Upload processor

image_preprocessing_molmo.py

@@ -0,0 +1,546 @@
+"""Image processor class for Molmo"""
+from typing import List, Optional, Union, Mapping
+
+import numpy as np
+import einops
+import torch
+import torchvision.transforms
+from torchvision.transforms import InterpolationMode
+from torchvision.transforms.functional import convert_image_dtype
+
+from transformers.image_utils import (
+    OPENAI_CLIP_MEAN,
+    OPENAI_CLIP_STD,
+    ImageInput,
+    is_valid_image,
+)
+from transformers.processing_utils import ImagesKwargs
+from transformers.image_processing_utils import BaseImageProcessor
+from transformers.utils import logging
+
+
+logger = logging.get_logger(__name__)
+
+
+def pad_to_bounding_box(
+    image, offset_height, offset_width, target_height,
+    target_width, value=0
+):
+    height, width = image.shape[:2]
+    after_padding_width = target_width - offset_width - width
+    after_padding_height = target_height - offset_height - height
+    return np.pad(image, [
+        [offset_height, after_padding_height],
+        [offset_width, after_padding_width],
+        [0, 0]
+    ], constant_values=value)
+
+
+def normalize_image(image, offset, scale):
+    image -= np.array(offset, dtype=np.float32)[None, None, :]
+    image /= np.array(scale, dtype=np.float32)[None, None, :]
+    return image
+
+
+def resize_and_pad(
+    image,
+    desired_output_size,
+    resize_method="torch-bilinear",
+    pad_value=0,
+    normalize=True,
+    image_mean=OPENAI_CLIP_MEAN,
+    image_std=OPENAI_CLIP_STD,
+):
+    desired_height, desired_width = desired_output_size
+    height, width = image.shape[:2]
+
+    # Cast into float32 since the training code did this in float32 and it (very rarely) effects
+    # the results after rounding.
+    image_scale_y = np.array(desired_height, np.float32) / np.array(height, np.float32)
+    image_scale_x = np.array(desired_width, np.float32) / np.array(width, np.float32)
+    image_scale = min(image_scale_x, image_scale_y)
+    scaled_height = int(np.array(height, np.float32) * image_scale)
+    scaled_width = int(np.array(width, np.float32) * image_scale)
+
+    if resize_method == "tensorflow":
+        # This how the original training code did resizing, it can produce slightly different
+        # results then using torch resize so we keep it just in case
+        import tensorflow as tf
+        image = tf.image.convert_image_dtype(tf.constant(image), dtype=tf.float32)
+        image = tf.image.resize(
+            image,
+            [scaled_height, scaled_width],
+            method=tf.image.ResizeMethod.BILINEAR,
+            antialias=True,
+        )
+        image = tf.clip_by_value(image, 0.0, 1.0)
+        image = image.numpy()
+    elif resize_method == "torch-bilinear":
+        image = torch.permute(torch.from_numpy(image), [2, 0, 1])
+        image = convert_image_dtype(image)  # resize in float32 to match the training code
+        image = torchvision.transforms.Resize(
+            [scaled_height, scaled_width], InterpolationMode.BILINEAR, antialias=True
+        )(image)
+        image = torch.clip(image, 0.0, 1.0)
+        image = torch.permute(image, [1, 2, 0]).numpy()
+    else:
+        raise NotImplementedError(resize_method)
+
+    top_pad = (desired_height - scaled_height) // 2
+    left_pad = (desired_width - scaled_width) // 2
+    padding = [
+        [top_pad, desired_height - scaled_height - top_pad],
+        [left_pad, desired_width - scaled_width - left_pad],
+        [0, 0]
+    ]
+    image_mask = np.pad(np.ones_like(image[:, :, 0], dtype=bool), padding[:2])
+    image = np.pad(image, padding, constant_values=pad_value)
+    if normalize:
+        image = normalize_image(image, offset=image_mean, scale=image_std)
+    return image, image_mask
+
+
+def select_tiling(h, w, patch_size, max_num_patches):
+    """Decide how best to divide in image of size [w, h] in up to max_num_patches of size patch_size"""
