farrell236
commited on
Commit
•
11a4b70
1
Parent(s):
69b7c4a
Update README.md
Browse files
README.md
CHANGED
@@ -1,6 +1,12 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
# The Cancer Genome Atlas Ovarian Cancer (NSCLC-Radiomics)
|
2 |
|
3 |
-
The models featured in this repository uses images from the
|
4 |
|
5 |
Download the data from TCIA with **Descriptive Directory Name** download option.
|
6 |
|
@@ -8,7 +14,7 @@ Download the data from TCIA with **Descriptive Directory Name** download option.
|
|
8 |
|
9 |
Convert DICOM images and segmentation to NIFTI format using [pydicom](https://pydicom.github.io/) and [pydicom-seg](https://razorx89.github.io/pydicom-seg/guides/read.html). Run:
|
10 |
|
11 |
-
```
|
12 |
user@machine:~/NSCLC-Radiomics-NIFTI$ python convert.py
|
13 |
```
|
14 |
|
@@ -65,4 +71,4 @@ TCIA Citation
|
|
65 |
The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository,
|
66 |
Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057.
|
67 |
https://doi.org/10.1007/s10278-013-9622-7
|
68 |
-
```
|
|
|
1 |
+
---
|
2 |
+
license: cc-by-3.0
|
3 |
+
tags:
|
4 |
+
- medical
|
5 |
+
---
|
6 |
+
|
7 |
# The Cancer Genome Atlas Ovarian Cancer (NSCLC-Radiomics)
|
8 |
|
9 |
+
The models featured in this repository uses images from the publicly available [NSCLC-Radiomics](https://wiki.cancerimagingarchive.net/display/Public/NSCLC-Radiomics) Dataset.
|
10 |
|
11 |
Download the data from TCIA with **Descriptive Directory Name** download option.
|
12 |
|
|
|
14 |
|
15 |
Convert DICOM images and segmentation to NIFTI format using [pydicom](https://pydicom.github.io/) and [pydicom-seg](https://razorx89.github.io/pydicom-seg/guides/read.html). Run:
|
16 |
|
17 |
+
```shell
|
18 |
user@machine:~/NSCLC-Radiomics-NIFTI$ python convert.py
|
19 |
```
|
20 |
|
|
|
71 |
The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository,
|
72 |
Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057.
|
73 |
https://doi.org/10.1007/s10278-013-9622-7
|
74 |
+
```
|