Update Mimic4Dataset.py
Browse files- Mimic4Dataset.py +16 -3
Mimic4Dataset.py
CHANGED
@@ -23,17 +23,30 @@ class Mimic4DatasetConfig(datasets.BuilderConfig):
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def __init__(
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self,
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mimic_path,
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config_path,
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**kwargs,
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):
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super().__init__(**kwargs)
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self.mimic_path = mimic_path
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self.config_path = config_path
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class Mimic4Dataset(datasets.GeneratorBasedBuilder):
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VERSION = datasets.Version("1.0.0")
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BUILDER_CONFIGS = [
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Mimic4DatasetConfig(
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name="Phenotype",
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def __init__(
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self,
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config_path,
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**kwargs,
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):
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super().__init__(**kwargs)
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self.config_path = config_path
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class Mimic4Dataset(datasets.GeneratorBasedBuilder):
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VERSION = datasets.Version("1.0.0")
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def __init__(self, **kwargs):
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self.mimic_path = kwargs.pop("mimic_path", None)
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#check if config_path in kwargs to get it
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if "config_path" in kwargs:
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self.config_path = kwargs.pop("config_path")
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else:
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#get the default config_path
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self.config_path = self.BUILDER_CONFIGS[self.builder_config.name].config_path
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if self.mimic_path is None:
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raise ValueError("You must specify the path of the mimic4 data")
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if not os.path.exists(self.mimic_path):
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raise ValueError("The path of the mimic4 data does not exist")
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super().__init__(**kwargs)
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BUILDER_CONFIGS = [
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Mimic4DatasetConfig(
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name="Phenotype",
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