thbndi commited on
Commit
3a1eb7d
·
1 Parent(s): 6c2f452

Update Mimic4Dataset.py

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Files changed (1) hide show
  1. Mimic4Dataset.py +2 -2
Mimic4Dataset.py CHANGED
@@ -221,7 +221,7 @@ def generate_split(path,task,concat,feat_cond=True,feat_chart=True,feat_proc=Tru
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  task=task.replace(" ","_")
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  X_df=pd.DataFrame()
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  #y_df=pd.DataFrame(df['label'],columns=['label'])
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- for hid, data in df.iterrows():
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  concat_cols=[]
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  sample=data
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  dyn_df,cond_df,demo=onehot(sample,task,feat_cond,feat_chart,feat_proc, feat_meds, feat_out)
@@ -640,7 +640,7 @@ class Mimic4Dataset(datasets.GeneratorBasedBuilder):
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  X_train_encoded.to_csv(self.path+"/X_train_encoded.csv", index=False)
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  X_test_encoded.to_csv(self.path+"/X_test_encoded.csv", index=False)
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  X_val_encoded.to_csv(self.path+"/X_val_encoded.csv", index=False)
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- return self._info_encoded()
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  else:
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  return self._info_raw()
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  task=task.replace(" ","_")
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  X_df=pd.DataFrame()
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  #y_df=pd.DataFrame(df['label'],columns=['label'])
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+ for _, data in tqdm(df.iterrows()):
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  concat_cols=[]
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  sample=data
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  dyn_df,cond_df,demo=onehot(sample,task,feat_cond,feat_chart,feat_proc, feat_meds, feat_out)
 
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  X_train_encoded.to_csv(self.path+"/X_train_encoded.csv", index=False)
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  X_test_encoded.to_csv(self.path+"/X_test_encoded.csv", index=False)
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  X_val_encoded.to_csv(self.path+"/X_val_encoded.csv", index=False)
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+ return self._info_encoded(X_train_encoded)
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  else:
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  return self._info_raw()
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