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0.metadata.json

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avg_residual.pt

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centroids.pt

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collection.json

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   "Numerous biological and physical processes can be modeled as systems of interacting entities evolving continuously over time, e.g. the dynamics of communicating cells or physical particles. Learning the dynamics of such systems is essential for predicting the temporal evolution of populations across novel samples and unseen environments. Flow-based models allow for learning these dynamics at the population level - they model the evolution of the entire distribution of samples. However, current flow-based models are limited to a single initial population and a set of predefined conditions which describe different dynamics. We argue that multiple processes in natural sciences have to be represented as vector fields on the Wasserstein manifold of probability densities. That is, the change of the population at any moment in time depends on the population itself due to the interactions between samples. In particular, this is crucial for personalized medicine where the development of diseases and their respective treatment response depends on the microenvironment of cells specific to each patient. We propose Meta Flow Matching (MFM), a practical approach to integrating along these vector fields on the Wasserstein manifold by amortizing the flow model over the initial populations. Namely, we embed the population of samples using a Graph Neural Network (GNN) and use these embeddings to train a Flow Matching model.",
   "Namely, we embed the population of samples using a Graph Neural Network (GNN) and use these embeddings to train a Flow Matching model. This gives MFM the ability to generalize over the initial distributions unlike previously proposed methods. We demonstrate the ability of MFM to improve prediction of individual treatment responses on a large scale multi-patient single-cell drug screen dataset.",
   "Language models have demonstrated remarkable performance in solving reasoning tasks; however, even the strongest models still occasionally make reasoning mistakes. Recently, there has been active research aimed at improving reasoning accuracy, particularly by using pretrained language models to \"self-correct\" their mistakes via multi-round prompting. In this paper, we follow this line of work but focus on understanding the usefulness of incorporating \"error-correction\" data directly into the pretraining stage. This data consists of erroneous solution steps immediately followed by their corrections. Using a synthetic math dataset, we show promising results: this type of pretrain data can help language models achieve higher reasoning accuracy directly (i.e., through simple auto-regression, without multi-round prompting) compared to pretraining on the same amount of error-free data. We also delve into many details, such as (1) how this approach differs from beam search, (2) how such data can be prepared, (3) whether masking is needed on the erroneous tokens, (4) the amount of error required, (5) whether such data can be deferred to the fine-tuning stage, and many others.",
-  "This paper introduces CURLoRA, a novel approach to fine-tuning large language models (LLMs) that leverages CUR matrix decomposition in the context of Low-Rank Adaptation (LoRA). Our method addresses two critical challenges in LLM fine-tuning: mitigating catastrophic forgetting during continual learning and reducing the number of trainable parameters. We propose a unique modification to the CUR decomposition process, utilizing inverted probabilities for column and row selection which acts as an implicit regularization, and initializing the U matrix as a zero matrix, and only fine-tuning it. We demonstrate through experiments on multiple datasets that CURLoRA outperforms standard LoRA in mitigating catastrophic forgetting. It maintains model stability and performance across tasks while significantly reducing the number of trainable parameters. Our results show that CURLoRA achieves very good and stable task accuracy while maintaining base model's perplexity scores fixed compared to LoRA upon continual fine-tuning, particularly in scenarios with limited data."
+  "This paper introduces CURLoRA, a novel approach to fine-tuning large language models (LLMs) that leverages CUR matrix decomposition in the context of Low-Rank Adaptation (LoRA). Our method addresses two critical challenges in LLM fine-tuning: mitigating catastrophic forgetting during continual learning and reducing the number of trainable parameters. We propose a unique modification to the CUR decomposition process, utilizing inverted probabilities for column and row selection which acts as an implicit regularization, and initializing the U matrix as a zero matrix, and only fine-tuning it. We demonstrate through experiments on multiple datasets that CURLoRA outperforms standard LoRA in mitigating catastrophic forgetting. It maintains model stability and performance across tasks while significantly reducing the number of trainable parameters. Our results show that CURLoRA achieves very good and stable task accuracy while maintaining base model's perplexity scores fixed compared to LoRA upon continual fine-tuning, particularly in scenarios with limited data.",
+  "The VoxCeleb Speaker Recognition Challenges (VoxSRC) were a series of challenges and workshops that ran annually from 2019 to 2023. The challenges primarily evaluated the tasks of speaker recognition and diarisation under various settings including: closed and open training data; as well as supervised, self-supervised, and semi-supervised training for domain adaptation. The challenges also provided publicly available training and evaluation datasets for each task and setting, with new test sets released each year. In this paper, we provide a review of these challenges that covers: what they explored; the methods developed by the challenge participants and how these evolved; and also the current state of the field for speaker verification and diarisation. We chart the progress in performance over the five installments of the challenge on a common evaluation dataset and provide a detailed analysis of how each year's special focus affected participants' performance. This paper is aimed both at researchers who want an overview of the speaker recognition and diarisation field, and also at challenge organisers who want to benefit from the successes and avoid the mistakes of the VoxSRC challenges. We end with a discussion of the current strengths of the field and open challenges.",
+  "This paper is aimed both at researchers who want an overview of the speaker recognition and diarisation field, and also at challenge organisers who want to benefit from the successes and avoid the mistakes of the VoxSRC challenges. We end with a discussion of the current strengths of the field and open challenges. Project page : https://mm.kaist.ac.kr/datasets/voxceleb/voxsrc/workshop.html"
 ]

