remove unzip

oas-paired-sequence-data.py

@@ -122,21 +122,20 @@ class OasPairedSequenceData(datasets.GeneratorBasedBuilder):
 
     def _generate_examples(self, filepaths):
         for filepath in filepaths:
-            with gzip.open(filepath) as z:
-                with open(z, "r") as f:
-                    reader = csv.reader(f, delimiter=",")
-                    for key, row in enumerate(reader):
-                        if key < 2:
-                            continue
-                        else:
-                            yield key - 2, {
-                                "sequence_alignment_aa_heavy": row[10],
-                                "cdr1_aa_heavy": row[35],
-                                "cdr2_aa_heavy": row[39],
-                                "cdr3_aa_heavy": row[43],
-                                "sequence_alignment_aa_light": row[100],
-                                "cdr1_aa_light": row[123],
-                                "cdr2_aa_light": row[127],
-                                "cdr3_aa_light": row[131],
-                            }
+            with open(filepath, "r") as f:
+                reader = csv.reader(f, delimiter=",")
+                for key, row in enumerate(reader):
+                    if key < 2:
+                        continue
+                    else:
+                        yield key - 2, {
+                            "sequence_alignment_aa_heavy": row[10],
+                            "cdr1_aa_heavy": row[35],
+                            "cdr2_aa_heavy": row[39],
+                            "cdr3_aa_heavy": row[43],
+                            "sequence_alignment_aa_light": row[100],
+                            "cdr1_aa_light": row[123],
+                            "cdr2_aa_light": row[127],
+                            "cdr3_aa_light": row[131],
+                        }