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{
"cells": [
{
"cell_type": "code",
"execution_count": 5,
"id": "e3fbdac5-cd38-4e41-b5d2-d9d112b4ac1b",
"metadata": {
"scrolled": true
},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"Looking in indexes: http://mirrors.aliyun.com/pypi/simple\n",
"Requirement already satisfied: transformers in /root/miniconda3/lib/python3.12/site-packages (4.47.1)\n",
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"Collecting datasets\n",
" Downloading http://mirrors.aliyun.com/pypi/packages/d7/84/0df6c5981f5fc722381662ff8cfbdf8aad64bec875f75d80b55bfef394ce/datasets-3.2.0-py3-none-any.whl (480 kB)\n",
"\u001b[2K \u001b[90mโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโ\u001b[0m \u001b[32m480.6/480.6 kB\u001b[0m \u001b[31m4.1 MB/s\u001b[0m eta \u001b[36m0:00:00\u001b[0m00:01\u001b[0m00:01\u001b[0m\n",
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"Collecting pyarrow>=15.0.0 (from datasets)\n",
" Downloading http://mirrors.aliyun.com/pypi/packages/3a/2e/3b99f8a3d9e0ccae0e961978a0d0089b25fb46ebbcfb5ebae3cca179a5b3/pyarrow-18.1.0-cp312-cp312-manylinux_2_28_x86_64.whl (40.1 MB)\n",
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"\u001b[?25hCollecting dill<0.3.9,>=0.3.0 (from datasets)\n",
" Downloading http://mirrors.aliyun.com/pypi/packages/c9/7a/cef76fd8438a42f96db64ddaa85280485a9c395e7df3db8158cfec1eee34/dill-0.3.8-py3-none-any.whl (116 kB)\n",
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" Downloading http://mirrors.aliyun.com/pypi/packages/f9/9b/335f9764261e915ed497fcdeb11df5dfd6f7bf257d4a6a2a686d80da4d54/requests-2.32.3-py3-none-any.whl (64 kB)\n",
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"\u001b[?25hCollecting tqdm>=4.27 (from transformers)\n",
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"\u001b[?25hCollecting xxhash (from datasets)\n",
" Downloading http://mirrors.aliyun.com/pypi/packages/11/a7/81dba5010f7e733de88af9555725146fc133be97ce36533867f4c7e75066/xxhash-3.5.0-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (194 kB)\n",
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" Downloading http://mirrors.aliyun.com/pypi/packages/b9/74/fbb6559de3607b3300b9be3cc64e97548d55678e44623db17820dbd20002/aiohappyeyeballs-2.4.4-py3-none-any.whl (14 kB)\n",
"Collecting aiosignal>=1.1.2 (from aiohttp->datasets)\n",
" Downloading http://mirrors.aliyun.com/pypi/packages/ec/6a/bc7e17a3e87a2985d3e8f4da4cd0f481060eb78fb08596c42be62c90a4d9/aiosignal-1.3.2-py2.py3-none-any.whl (7.6 kB)\n",
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" Downloading http://mirrors.aliyun.com/pypi/packages/af/f2/64b73a9bb86f5a89fb55450e97cd5c1f84a862d4ff90d9fd1a73ab0f64a5/frozenlist-1.5.0-cp312-cp312-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (283 kB)\n",
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"Requirement already satisfied: MarkupSafe>=2.0 in /root/miniconda3/lib/python3.12/site-packages (from jinja2->torch->deepspeed) (2.1.5)\n",
"Requirement already satisfied: mpmath<1.4.0,>=1.1.0 in /root/miniconda3/lib/python3.12/site-packages (from sympy->torch->deepspeed) (1.3.0)\n",
"Installing collected packages: pytz, xxhash, tzdata, tqdm, requests, pyarrow, propcache, multidict, frozenlist, dill, aiohappyeyeballs, yarl, pandas, multiprocess, aiosignal, aiohttp, datasets\n",