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ivf.pid.pt

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:3e2c10599dd8f082ab056447dcecd255799edffaef70d198ef23426b271098b4
-size 2255832
+oid sha256:073ba2e2211a20a6f92e8d02e76a425a9dfc78b750cebb732299b9c1f12c24ab
+size 2255000

metadata.json

@@ -37,7 +37,7 @@
     "checkpoint":"colbert-ir/colbertv2.0",
     "triples":"/future/u/okhattab/root/unit/experiments/2021.10/downstream.distillation.round2.2_score/round2.nway6.cosine.ib/examples.64.json",
     "collection":[
-      "list with 4967 elements starting with...",
+      "list with 4969 elements starting with...",
       [
         "Deep neural networks have demonstrated remarkable performance in supervised learning tasks but require large amounts of labeled data. Self-supervised learning offers an alternative paradigm, enabling the model to learn from data without explicit labels. Information theory has been instrumental in understanding and optimizing deep neural networks. Specifically, the information bottleneck principle has been applied to optimize the trade-off between compression and relevant information preservation in supervised settings. However, the optimal information objective in self-supervised learning remains unclear. In this paper, we review various approaches to self-supervised learning from an information-theoretic standpoint and present a unified framework that formalizes the self-supervised information-theoretic learning problem. We integrate existing research into a coherent framework, examine recent self-supervised methods, and identify research opportunities and challenges. Moreover, we discuss empirical measurement of information-theoretic quantities and their estimators. This paper offers a comprehensive review of the intersection between information theory, self-supervised learning, and deep neural networks.",
         "Pre-trained large language models (LLMs) capture procedural knowledge about the world. Recent work has leveraged LLM's ability to generate abstract plans to simplify challenging control tasks, either by action scoring, or action modeling (fine-tuning). However, the transformer architecture inherits several constraints that make it difficult for the LLM to directly serve as the agent: e.g. limited input lengths, fine-tuning inefficiency, bias from pre-training, and incompatibility with non-text environments. To maintain compatibility with a low-level trainable actor, we propose to instead use the knowledge in LLMs to simplify the control problem, rather than solving it. We propose the Plan, Eliminate, and Track (PET) framework. The Plan module translates a task description into a list of high-level sub-tasks. The Eliminate module masks out irrelevant objects and receptacles from the observation for the current sub-task. Finally, the Track module determines whether the agent has accomplished each sub-task. On the AlfWorld instruction following benchmark, the PET framework leads to a significant 15% improvement over SOTA for generalization to human goal specifications.",
@@ -50,7 +50,7 @@
     "root":".ragatouille/",
     "experiment":"colbert",
     "index_root":null,
-    "name":"2024-09/02/05.54.22",
+    "name":"2024-09/02/07.54.42",
     "rank":0,
     "nranks":1,
     "amp":true,
@@ -59,8 +59,8 @@
   },
   "num_chunks":1,
   "num_partitions":8192,
-  "num_embeddings":850527,
-  "avg_doclen":171.2355546608,
+  "num_embeddings":850829,
+  "avg_doclen":171.2274099416,
   "RAGatouille":{
     "index_config":{
       "index_type":"PLAID",

