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## mfcsc/toolVersion ##
Standalone (compiled) version of mfcsc with MATLAB runtime

Example:
```
mfcsc FC_SC_LIST FC_INPUT_DIR SC_INPUT_DIR OUTPUT_DIR not_in_mask_value is_contra is_keep_neg_fc is_symmetrical is_figures
```

More documentation can be found here: https://github.com/civier/mfcsc

mfcsc is released under the MIT license
mfcsc includes the Brain Connectivity Toolbox (https://sites.google.com/site/bctnet/)

Citations:
```
Civier O, Sourty M, Calamante F (2023) MFCSC: Novel method to calculate mismatch between functional and structural brain connectomes, and its application for detecting hemispheric functional specialisations. Scientific Reports. https://doi.org/10.1038/s41598-022-17213-z

Rubinov M, Sporns O (2010) Complex network measures of brain connectivity: Uses and interpretations. NeuroImage 52:1059-69.
```

To run mfcsc outside of this container, first type 'ml mfcsc/toolVersion' in the terminal and then follow the example above

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