" Attempting uninstall: tqdm\n",
" Found existing installation: tqdm 4.66.2\n",
" Uninstalling tqdm-4.66.2:\n",
" Successfully uninstalled tqdm-4.66.2\n",
" Attempting uninstall: requests\n",
" Found existing installation: requests 2.31.0\n",
" Uninstalling requests-2.31.0:\n",
" Successfully uninstalled requests-2.31.0\n",
"Successfully installed aiohappyeyeballs-2.4.4 aiohttp-3.11.11 aiosignal-1.3.2 datasets-3.2.0 dill-0.3.8 frozenlist-1.5.0 multidict-6.1.0 multiprocess-0.70.16 pandas-2.2.3 propcache-0.2.1 pyarrow-18.1.0 pytz-2024.2 requests-2.32.3 tqdm-4.67.1 tzdata-2024.2 xxhash-3.5.0 yarl-1.18.3\n",
"\u001b[33mWARNING: Running pip as the 'root' user can result in broken permissions and conflicting behaviour with the system package manager. It is recommended to use a virtual environment instead: https://pip.pypa.io/warnings/venv\u001b[0m\u001b[33m\n",
"\u001b[0m"
]
}
],
"source": [
"!pip install transformers sentencepiece google protobuf deepspeed peft datasets "
]
},
{
"cell_type": "code",
"execution_count": 9,
"id": "4e906370-40c7-4f6b-a700-f183a9308c78",
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"https://hf-mirror.com\n"
]
}
],
"source": [
"import os\n",
"\n",
"# ่ฎพ็ฝฎ็ฏๅขๅ้, autodlไธๅบ ๅ
ถไปidc\n",
"os.environ['HF_ENDPOINT'] = 'https://hf-mirror.com'\n",
"\n",
"# ๆๅฐ็ฏๅขๅ้ไปฅ็กฎ่ฎค่ฎพ็ฝฎๆๅ\n",
"print(os.environ.get('HF_ENDPOINT'))"
]
},
{
"cell_type": "code",
"execution_count": 1,
"id": "ecc98529-6581-41d2-a876-23ce5187cae7",
"metadata": {},
"outputs": [],
"source": [
"import subprocess\n",
"import os\n",
"# ่ฎพ็ฝฎ็ฏๅขๅ้, autodlไธ่ฌๅบๅ\n",
"result = subprocess.run('bash -c \"source /etc/network_turbo && env | grep proxy\"', shell=True, capture_output=True, text=True)\n",
"output = result.stdout\n",
"for line in output.splitlines():\n",
" if '=' in line:\n",
" var, value = line.split('=', 1)\n",
" os.environ[var] = value"
]
},
{
"cell_type": "code",
"execution_count": 2,
"id": "b01fc372-33af-46e5-8c0e-8bccba7237ee",
"metadata": {},
"outputs": [],
"source": [
"from datasets import load_dataset\n",
"# load ~11k samples from promoters prediction dataset\n",
"dataset = load_dataset(\"dnagpt/dna_core_promoter\")['train'].train_test_split(test_size=0.1)"
]
},
{
"cell_type": "code",
"execution_count": 3,
"id": "136c38d4-bd0f-4ecd-9165-2fd5b5207c1d",
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"DatasetDict({\n",
" train: Dataset({\n",
" features: ['sequence', 'label'],\n",
" num_rows: 53276\n",
" })\n",
" test: Dataset({\n",
" features: ['sequence', 'label'],\n",
" num_rows: 5920\n",
" })\n",
"})"
]
},
"execution_count": 3,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"dataset"
]
},
{
"cell_type": "markdown",
"id": "28acb64e-8d1e-4482-a515-344a2e0344c4",
"metadata": {},
"source": [
"## lfs ๆฏๆ\n",
"apt-get update\n",
"\n",
"apt-get install git-lfs\n",
"\n",
"git lfs install"
]
},
{
"cell_type": "code",
"execution_count": null,
"id": "3d3cefb0-1eed-4f23-8591-1990f7113820",
"metadata": {},
"outputs": [],
"source": []
}
],
"metadata": {
"kernelspec": {
"display_name": "Python 3 (ipykernel)",
"language": "python",
"name": "python3"
},
"language_info": {
"codemirror_mode": {
"name": "ipython",
"version": 3
},
"file_extension": ".py",
"mimetype": "text/x-python",
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.12.3"
}
},
"nbformat": 4,
"nbformat_minor": 5
}
|