Update Mimic4Dataset.py
Browse files- Mimic4Dataset.py +2 -2
Mimic4Dataset.py
CHANGED
@@ -221,7 +221,7 @@ def generate_split(path,task,concat,feat_cond=True,feat_chart=True,feat_proc=Tru
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task=task.replace(" ","_")
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X_df=pd.DataFrame()
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#y_df=pd.DataFrame(df['label'],columns=['label'])
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-
for
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concat_cols=[]
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sample=data
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dyn_df,cond_df,demo=onehot(sample,task,feat_cond,feat_chart,feat_proc, feat_meds, feat_out)
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@@ -640,7 +640,7 @@ class Mimic4Dataset(datasets.GeneratorBasedBuilder):
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X_train_encoded.to_csv(self.path+"/X_train_encoded.csv", index=False)
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X_test_encoded.to_csv(self.path+"/X_test_encoded.csv", index=False)
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X_val_encoded.to_csv(self.path+"/X_val_encoded.csv", index=False)
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-
return self._info_encoded()
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else:
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return self._info_raw()
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task=task.replace(" ","_")
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X_df=pd.DataFrame()
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#y_df=pd.DataFrame(df['label'],columns=['label'])
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+
for _, data in tqdm(df.iterrows()):
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concat_cols=[]
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sample=data
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dyn_df,cond_df,demo=onehot(sample,task,feat_cond,feat_chart,feat_proc, feat_meds, feat_out)
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X_train_encoded.to_csv(self.path+"/X_train_encoded.csv", index=False)
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X_test_encoded.to_csv(self.path+"/X_test_encoded.csv", index=False)
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X_val_encoded.to_csv(self.path+"/X_val_encoded.csv", index=False)
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+
return self._info_encoded(X_train_encoded)
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else:
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return self._info_raw()
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