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- license: cc-by-4.0
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+ ---
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+ license: cc-by-4.0
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+ thumbnail: "https://github.com/user-attachments/assets/8ae905f3-6884-45cb-bd50-0838a5c8e3db"
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+ ---
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+
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+ <!DOCTYPE html>
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+ <html lang="en">
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+ <head>
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+ <meta charset="UTF-8">
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+ <meta name="viewport" content="width=device-width, initial-scale=1.0">
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+ <title>Data Card</title>
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+ <link href="https://fonts.googleapis.com/css2?family=Quicksand:wght@400;500;600&display=swap" rel="stylesheet">
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+ <style>
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+ body {
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+ font-family: 'Quicksand', sans-serif;
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+ padding-left: 10px
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+ }
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+ .container {
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+ width: 100%;
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+ margin: auto;
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+ background-color: rgb(0 0 0 / 75%) !important;
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+ }
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+ }
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+ margin-left: 5px;
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+ overflow-x: auto;
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+ margin-top: 20px;
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+ border: 1px solid rgba(255, 255, 255, 0.05);
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+ transition: background-color 0.6s ease;
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+ }
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+ .info img {
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+ width: 100%;
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+ border-radius: 10px 10px 0 0;
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+ margin-top: -20px;
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+ }
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+ a {
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+ color: #88C0D0;
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+ text-decoration: none;
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+ transition: color 0.3s ease;
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+ position: relative;
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+ }
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+ color: #A3BE8C;
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+ }
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+ }
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+ a:hover::before {
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+ transform: scaleX(1);
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+ }
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+ .button {
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+ display: inline-block;
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+ background-color: #5E81AC;
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+ color: #E5E9F0;
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+ padding: 10px 20px;
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+ border-radius: 5px;
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+ cursor: pointer;
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+ text-decoration: none;
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+ transition: background-color 0.3s ease;
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+ }
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+ .button:hover {
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+ background-color: #81A1C1;
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+ }
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+ </style>
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+ </head>
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+ <body>
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+ <div class="container">
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+ <div class="header">
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+ <h1>Caduceus Project Dataset</h1>
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+ </div>
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+ <div class="info">
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+ <img src="https://cdn-uploads.huggingface.co/production/uploads/6589d7e6586088fd2784a12c/E3lAz6VYaM7PLodDOcOcV.png" alt="Caduceus Project" style="border-radius: 10px;">
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+ <p><strong>Creator:</strong> <a href="https://github.com/your_username" target="_blank">Your Name</a></p>
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+ <div>
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+ <p><strong>About the Dataset:</strong> The Caduceus Project Dataset is a curated collection of scientific and medical protocols sourced from <a href="https://github.com/protocolsio/protocols" target="_blank">protocols.io</a> and converted from PDF to markdown format. This dataset aims to enhance the accessibility and usability of complex scientific and medical information by providing a structured and easily readable version of the protocols.</p>
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+ <p><strong>Source Data:</strong></p>
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+ <ul>
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+ <li>Protocols from <a href="https://github.com/protocolsio/protocols" target="_blank">protocols.io</a></li>
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+ </ul>
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+ <p><strong>Key Features:</strong></p>
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+ <ul>
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+ <li>Carefully selected high-quality protocols</li>
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+ <li>Converted from PDF to markdown format for improved readability</li>
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+ <li>Structured organization with individual markdown files and a JSONL file</li>
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+ <li>Quality assessment based on word count and measurements ratio</li>
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+ <li>Density maps visualizing word counts and measurements ratios</li>
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+ </ul>
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+ <p><strong>Dataset Structure:</strong></p>
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+ <ul>
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+ <li><code>original_pdfs/</code>: Contains the original PDF files of the selected protocols.</li>
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+ <li><code>markdown_files/</code>: Contains the individual markdown files converted from the selected PDF files.</li>
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+ <li><code>jsonl_output/</code>: Contains the JSONL files with the converted markdown content of all the selected protocols. One has the base64 versions of the PDF, and the other has the text from the PDF.</li>
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+ </ul>
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+ <p><strong>License:</strong> The Caduceus Project Dataset is released under the <a href="https://creativecommons.org/licenses/by/4.0/" target="_blank">Creative Commons Attribution 4.0 International (CC BY 4.0) License</a>.</p>
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+ <p><strong>Acknowledgments:</strong> We would like to express our gratitude to the contributors of <a href="https://github.com/protocolsio/protocols" target="_blank">protocols.io</a> for providing the open-source repository of scientific and medical protocols that served as the foundation for this dataset.</p>
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+ </div>
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+ </div>
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+ </div>
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+ </body>
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+ </html>