diff --git "a/smi-ted/finetune/moleculenet/biodegradability/biodegradability.csv" "b/smi-ted/finetune/moleculenet/biodegradability/biodegradability.csv" new file mode 100644--- /dev/null +++ "b/smi-ted/finetune/moleculenet/biodegradability/biodegradability.csv" @@ -0,0 +1,3193 @@ +Unnamed: 0,BCUTi-1h,BCUTp-1h,SpDiam_A,BCUTs-1h,BCUTd-1h,smiles,Class +2894,0.3851927319764474,0.0250531615746631,0.7495007734254199,0.844239503588526,0.7204975833228596,OCC1COC(=O)O1,1 +861,0.5607835405444384,0.0523559637295008,0.8646660371686108,0.9946949334103684,0.7584755488894903,CC1CC(=O)N=NC1c1cc(c(cc1)NC(=O)c1ccc(cc1)OC)[N+]([O-])=O,1 +3017,0.529034905212638,0.0576717662129199,0.8618996545746078,0.8442393440712836,0.7605246501707911,Oc1cc2ccccc2cc1C(=O)Nc1ccccc1,0 +2052,0.3822950738396602,0.0559102126664037,0.8697206206787317,0.3151984259931997,0.7655132410047591,Cc1cc(cc(C)c1OCC1CO1)-c1cc(C)c(OCC2CO2)c(C)c1,0 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+659,0.3858259544804574,0.2078837067598735,0.8385401205462993,0.8452670783174379,0.955603463533182,CC(CC(C)C)OC(=O)CC(C(=O)OC(C)CC(C)C)S(O)(=O)=O,1 +147,0.9942791674899856,0.2089244092077424,0.904090948817803,0.994694121078488,0.9566905349721876,C=CS(=O)(=O)CCOCCNc1[n]c(F)[n]c(Nc2cc(NC(N)=O)c(cc2)/N=N/c2cc3c(cc(cc3cc2S(O)(=O)=O)S(O)(=O)=O)S(O)(=O)=O)[n]1,0 +567,0.5286359236150715,0.0510892660881688,0.8204278263411902,0.3895379782286956,0.7568162201389541,CC(C)CC(C)c1ccccc1N,0 +2186,0.5316482867114494,0.0518918835114015,0.8211267713757561,0.5421611721585531,0.751870125421313,Cc1ccccc1NC(=N)Nc1ccccc1C,0 +990,0.3842339796342471,0.0287070279467053,0.6797461866305622,0.8442421290507303,0.7179508187642851,CCCC(O)=O,1 +2172,0.3811208319066232,0.0523274580465173,0.8493476084883399,0.6919973148894855,0.9507397114620748,Cc1cccc(c1O)C(C)(C)C,0 +887,0.3817107317451111,0.0264283675367463,0.6524176406141577,0.3145628193829677,0.7156275610038124,CC1CO1,1 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+415,0.5607787477394801,0.0536202036777206,0.8793733355602945,0.9946946354159584,0.9511123322204348,CC(C)(C)c1cc(cc(/N=N/c2ccccc2[N+]([O-])=O)c1O)C(C)(C)C,0 +1174,0.3832945210906375,0.0375689028055146,0.7355021794383695,0.8442394712261274,0.7188459762315713,CCCCCCCCCCCCCCCCCC(=O)CCCCCCCCCCCCCCCCC,0 +2890,0.3812913615962476,0.0360186996984367,0.7913175377868524,0.692139508016466,0.7169086276507378,OCC1CCC(CC1)CO,1 +1358,0.3817286209421686,0.0277156114322618,0.7009941500159825,0.6919662752311282,0.7142934622209938,CCCCOCC(C)O,1 +1025,0.3842558121404811,0.0413956838575518,0.759318651664624,0.8442396172091997,0.7189712923506026,CCCCC(COC(=O)CCCCCCC/C=C/CCCCCCCC)CC,1 +2790,0.5308040614876055,0.0355102965945158,0.8177496526780178,0.8450677642411715,0.7477092886540615,OC(=O)CCCCCCCCCCCCCCC(=O)NC(CCC(=O)ON1C(=O)CCC1=O)C(O)=O,1 +61,0.0451430564859758,0.0452924740642575,0.8069492529514048,0.1188899216985086,0.7372020111064902,C1C=CCC2C=CCC21,0 +252,0.3843231128011037,0.0312916866893016,0.7412843120626682,0.8444034549877011,0.7209299624611378,CC(=O)CC(=O)OCCCC,1 +1828,0.5327353661877487,0.057663107523535,0.8565424695044029,0.6957018848889639,0.7658863763530536,COc1cc2c(CC#N)cccc2cc1,0 +2613,0.5305302021659486,0.0527580780755817,0.8582361803065158,0.8444033912867885,0.7651952833165393,O=C1C(=Nc2ccccc12)C1Nc2ccccc2C1=O,0 +2143,0.5378159468725547,0.0870451125811571,0.8192404277822304,0.9946941609055164,0.7516018825217341,Cc1ccc(cc1Cl)[N+]([O-])=O,0 +1763,0.3827292349305962,0.0187347150146374,0.6903736904571112,0.3157592880751246,0.5190842506542316,COCCOCOCCOC,0 +2882,0.996444621075696,0.0337039543041028,0.9308322349192412,0.996676878178714,0.9891228200444412,OCC(F)(F)C(F)(F)C(F)(F)C(F)(F)C(F)(F)C(F)F,0 +2504,0.5614929432433735,0.2082133006347817,0.9135424516096812,0.8454736024737495,0.9560667906517892,Nc1cc(N)c(cc1)/N=N/c1ccc(cc1)-c1ccc(cc1)/N=N/c1c(cc2cc(c(/N=N/c3ccccc3)c(O)c2c1N)S(O)(=O)=O)S(O)(=O)=O,0 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+86,0.5297085302779401,0.023288652287042,0.7773832130211165,0.3149213891115792,0.7165146417871285,C1COCCN1CCOCCN1CCOCC1,0 +1391,0.537817887387424,0.0558872454771398,0.874507939115639,0.9946947483564292,0.7761990119435385,CCCCc1oc2ccc(cc2c1C(=O)c1ccc(O)cc1)[N+]([O-])=O,0 +421,0.5631402626362587,0.0538532917049246,0.8896848112920325,0.6919978514062949,0.951112140953638,CC(C)(C)c1cc(cc(c1O)-[n]1[n]c2ccccc2[n]1)C(C)(C)C,0 +914,0.3842539069842585,0.0349123217932442,0.7038691215554551,0.8442389704474085,0.7188210840709885,CCC(=O)OC=C,1 +931,0.529022992123978,0.0288866963957698,0.7108120856272898,0.6919803036702549,0.7151910065612217,CCC(C)NCCO,0 +2017,0.5286357421144947,0.0870430815240305,0.8025770095358827,0.3895382951000723,0.7510724973590714,Cc1cc(N)ccc1Cl,0 +2564,0.5286365157089872,0.2079056950751964,0.8781904308612057,0.8451423047554936,0.9556506227402896,Nc1cccc2cccc(c21)S(O)(=O)=O,0 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+1000,0.3833134543859593,0.0866199060371832,0.7600258115027629,0.8442387328285719,0.7381186464980565,CCCCC(CC)C(=O)Cl,1 +2456,0.5291818743711905,0.3217804609571831,0.799089567606983,0.8439873924512984,0.9520010897392542,NP(N)(=O)Oc1ccccc1,1 +988,0.3811160516915293,0.029837528041255,0.6797461866305622,0.6919661302475578,0.7142917987575843,CCCC(C)O,1 +203,0.04326772189126,0.0434109323587345,0.7679607448629481,0.2422936741958334,0.9495159233835334,CC(=C)CC(C)(C)C,0 +1729,0.537817384070121,0.0517941943195041,0.8529623788112429,0.9946946309774028,0.7621101617249219,COC(=O)c1ccc(cc1[N+]([O-])=O)C(=O)OC,0 +98,0.3845788138242518,0.0427021972477084,0.7564972372582823,0.8444077120940319,0.7396309459490482,C=C(CC(O)=O)C(O)=O,1 +666,0.3819080680612456,0.0508847806591024,0.8168534562193425,0.3148232848931408,0.7397412448941242,CC(CC)c1ccc(cc1)OCC1CO1,0 +1248,0.3811141399024431,0.0328096984129971,0.6968077282377033,0.6919804734576535,0.520150369398375,CCCCCCCCCCCCO,1 +2114,0.5378161377177655,0.0509369869266724,0.8229284651304064,0.994694218398826,0.7574790025568355,Cc1ccc(c(O)c1)[N+]([O-])=O,0 +2301,0.9961886039980472,0.0355369734981915,0.8869464704881518,0.9964371076574364,0.9814540113737426,FC(F)(F)C(F)(F)C(F)(F)OC(F)=C(F)F,0 +2241,0.2769766909512059,0.0886009337668979,0.8086157884409674,0.117751198116208,0.7510889154474752,ClCc1cc(Cl)c(Cl)cc1,0 +2554,0.5378211913911302,0.0870288456323253,0.8192404277822304,0.9946941746062924,0.7516018825217341,Nc1ccc(cc1Cl)[N+]([O-])=O,0 +3,0.0991243120075278,0.2278154026657528,0.6189721174939861,0.0,0.7133708240361367,BrC(Br)Br,0 +790,0.5309891704485623,0.0403035625591483,0.8958660598499066,0.8444059031873514,0.9548458721448092,CC1(C)CCC(OC(=O)CCCCCCCCC(=O)OC2CCC(C)(C)N(OCCCCCCCC)C2(C)C)C(C)(C)N1OCCCCCCCC,0 +442,0.0508393096468791,0.0510075810737616,0.817735960842041,0.1280886629563492,0.9507064721114517,CC(C)(C)c1ccccc1,0 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