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                "exec": ""
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        "categories": ["rodent imaging"]
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                "exec": ""
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                "exec": ""
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                "exec": "brainstorm3.command /opt/MCR/v98/"
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                "version": "20240320",
                "exec": ""
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                "exec": "brkraw gui"
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                "version": "20220128",
                "exec": "bash run_spm12.sh /opt/mcr/v93/"
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                "version": "20220128",
                "exec": ""
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                "version": "20230601",
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                "version": "20230601",
                "exec": ""
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                "exec": ""
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        "categories": ["phase processing"]
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                "version": "20230315",
                "exec": "code"
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            "code 230315": {
                "version": "20230315",
                "exec": ""
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        },
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                "version": "20210109",
                "exec": "conn"
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            "conn 20b": {
                "version": "20210109",
                "exec": ""
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            "connGUI-conn 22a": {
                "version": "20231115",
                "exec": "conn"
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            "conn 22a": {
                "version": "20231115",
                "exec": ""
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                "exec": ""
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                "exec": ""
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                "exec": ""
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                "exec": ""
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                "version": "20220303",
                "exec": ""
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        "categories": ["diffusion imaging"]
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                "version": "20210109",
                "exec": ""
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            "dsistudioGUI-dsistudio 2020.10": {
                "version": "20210109",
                "exec": "dsi_studio"
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                "version": "20240426",
                "exec": ""
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            "dsistudioGUI-dsistudio chen.2024.04.19": {
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                "version": "20241010",
                "exec": ""
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        "categories": ["diffusion imaging"]
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                "version": "20211026",
                "exec": ""
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                "exec": "EEGLAB"
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        "categories": ["electrophysiology"]
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                "version": "20230407",
                "exec": ""
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                "version": "20201212",
                "exec": ""
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        "categories": ["body"]
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        "apps": {
            "fastcsr 1.0": {
                "version": "20231213",
                "exec": ""
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        "categories": ["image segmentation"]
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        "apps": {
            "fieldtrip 20211114": {
                "version": "20211206",
                "exec": ""
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            "fieldtrip 20220617": {
                "version": "20220627",
                "exec": ""
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        "categories": ["electrophysiology"]
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        "apps": {
            "fmriprep 20.1.3": {
                "version": "20201118",
                "exec": ""
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            "fmriprep 20.2.6": {
                "version": "20211209",
                "exec": ""
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                "version": "20230218",
                "exec": ""
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                "version": "20230315",
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                "version": "20240402",
                "exec": ""
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            "fmriprep 24.1.0": {
                "version": "20241003",
                "exec": ""
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                "exec": ""
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                "version": "20231214",
                "exec": "freeview"
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        "categories": ["image segmentation", "structural imaging"]
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                "version": "20200905",
                "exec": ""
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                "version": "20200905",
                "exec": "fsleyes"
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                "version": "20210105",
                "exec": ""
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                "version": "20210105",
                "exec": "fsleyes"
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                "version": "20221016",
                "exec": ""
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                "version": "20230618",
                "exec": ""
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                "version": "20230618",
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                "version": "20230809",
                "exec": ""
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                "version": "20231005",
                "exec": ""
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                "version": "20231005",
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                "exec": ""
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                "version": "20240913",
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                "version": "20241018",
                "exec": ""
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                "version": "20241018",
                "exec": "fsleyes"
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        "categories": ["functional imaging", "structural imaging", "diffusion imaging", "image segmentation", "image registration"]
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                "version": "20210104",
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                "version": "20210104",
                "exec": ""
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        "categories": ["visualization"]
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    "glmsingle": {
        "apps": {
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                "version": "20240520",
                "exec": ""
