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miappe/investigation.tsv

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+investigationId	investigationTitle	investigationDescription	submissionDate	publicReleaseDate	license	miappeVersion	associatedPublication
+	The FIP 1.0 Data Set: Highly Resolved Annotated Image Time Series of 4,000 Wheat Plots Grown in Six Years	For further details of the FIP project see https://kp.ethz.ch/infrastructure/FIP.html		26/10/2024	CC BY 4.0	1.1	https://doi.org/10.1101/2024.10.04.616624

miappe/observed_variable.tsv

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+studyId	variableId	traitName	methodName	scaleName
+FPWWGABI	canopy_cover_values	Canopy coverage	Canopy cover calculation based on FIP image and Zenkel et al. segmentation	%
+FPWWGABI	height_values	Plant height	Canopy height extraction from TLS point clouds	m
+FPWWGABI	spike_count_values	Spike number	Wheat head counts with YOLOv5	1
+FPWWGABI	senescence_values	Canopy senescence in central plot area	Visual canopy greenness scoring	1
+FPWWGABI	heading_value	End of heading	Growth stage determination based on BBCH rating by eye	deg C d
+FPWWGABI	height_final_value	Final height before lodging	QMER method based on P-splines to determine timing of key stages and quantities at defined time points	m
+FPWWGABI	protein_value	Protein content	Measurement of grain protein content using NIRs	%
+FPWWGABI	yield_value	Yield	Grain yield determination with balance and moisture correction 14 %	t ha^{-1}
+TrSpWWLP01	canopy_cover_values	Canopy coverage	Canopy cover calculation based on FIP image and Zenkel et al. segmentation	%
+FPWW028	height_values	Plant height	Canopy height extraction from TLS point clouds	m
+FPWW032	spike_count_values	Spike number	Wheat head counts with YOLOv5	1
+TrSpWWLP01	heading_value	End of heading	Growth stage determination based on BBCH rating by eye	deg C d
+FPWW028	height_final_value	Final height before lodging	QMER method based on P-splines to determine timing of key stages and quantities at defined time points	m
+FPWW032	protein_value	Protein content	Measurement of grain protein content using NIRs	%
+TrSpWWLP01	yield_value	Yield	Grain yield determination with balance and moisture correction 14 %	t ha^{-1}
+FPWW028	canopy_cover_values	Canopy coverage	Canopy cover calculation based on FIP image and Zenkel et al. segmentation	%
+FPWW032	height_values	Plant height	Canopy height extraction from TLS point clouds	m
+TrSpWWLP01	spike_count_values	Spike number	Wheat head counts with YOLOv5	1
+FPWW028	heading_value	End of heading	Growth stage determination based on BBCH rating by eye	deg C d
+FPWW032	height_final_value	Final height before lodging	QMER method based on P-splines to determine timing of key stages and quantities at defined time points	m
+TrSpWWLP01	protein_value	Protein content	Measurement of grain protein content using NIRs	%
+FPWW028	yield_value	Yield	Grain yield determination with balance and moisture correction 14 %	t ha^{-1}
+FPWW032	canopy_cover_values	Canopy coverage	Canopy cover calculation based on FIP image and Zenkel et al. segmentation	%
+TrSpWWLP01	height_values	Plant height	Canopy height extraction from TLS point clouds	m
+FPWW028	spike_count_values	Spike number	Wheat head counts with YOLOv5	1
+FPWW032	heading_value	End of heading	Growth stage determination based on BBCH rating by eye	deg C d
+TrSpWWLP01	height_final_value	Final height before lodging	QMER method based on P-splines to determine timing of key stages and quantities at defined time points	m
+FPWW028	protein_value	Protein content	Measurement of grain protein content using NIRs	%
+FPWW032	yield_value	Yield	Grain yield determination with balance and moisture correction 14 %	t ha^{-1}

