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enriched with a natural language explanation written by doctors.
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The [casimedicos-exp](https://huggingface.co/datasets/HiTZ/casimedicos-exp) have been manually annotated with
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argument components (i.e., premise, claim) and argument relations (i.e., attack, support).
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Thus, Multilingual CasiMedicos-arg dataset consists of 558 clinical cases (English, Spanish, French, Italian) with explanations,
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where we annotated 5021 claims, 2313 premises, 2431 support relations, and 1106 attack relations.
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<table style="width:33%">
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<tr>
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<th>Antidote CasiMedicos-Arg splits</th>
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<tr>
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<td>train</td>
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<td>434</td>
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</tr>
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<tr>
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<td>validation</td>
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<td>63</td>
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</tr>
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<tr>
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<td>test</td>
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<td>125</td>
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</tr>
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</table>
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- 📖 Paper:[CasiMedicos-Arg: A Medical Question Answering Dataset Annotated with Explanatory Argumentative Structures](https://aclanthology.org/2024.emnlp-main.1026/)
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- 💻 Github Repo (Data and Code): [https://github.com/ixa-ehu/antidote-casimedicos](https://github.com/ixa-ehu/antidote-casimedicos)
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- 🌐 Project Website: [https://univ-cotedazur.eu/antidote](https://univ-cotedazur.eu/antidote)
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- Funding: CHIST-ERA XAI 2019 call. Antidote (PCI2020-120717-2) funded by MCIN/AEI /10.13039/501100011033 and by European Union NextGenerationEU/PRTR
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## Example of Document in Antidote CasiMedicos Dataset
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<p align="center">
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<img src="https://github.com/ixa-ehu/antidote-casimedicos/blob/main/casimedicos-exp.png?raw=true" style="height: 600px;">
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</p>
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## Results of Argument Component Detection using LLMs
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<p align="left">
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<img src="https://github.com/antidote-casimedicos/blob/main/multilingual-data-transfer.png?raw=true" style="height: 300px;">
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</p>
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## Citation
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If you use CasiMedicos-Arg then please **cite the following paper**:
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```bibtex
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@inproceedings{sviridova-etal-2024-casimedicos,
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title = {{CasiMedicos-Arg: A Medical Question Answering Dataset Annotated with Explanatory Argumentative Structures}},
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author = "Sviridova, Ekaterina and
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Yeginbergen, Anar and
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Estarrona, Ainara and
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Cabrio, Elena and
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Villata, Serena and
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Agerri, Rodrigo",
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booktitle = "Proceedings of the 2024 Conference on Empirical Methods in Natural Language Processing",
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year = "2024",
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url = "https://aclanthology.org/2024.emnlp-main.1026",
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pages = "18463--18475"
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}
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```
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**Contact**: [Rodrigo Agerri](https://ragerri.github.io/)
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HiTZ Center - Ixa, University of the Basque Country UPV/EHU
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