| source('parse.input.table/dnv.table.to.uniprot.R') | |
| # Define the directory containing the CSV files | |
| args <- commandArgs(trailingOnly = T) | |
| input <- args[1] | |
| output <- args[2] | |
| dnv.table <- read.csv(input, row.names = 1) | |
| dnv.table$VarID <- paste0(dnv.table$uniprotID, ":", dnv.table$aaChg) | |
| uniprot.table <- dnv.table.to.uniprot.by.af2.uniprotID.parallel(dnv.table, 'VarID', 'score', 'uniprotID', 'aaChg') | |
| write.csv(uniprot.table$result.noNA, output) |