Commit
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Parent(s):
fcf7903
add research split
Browse files- README.md +6 -3
- proteins_research.csv +3 -0
README.md
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path: "proteins_pretraining.csv"
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- split: finetuning
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path: "proteins_finetuning.csv"
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---
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# GreenBeing Proteins dataset
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In the current state of plant genomics research, about half of the finetuning split are from rice and related
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species, a fifth are from Papilionoideae/Faboideae, and seven taxa have less than 1% each.
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## Research split
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Formatted like the finetuning split, but with proteins from quinoa and amaranth.
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## Limitations and Safety Notes
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path: "proteins_pretraining.csv"
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- split: finetuning
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path: "proteins_finetuning.csv"
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- split: research
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path: "proteins_research.csv"
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---
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# GreenBeing Proteins dataset
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In the current state of plant genomics research, about half of the finetuning split are from rice and related
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species, a fifth are from Papilionoideae/Faboideae, and seven taxa have less than 1% each.
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## Research split
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Proteins from quinoa (~99%), cañihua, and the three species of amaranth which are currently grown for grain.
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Columns contain UniProt/TrEMBL gene names, species, and the amino acid sequence.
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Large proteins are split into a new row every 8,000 letters.
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## Limitations and Safety Notes
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proteins_research.csv
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version https://git-lfs.github.com/spec/v1
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oid sha256:3fa7a4a2c9607efdfeced744711b5a459970cc4aa7b04920cace98ef2680131f
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size 15755155
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