+    original_size = np.stack([h, w])  # [1, 2]
+    original_res = h * w
+    tilings = []
+    for i in range(1, max_num_patches+1):
+        for j in range(1, max_num_patches+1):
+            if i*j <= max_num_patches:
+                tilings.append((i, j))
+    # sort so argmin and argmax favour smaller tilings in the event of a tie
+    tilings.sort(key=lambda x: (x[0]*x[1], x[0]))
+    candidate_tilings = np.array(tilings, dtype=np.int32)  # [n_resolutions, 2]
+    candidate_resolutions = candidate_tilings * patch_size  # [n_resolutions, 2]
+
+    # How much we would need to scale the image to fit exactly in each tiling
+    original_size = np.stack([h, w], dtype=np.float32)  # [1, 2]
+    required_scale_d = candidate_resolutions.astype(np.float32) / original_size
+    required_scale = np.min(required_scale_d, axis=-1, keepdims=True)  # [n_resolutions, 1]
+    if np.all(required_scale < 1):
+        # We are forced to downscale, so try to minimize the amount of downscaling
+        ix = np.argmax(required_scale)
+    else:
+        # Pick the resolution that required the least upscaling so that it most closely fits the image
+        required_scale = np.where(required_scale < 1.0, 10e9, required_scale)
+        ix = np.argmin(required_scale)
+    return candidate_tilings[ix]
+
+
+class MolmoImagesKwargs(ImagesKwargs, total=False):
+    max_crops: Optional[int]
+    overlap_margins: Optional[List[int]]
+    base_image_input_size: Optional[List[int]]
+    image_token_length_w: Optional[int]
+    image_token_length_h: Optional[int]
+    image_patch_size: Optional[int]
+    image_padding_mask: Optional[bool]
+
+
+class MolmoImageProcessor(BaseImageProcessor):
+    """Preprocess images and multi-model inputs"""
+
+    def __init__(
+        self,
+        max_crops: int = 12,
+        overlap_margins: List[int] = (4, 4),
+        base_image_input_size: List[int] = (336, 336),
+        image_token_length_w: int = 12,
+        image_token_length_h: int = 12,
+        image_patch_size: int = 14,
+        image_padding_mask: bool = True,
+        do_normalize: bool = True,
+        image_mean: Optional[Union[float, List[float]]] = None,
+        image_std: Optional[Union[float, List[float]]] = None,
+        **kwargs,
+    ):
+        super().__init__(**kwargs)
+        self.max_crops = max_crops
+        self.overlap_margins = overlap_margins
+        self.base_image_input_size = base_image_input_size
+        self.image_token_length_w = image_token_length_w
+        self.image_token_length_h = image_token_length_h
+        self.image_patch_size = image_patch_size
+        self.image_padding_mask = image_padding_mask
+        self.do_normalize = do_normalize
+        self.image_mean = image_mean if image_mean is not None else OPENAI_CLIP_MEAN
+        self.image_std = image_std if image_std is not None else OPENAI_CLIP_STD
+
+    def image_to_patches_and_tokens(
+        self,
+        image: ImageInput,
+        image_patch_token_id: int,
+        image_col_token_id: int,
+        image_start_token_id: int,
+        image_end_token_id: int,
+        max_crops: Optional[int] = None,
+        overlap_margins: Optional[List[int]] = None,
+        base_image_input_size: Optional[Union[int, List[int]]] = None,
+        image_token_length_w: Optional[int] = None,
+        image_token_length_h: Optional[int] = None,
+        image_patch_size: Optional[int] = None,
+    ):
+        if isinstance(base_image_input_size, int):
+            base_image_input_size = (base_image_input_size, base_image_input_size)
+
+        base_image_input_d = image_patch_size
+        tokens_per_image = image_token_length_w * image_token_length_h
+        image_base_patch_w = base_image_input_size[1] // base_image_input_d
+        image_base_patch_h = base_image_input_size[0] // base_image_input_d
+
+        original_image_h, original_image_w = image.shape[:2]
