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"""
Copyright 2021, Dana-Farber Cancer Institute and Weill Cornell Medicine
License: GNU GPL 2.0
"""
import warnings
from pathml.ml.models.hovernet import (
HoVerNet,
_BatchNormRelu,
_ce_loss_nc_head,
_ce_loss_np_head,
_convert_multiclass_mask_to_binary,
_dice_loss_nc_head,
_dice_loss_np_head,
_get_gradient_hv,
_HoverNetDecoder,
_HoVerNetDenseUnit,
_HoVerNetEncoder,
_HoVerNetResidualUnit,
_loss_hv_grad,
_loss_hv_mse,
_make_HoVerNet_dense_block,
_make_HoVerNet_residual_block,
_post_process_single_hovernet,
_vis_outputs_single,
compute_hv_map,
extract_nuclei_info,
group_centroids_by_type,
loss_hovernet,
post_process_batch_hovernet,
remove_small_objs,
)
# Issue a deprecation warning when someone imports from this old file
warnings.warn(
"Importing from 'pathml.ml.hovernet' is deprecated and will be removed in a future version. "
"Please use 'pathml.ml.models.hovernet' instead.",
DeprecationWarning,
stacklevel=2,
)
# re-export the imported items so that the old import paths still work
__all__ = [
"_BatchNormRelu",
"_HoVerNetResidualUnit",
"_make_HoVerNet_residual_block",
"_HoVerNetEncoder",
"_HoVerNetDenseUnit",
"_make_HoVerNet_dense_block",
"_HoverNetDecoder",
"HoVerNet",
"_convert_multiclass_mask_to_binary",
"_dice_loss_np_head",
"_dice_loss_nc_head",
"_ce_loss_nc_head",
"_ce_loss_np_head",
"compute_hv_map",
"_get_gradient_hv",
"_loss_hv_grad",
"_loss_hv_mse",
"loss_hovernet",
"remove_small_objs",
"_post_process_single_hovernet",
"post_process_batch_hovernet",
"_vis_outputs_single",
"extract_nuclei_info",
"group_centroids_by_type",
]
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