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To accompany OpenPhenom, Recursion is releasing the **RxRx3-core** dataset, a challenge dataset in phenomics optimized for the research community.
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RxRx3-core includes labeled images of 735 genetic knockouts and 1,674 small-molecule perturbations drawn from the [RxRx3 dataset](https://www.rxrx.ai/rxrx3),
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image embeddings computed with [OpenPhenom](https://huggingface.co/recursionpharma/OpenPhenom), and associations between the included small molecules and genes.
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The dataset contains 6-channel Cell Painting images and associated embeddings from 222,601 wells but is less than 18Gb, making incredibly accessible to the research community.
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Mapping the mechanisms by which drugs exert their actions is an important challenge in advancing the use of high-dimensional biological data like phenomics.
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We are excited to release the first dataset of this scale probing concentration-response along with a benchmark and model to enable the research community to
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1 |
To accompany OpenPhenom, Recursion is releasing the **RxRx3-core** dataset, a challenge dataset in phenomics optimized for the research community.
|
2 |
RxRx3-core includes labeled images of 735 genetic knockouts and 1,674 small-molecule perturbations drawn from the [RxRx3 dataset](https://www.rxrx.ai/rxrx3),
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3 |
image embeddings computed with [OpenPhenom](https://huggingface.co/recursionpharma/OpenPhenom), and associations between the included small molecules and genes.
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4 |
+
The dataset contains 6-channel Cell Painting images and associated embeddings from 222,601 wells but is less than 18Gb, making it incredibly accessible to the research community.
|
5 |
|
6 |
Mapping the mechanisms by which drugs exert their actions is an important challenge in advancing the use of high-dimensional biological data like phenomics.
|
7 |
We are excited to release the first dataset of this scale probing concentration-response along with a benchmark and model to enable the research community to
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