+        crop_size = base_image_input_size[0]
+
+        # Discard this many patches from the (left/top, right/bottom) of crops
+        left_margin, right_margin = overlap_margins
+        # left_margin, right_margin = 2, 2
+        assert left_margin % 2 == 0  # Required for compatibility with 2x2 pooling
+        total_margin_pixels = base_image_input_d*(right_margin + left_margin)  # pixels removed per dim
+        crop_patches = base_image_input_size[0] // base_image_input_d  # patches per crop dim
+        crop_window_patches = crop_patches - (right_margin + left_margin)  # usable patches
+        crop_window_size = crop_window_patches * base_image_input_d
+        tiling = select_tiling(
+            original_image_h - total_margin_pixels,
+            original_image_w - total_margin_pixels,
+            crop_window_size,
+            max_crops
+        )
+        src, img_mask = resize_and_pad(
+            image,
+            [tiling[0]*crop_window_size+total_margin_pixels, tiling[1]*crop_window_size+total_margin_pixels]
+        )
+
+        # Now we have to split the image into crops, while keeping track of how each patch in the
+        # each crop should be ordered in the global image, this require a lot of tricky booking
+        n_crops = tiling[0] * tiling[1]
+        patches_arr = []
+        mask_arr = []
+        patch_ordering_arr = []
+
+        # We assume 2x2 pooling, but can allow padding the right/bottom with extra
+        # patches if the number of patches per side is not even
+        assert (crop_patches+1)//2 == image_token_length_h
+        assert (crop_patches+1)//2 == image_token_length_w
+        on = 0
+        on_patch = 0
+        for i in range(tiling[0]):
+            y0 = i*crop_window_size
+            if i == 0:
+                crop_y0 = 0
+            else:
+                crop_y0 = left_margin // 2
+
+            crop_h = image_base_patch_h - (right_margin + left_margin)
+            if i == 0:
+                crop_h += left_margin
+            if i == (tiling[0]-1):
+                crop_h += right_margin
+            for j in range(tiling[1]):
+                x0 = j*crop_window_size
+                if j == 0:
+                    crop_x0 = 0
+                else:
+                    crop_x0 = left_margin // 2
+
+                crop_w = image_base_patch_w - (right_margin + left_margin)
+                if j == 0:
+                    crop_w += left_margin
+                if j == (tiling[1]-1):
+                    crop_w += right_margin
+
+                pooled_w = (crop_w + 1) // 2
+                pooled_h = (crop_h + 1) // 2
+                patch_ordering_arr.append(
+                    pad_to_bounding_box(
+                        np.reshape(np.arange(on, on+pooled_h*pooled_w, dtype=np.int32), (pooled_h, pooled_w, 1)),
+                        crop_y0, crop_x0, image_token_length_h, image_token_length_w, value=-1
+                    )[:, :, 0]
+                )
+                patches_arr.append(src[y0:y0+crop_size, x0:x0+crop_size])
+                mask_arr.append(img_mask[y0:y0+crop_size, x0:x0+crop_size])
+
+                on += pooled_h*pooled_w
+                on_patch += 1
+        patches = np.stack(patches_arr)
+        patch_ordering = np.stack(patch_ordering_arr)
+        img_mask = np.stack(mask_arr)
+
+        # Switch to [n_crops, n_patches, pixels_per_patch] format
+        image_layout_impatch_w, image_layout_impatch_h = tiling[0], tiling[1]
+        patches = einops.rearrange(
+            patches, 'p (h dh) (w dw) c -> p (h w) (dh dw c)',
+            dh=base_image_input_d,
+            dw=base_image_input_d,
+            h=image_base_patch_h,
+            w=image_base_patch_w
+        )
+        img_mask = einops.rearrange(
+            img_mask, 'p (h dh) (w dw) -> p (h w) (dh dw)',
+            dh=base_image_input_d,
+            dw=base_image_input_d,