miappe/person.tsv

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+studyId	personName	personEmail	personId	personRole	personAffiliation
+	Andreas Hund			PI, data collector ; author 	ETHZ
+	Achim Walter			PI, data collector ; author 	ETHZ
+	Lukas Roth			data collector ; author ; data analysis	ETHZ
+	Mike Boss			author ; data analysis	ETHZ
+	Norbert Kirchgessner			data collector  ; corresponding author	ETHZ
+	Beat Keller			data collector ; author 	ETHZ
+	Jonas Anderegg			data collector ; author 	ETHZ
+	Olivia Zumsteg			data collector ; author 	ETHZ
+	Simon Corrado			data collector ; author 	ETHZ
+	Joaquin Gajardo Castillo			author 	ETHZ
+	Simon Treier			data collector ; author 	ETHZ
+	Gregor Perich			data collector ; author 	ETHZ
+	Nicola Storni			data collector ; author 	ETHZ
+	Flavian Tschurr			data collector ; author 	ETHZ
+	Corina Oppliger			data collector ; author 	ETHZ
+	Helge Aasen			data collector ; author 	Agroscope
+	Brenda Patricia Aguirre-Cuellar			data collector ; author 	former ETHZ
+	Price Pius Atuah Akiina			data collector ; author 	former ETHZ
+	Krysztof Cybulski			data collector ; author 	former ETHZ
+	Stefan Göbel Kortstee			data collector ; author 	former ETHZ
+	Lukas Kronenberg			data collector ; author 	former ETHZ
+	Frank Liebisch			data collector ; author 	Agroscope
+	Johannes Pfeifer			data collector ; author 	former ETHZ
+	Kang Yu			data collector ; author 	TU-München
+	Hansueli Zellweger			data collector ; author 	former ETHZ
+	Xiaoran Chen			data collector ; author 	SDSC
+	Volpi  Michele			data collector ; author 	SDSC
+	Nousi  Paraskevi			data collector ; author 	SDSC

miappe/study.tsv

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+studyId	studyTitle	studyDescription	studyStartDate	studyEndDate	contactInst	locationCountry	siteName	locationLatitude	locationLongitude	locationAltitude	expeDesignDesc	expeDesignType	obsUnitLevelHierarchy	obsUnitDesc	growthFacilityDesc	growthFacilityType	culturalPractice	expeDesignMap
+FPWWGABI	GABI wheat panel	GABI-WHEAT panel	2015	2018	ETHZ	CH	FIP, Eschikon 33, 8315 Lindau	47449	8682	520	The described panels of, on average, 350 genotypes per year were replicated once, each replication was randomized and grown on a different lot in the FIP area. Each replication was augmented with checks in a 3×3 block arrangemen	Row - and column design with spatial checks		Plots of 1 x 1.5 m size	field environment condition 			
+FPWW028	GABI Restposten	Subset of GABI-WHEAT panel	2018	2019	ETHZ	CH	FIP, Eschikon 33, 8315 Lindau	47449	8682	520	The described panels of, on average, 350 genotypes per year were replicated once, each replication was randomized and grown on a different lot in the FIP area. Each replication was augmented with checks in a 3×3 block arrangemen	Row - and column design with spatial checks		Plots of 1 x 1.5 m size	field environment condition 			
+TrSpWWLP01	Wheat Delley LP01 Variety Testing	Swiss variety testing panel	2018	2019	ETHZ	CH	FIP, Eschikon 33, 8315 Lindau	47449	8682	520	Year-sites consisted of plots (experimental units in a row/range arrangement with spatial coordinates) enriched with block factors and genotypes. Three replications were used.	Row - and column design with spatial checks		Plots of 1 x 5 m size	field environment condition 			
+FPWW032	Phenoflow set (GABI, LP1, F8, etc.) 	Subset of GABI-WHEAT panel, Swiss variety testing, and Swiss breeding genotypes	2021	2022	ETHZ	CH	FIP, Eschikon 33, 8315 Lindau	47449	8682	520	The described panels of, on average, 350 genotypes per year were replicated once, each replication was randomized and grown on a different lot in the FIP area. Each replication was augmented with checks in a 3×3 block arrangemen	Row - and column design with spatial checks		Plots of 1 x 1.5 m size	field environment condition