ligeti commited on
Commit
4ed3956
1 Parent(s): 825059e

Update README.md

Browse files
Files changed (1) hide show
  1. README.md +16 -8
README.md CHANGED
@@ -83,20 +83,28 @@ The dataset is structured as follows:
83
 
84
  The dataset is compiled from diverse genomic sources, with a focus on phage sequences and annotations from the RefSeq database and a dataset validated through the TemPhD method. Redundancy in sequences is addressed using the CD-HIT algorithm.
85
 
86
- ### Annotations
87
 
88
- The dataset includes annotations for each phage segment, such as the segment ID, contig ID, start and end positions, segment length, and the genomic sequence itself. The segments are labeled for phage prediction tasks.
89
- ## Additional Information
90
 
91
- ### Dataset Curators
92
 
93
- The dataset is curated by [Your Team/Institution Name].
 
94
 
 
95
 
96
- ### Citation Information
97
 
98
- ### Contact Information
99
 
100
- For any questions or feedback regarding the dataset, please contact [Balázs Ligeti].
101
 
 
 
 
 
 
 
 
 
 
 
102
 
 
83
 
84
  The dataset is compiled from diverse genomic sources, with a focus on phage sequences and annotations from the RefSeq database and a dataset validated through the TemPhD method. Redundancy in sequences is addressed using the CD-HIT algorithm.
85
 
 
86
 
87
+ ## Contact Information
 
88
 
89
+ For any questions, feedback, or contributions regarding the datasets or ProkBERT, please feel free to reach out:
90
 
91
+ - **Name**: Balázs Ligeti
92
+ - **Email**: [email protected]
93
 
94
+ We welcome your input and collaboration to improve our resources and research.
95
 
 
96
 
 
97
 
98
+ ## Citation
99
 
100
+ ```bibtex
101
+ @Article{ProkBERT2024,
102
+ author = {Ligeti, Balázs et al.},
103
+ journal = {Frontiers in Microbiology},
104
+ title = {{ProkBERT} family: genomic language models},
105
+ year = {2024},
106
+ volume = {14},
107
+ URL = {https://www.frontiersin.org/articles/10.3389/fmicb.2023.1331233},
108
+ DOI = {10.3389/fmicb.2023.1331233}
109
+ }
110