+            h=image_base_patch_h,
+            w=image_base_patch_w
+        )
+
+        img_mask = img_mask.astype(np.float32).mean(axis=-1)
+        patch_ordering = np.reshape(patch_ordering, [-1])
+        valid = patch_ordering >= 0
+
+        # Transpose order, to get left-to-right order instead of crop-by-crop order
+        patch_ordering_rh = np.reshape(
+            patch_ordering,
+            [tiling[0], tiling[1], image_token_length_h, image_token_length_w]
+        )
+        patch_ordering_rh = np.transpose(patch_ordering_rh, [0, 2, 1, 3])
+        patch_ordering_rh = np.reshape(patch_ordering_rh, [-1])
+
+        # The transpose will screw up which patches are masked, project the
+        # new order into sparse structure of `patch_ordering` to fix this
+        patch_ordering[valid] = patch_ordering_rh[patch_ordering_rh >= 0]
+
+        # Now build the output tokens
+        h = tiling[0] * crop_window_patches + (right_margin+left_margin)
+        w = tiling[1] * crop_window_patches + (right_margin+left_margin)
+        per_row = np.full(
+            ((w+1)//2,),
+            image_patch_token_id,
+        )
+        per_row = np.concatenate([per_row, [image_col_token_id]], 0)
+
+        joint = np.tile(per_row, [(h+1)//2])
+        joint = [
+            [image_start_token_id],
+            joint,
+            [image_end_token_id]
+        ]
+
+        # Finally do the same for the global image
+        resized, _ = resize_and_pad(image, base_image_input_size)
+        resized = einops.rearrange(
+            resized, '(h dh) (w dw) c -> (h w) (dh dw c)',
+            dh=base_image_input_d,
+            dw=base_image_input_d,
+            h=image_base_patch_h,
+            w=image_base_patch_w
+        )
+        patches = np.concatenate([np.expand_dims(resized, 0), patches], 0)
+
+        # Global image goes first, so the order of patches in previous crops gets increased
+        patch_ordering = np.where(
+            patch_ordering >= 0,
+            patch_ordering + tokens_per_image,
+            -1
+        )
+        patch_ordering = np.concatenate([np.arange(0, tokens_per_image), patch_ordering], 0)
+        per_row = np.full(
+            (image_token_length_w,),
+            image_patch_token_id,
+        )
+        per_row = np.concatenate([per_row, [image_col_token_id]], 0)
+        extra_tokens = np.tile(per_row, [image_token_length_h])
+        joint = [
+                    [image_start_token_id],
+                    extra_tokens,
+                    [image_end_token_id],
+                ] + joint
+
+        joint = np.concatenate(joint, 0)
+        img_mask = np.pad(img_mask, [[0, 1], [0, 0]], constant_values=-1)
+        return patches, joint, patch_ordering, img_mask
+
+    def build_image_input_idx(
+        self,
+        image_tokens: np.ndarray,
+        patch_order: np.ndarray,
+        image_patch_token_id: int,
+        no_image: Optional[bool] = None,
+        image_token_length_w: Optional[int] = None,
+        image_token_length_h: Optional[int] = None,
+    ):
+        """Converts `patch_order` into a mapping of token_id -> patch_id"""
+
+        tokens_per_image = image_token_length_w * image_token_length_h
+        if no_image is not None and no_image:
+            return np.zeros((0, tokens_per_image), np.int32)
+
+        # Indices to insert the patches
+        image_input_idx = image_tokens == image_patch_token_id
+        image_input_idx = np.nonzero(image_input_idx)[0].astype(np.int32)
+
+        if patch_order is not None:
+            n_tokens = image_input_idx.shape[0]
+            patch_order = np.reshape(patch_order, [-1])
+            n_patches = patch_order.shape[0]
+
+            valid = patch_order >= 0
+            n_valid_patches = valid.sum()
+            assert len(image_input_idx) == n_valid_patches
+
+            sorted_patch_ixs = np.zeros([n_tokens], np.int32)