pid_docid_map.json

@@ -4965,5 +4965,7 @@
   "4963":"2408.14608",
   "4964":"2408.14608",
   "4965":"2408.16293",
-  "4966":"2408.14572"
+  "4966":"2408.14572",
+  "4967":"2408.14886",
+  "4968":"2408.14886"
 }

plan.json

@@ -37,7 +37,7 @@
         "checkpoint": "colbert-ir\/colbertv2.0",
         "triples": "\/future\/u\/okhattab\/root\/unit\/experiments\/2021.10\/downstream.distillation.round2.2_score\/round2.nway6.cosine.ib\/examples.64.json",
         "collection": [
-            "list with 4967 elements starting with...",
+            "list with 4969 elements starting with...",
             [
                 "Deep neural networks have demonstrated remarkable performance in supervised learning tasks but require large amounts of labeled data. Self-supervised learning offers an alternative paradigm, enabling the model to learn from data without explicit labels. Information theory has been instrumental in understanding and optimizing deep neural networks. Specifically, the information bottleneck principle has been applied to optimize the trade-off between compression and relevant information preservation in supervised settings. However, the optimal information objective in self-supervised learning remains unclear. In this paper, we review various approaches to self-supervised learning from an information-theoretic standpoint and present a unified framework that formalizes the self-supervised information-theoretic learning problem. We integrate existing research into a coherent framework, examine recent self-supervised methods, and identify research opportunities and challenges. Moreover, we discuss empirical measurement of information-theoretic quantities and their estimators. This paper offers a comprehensive review of the intersection between information theory, self-supervised learning, and deep neural networks.",
                 "Pre-trained large language models (LLMs) capture procedural knowledge about the world. Recent work has leveraged LLM's ability to generate abstract plans to simplify challenging control tasks, either by action scoring, or action modeling (fine-tuning). However, the transformer architecture inherits several constraints that make it difficult for the LLM to directly serve as the agent: e.g. limited input lengths, fine-tuning inefficiency, bias from pre-training, and incompatibility with non-text environments. To maintain compatibility with a low-level trainable actor, we propose to instead use the knowledge in LLMs to simplify the control problem, rather than solving it. We propose the Plan, Eliminate, and Track (PET) framework. The Plan module translates a task description into a list of high-level sub-tasks. The Eliminate module masks out irrelevant objects and receptacles from the observation for the current sub-task. Finally, the Track module determines whether the agent has accomplished each sub-task. On the AlfWorld instruction following benchmark, the PET framework leads to a significant 15% improvement over SOTA for generalization to human goal specifications.",
@@ -50,7 +50,7 @@
         "root": ".ragatouille\/",
         "experiment": "colbert",
         "index_root": null,
-        "name": "2024-09\/02\/05.54.22",
+        "name": "2024-09\/02\/07.54.42",
         "rank": 0,
         "nranks": 1,
         "amp": true,
@@ -59,6 +59,6 @@
     },
     "num_chunks": 1,
     "num_partitions": 8192,
-    "num_embeddings_est": 850526.976486206,
-    "avg_doclen_est": 171.2355499267578
+    "num_embeddings_est": 850829.0350341797,
+    "avg_doclen_est": 171.2274169921875
 }