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        "categories": ["functional imaging"]
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        "apps": {
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                "version": "20230620",
                "exec": "globusconnectpersonal -gui"
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            "globus 3.2.2": {
                "version": "20230620",
                "exec": ""
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        },
        "categories": ["data organisation"]
    },
    "hdbet": {
        "apps": {
            "hdbet 1.0.0": {
                "version": "20210318",
                "exec": ""
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        },
        "categories": ["image segmentation"]
    },
    "heudiconv": {
        "apps": {
            "heudiconv 1.3.1": {
                "version": "20241105",
                "exec": ""
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        "categories": ["data organisation"]
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    "hnncore": {
        "apps": {
            "hnncore 0.3": {
                "version": "20231112",
                "exec": ""
            }
        },
        "categories": ["electrophysiology"]
    },
    "hmri": {
        "apps": {
            "hmriGUI-hmri 0.6.0": {
                "version": "20230901",
                "exec": "bash run_spm12.sh /opt/mcr/R2023a fmri"
            },
            "hmri 0.6.0": {
                "version": "20230901",
                "exec": ""
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            "hmriGUI-hmri 0.6.1": {
                "version": "20231107",
                "exec": "bash run_spm12.sh /opt/mcr/R2023a fmri"
            },
            "hmri 0.6.1": {
                "version": "20231107",
                "exec": ""
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        },
        "categories": ["quantitative imaging", "structural imaging"]
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    "ilastik": {
        "apps": {
            "ilastik 1.4.0": {
                "version": "20230720",
                "exec": ""
            },
            "ilastikGUI-ilastik 1.4.0": {
                "version": "20230720",
                "exec": "run_ilastik.sh"
            }
        },
        "categories": ["image segmentation"]
    },
    "itksnap": {
        "apps": {
            "itksnapGUI-itksnap 3.8.0": {
                "version": "20201208",
                "exec": "itksnap /MRIcrop-orig.gipl"
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            "itksnap 3.8.0": {
                "version": "20201208",
                "exec": ""
            },
            "itksnapGUI-itksnap 4.0.1": {
                "version": "20230609",
                "exec": "itksnap /MRIcrop-orig.gipl"
            },
            "itksnap 4.0.1": {
                "version": "20230609",
                "exec": ""
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            "itksnapGUI-itksnap 4.0.2": {
                "version": "20240117",
                "exec": "itksnap /MRIcrop-orig.gipl"
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            "itksnap 4.0.2": {
                "version": "20240117",
                "exec": ""
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        },
        "categories": ["image segmentation","visualization"]
    },
    "julia": {
        "apps": {
            "julia 1.4.1": {
                "version": "20210105",
                "exec": ""
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            "julia 1.9.4": {
                "version": "20240405",
                "exec": ""
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            "vscodeGUI-julia 1.9.4": {
                "version": "20240405",
                "exec": "code"
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            "REPLGUI-julia 1.9.4": {
                "version": "20240405",
                "exec": "julia"
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            "julia 1.10.1": {
                "version": "20240321",
                "exec": ""
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            "vscodeGUI-julia 1.10.1": {
                "version": "20240321",
                "exec": "code"
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            "REPLGUI-julia 1.10.1": {
                "version": "20240321",
                "exec": "julia"
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        "categories": ["programming"]
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    "lashis": {
        "apps": {
            "lashis 1.0": {
                "version": "20210105",
                "exec": ""
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            "lashis 2.0": {
                "version": "20210211",
                "exec": ""
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        },
        "categories": ["hippocampus"]
    },
    "laynii": { 
        "apps": {
            "laynii 2.2.1": {
                "version": "20220701",
                "exec": ""
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        },
        "categories": ["functional imaging"]
    },
    "lcmodel": {
        "apps": {
            "lcmodel 6.3": {
                "version": "20220222",
                "exec": ""
            }
        },
        "categories": ["spectroscopy"]
    },
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        "apps": {
            "matlab 2022a": {
                "version": "20231207",
                "exec": ""
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            "matlabGUI-matlab 2022a": {
                "version": "20231207",
                "exec": "matlab"
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        },
        "categories": ["programming", "visualization"]
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    "mfcsc": {
        "apps": {
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                "version": "20230306",
                "exec": ""
            },
            "mfcsc 1.1": {
                "version": "20230321",
                "exec": ""
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        },
        "categories": ["functional imaging", "diffusion imaging"]
    },
    "mgltools": {
        "apps": {
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                "version": "20230313",
                "exec": ""
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            "pmvGUI-mgltools 1.5.7": {
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                "exec": "pmv"
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                "version": "20230313",
                "exec": "vision"
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            "adtGUI-mgltools 1.5.7": {
                "version": "20230313",
                "exec": "adt"
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        },
        "categories": ["molecular biology"]
    },
     "micapipe": {
        "apps": {
            "micapipe v0.2.3": {
                "version": "20241030",
                "exec": ""
            }
        },
        "categories": ["structural imaging", "diffusion imaging", "functional imaging", "workflows"]
    },
     "mitkdiffusion": {
        "apps": {
            "mitkdiffusion 1.2.0": {
                "version": "20230720",
                "exec": ""
            },
            "mitkdiffusionGUI-mitkdiffusion 1.2.0": {
                "version": "20230720",
                "exec": "MitkDiffusion.sh"
            }
        },
        "categories": ["diffusion imaging"]
    },
    "minc": {
        "apps": {
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                "version": "20210105",
                "exec": ""
            },
            "registerGUI-minc 1.9.17": {
                "version": "20210105",
                "exec": "register"
            },
            "minc 1.9.18": {
                "version": "20230208",
                "exec": ""
            },
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}