+            sorted_patch_ixs[patch_order[valid]] = np.arange(n_valid_patches, dtype=np.int32)
+
+            # Project the inverted mapping into same sparse structure
+            sorted_patch_ixs_ex = np.full(np.shape(patch_order), -1)
+            sorted_patch_ixs_ex[valid] = sorted_patch_ixs
+
+            # Do the gather and then re-masked outputs that were masked in `sorted_patch_ixs`
+            valid = (sorted_patch_ixs_ex >= 0).astype(np.int32)
+            image_input_idx = image_input_idx[sorted_patch_ixs_ex*valid]
+            image_input_idx = image_input_idx*valid - 100*(1 - valid)
+            image_input_idx = np.reshape(image_input_idx, [-1, tokens_per_image])
+        return image_input_idx
+
+    def preprocess(
+        self,
+        image: np.ndarray,
+        image_patch_token_id: int,
+        image_col_token_id: int,
+        image_start_token_id: int,
+        image_end_token_id: int,
+        max_crops: Optional[int] = None,
+        overlap_margins: Optional[List[int]] = None,
+        base_image_input_size: Optional[Union[int, List[int]]] = None,
+        image_token_length_w: Optional[int] = None,
+        image_token_length_h: Optional[int] = None,
+        image_patch_size: Optional[int] = None,
+        **kwargs,
+    ):
+        """Preprocesses an image
+
+        Returns:
+            crops: (n_crops, n_patches, patch_dim) individual crops, `n_crops` might
+                   change between images but the other dimension are fixed
+            tokens: (n_tokens,) int32 tokens, pad tokens indicate where to insert the
+                                patch features, might include other special tokens as well
+            image_idx: (n_crops, n_patches) index in `tokens` to put the patch features from the
+                       crops after pooling, negative values indicates patches features to exclude
+            padding_mask: (n_crops, n_patches) what percent of each crop is padding, can be None
+                          if the image mask is not being used.
+        """
+
+        max_crops = max_crops or self.max_crops
+        overlap_margins = overlap_margins or self.overlap_margins
+        base_image_input_size = base_image_input_size or self.base_image_input_size
+        image_token_length_w = image_token_length_w or self.image_token_length_w
+        image_token_length_h = image_token_length_h or self.image_token_length_h
+        image_patch_size = image_patch_size or self.image_patch_size
+
+        crops, image_tokens, patch_ordering, img_mask = self.image_to_patches_and_tokens(
+            image,
+            image_patch_token_id,
+            image_col_token_id,
+            image_start_token_id,
+            image_end_token_id,
+            max_crops,
+            overlap_margins,
+            base_image_input_size,
+            image_token_length_w,
+            image_token_length_h,
+            image_patch_size,
+        )
+        patch_idx = self.build_image_input_idx(
+            image_tokens,
+            patch_ordering,
+            image_patch_token_id,
+            image_token_length_w=image_token_length_w,
+            image_token_length_h=image_token_length_h,
+        )
+        return crops, image_tokens, patch_idx, img_mask
+
+    def multimodal_preprocess(
+        self,
+        images: np.ndarray,
+        tokens: List[int],
+        image_idx: np.ndarray,
+        sequence_length: int,
+        image_patch_token_id: int,
+        image_col_token_id: int,
+        image_start_token_id: int,
+        image_end_token_id: int,
+        **kwargs,
+    ):
+        """Merge images and text tokens into multi-modal features for the model
+
+        :param images: images to use as input
+        :param tokens: input text tokens
+        :param image_idx: where to insert the images into `tokens`
+        :params image_patch_token_id: id to use of tokens that will contain image features
+        :params image_col_token_id: token id for image column special tokens
+        :params image_start_token_id: token id for image start special tokens
+        :params image_end_token_id: token id for image end special tokens
+        :params kwargs: override preprocessor default args
+        """
+        max_total_crops = kwargs.get("max_crops") or self.max_crops
+        image_token_length_w = kwargs.get("image_token_length_w") or self.image_token_length_w
+        image_token_length_h = kwargs.get("image_token_length_h") or self.image_token_length_h
+        image_patch_size = kwargs.get("image_patch_size") or self.image_patch_size
+        base_image_input_size = kwargs.get("base_image_input_size") or self.base_image_input_size
+        image_num_patch = (
+            base_image_input_size[0] // image_patch_size,
+            base_image_input_size[1] // image_patch_size,
+        )
+        image_padding_mask = kwargs.get("image_padding_mask") or self.image_padding_mask
+
+        tokens_per_image = image_token_length_w * image_token_length_h
+        n_pixels = image_patch_size * image_patch_size * 3
+        n_patches = image_num_patch[0] * image_num_patch[1]
+
+        if images is None:
+            return {
+                "input_ids": tokens,
+            }
+        else:
+            n = len(images)
+            all_crops = []
+            all_image_idx = []
+            out_tokens = []
+            all_crop_masks = []
+
+            for ix in range(n):
+                token_ix = image_idx[ix]
+                crops, image_tokens, patch_idx, img_mask = self.preprocess(
+                    images[ix],
+                    image_patch_token_id,
+                    image_col_token_id,
+                    image_start_token_id,
+                    image_end_token_id,
+                    **kwargs,
+                )
+
+                if token_ix == -1:  # -1 is an image inserted at the very start
+                    start = 0
+                    token_ix = 0
+                    end = 0
+                else:
+                    start = 0 if ix == 0 else image_idx[ix-1] + 1
+                    end = token_ix + 1
+
+                all_image_idx.append(patch_idx + token_ix)
+                all_crops.append(crops)
+                out_tokens.append(tokens[start:token_ix])
+                out_tokens.append(image_tokens)
+                if ix == (n - 1):
+                    out_tokens.append(tokens[end:])
+                if image_padding_mask:
+                    all_crop_masks.append(img_mask)
+
+            input_ids = np.concatenate(out_tokens, 0)
+            images = np.concatenate(all_crops, 0)
+            image_input_idx = np.concatenate(all_image_idx, 0)
+            if image_padding_mask:
+                image_masks = np.concatenate(all_crop_masks, 0)
+            else:
+                image_masks = None
+
+        out = {
+            "input_ids": input_ids,
+            "images": images,
+            "image_input_idx": image_input_idx
+        }
+        if image_masks is not None:
+            out["image_masks"] = image_masks
+        return out
+
+
+MolmoImageProcessor.register_for_auto_class()

preprocessor_config.json

@@ -0,0 +1,32 @@
+{
+  "auto_map": {
+    "AutoImageProcessor": "image_preprocessing_molmo.MolmoImageProcessor",
+    "AutoProcessor": "allenai/Molmo-7B-D-0924--preprocessing_molmo.MolmoProcessor"
+  },
+  "base_image_input_size": [
+    336,
+    336
+  ],
+  "do_normalize": true,
+  "image_mean": [
+    0.48145466,
+    0.4578275,
+    0.40821073
+  ],
+  "image_padding_mask": true,
+  "image_patch_size": 14,
+  "image_processor_type": "MolmoImageProcessor",
+  "image_std": [
+    0.26862954,
+    0.26130258,
+    0.27577711
+  ],
+  "image_token_length_h": 12,
+  "image_token_length_w": 12,
+  "max_crops": 12,
+  "overlap_margins": [
+    4,
+    4
+  ],
+  "processor_class": "MolmoProcessor"
+}