name ambient_long

seed 100

numPairTransformLayers 8
warmupEpoches 2
numEpoches 20
motifProbability 1.0
logEverySteps 1000
checkpointEveryEpoches 1

batchSize 1
accumGrad 4
learningRate 1e-5

ambient True
t_nature 300
plddt_to_timestep ((90,-50),(80,300),(70,900))
dt_buffer 50
dataDirectory /scratch/projects/cgai/ambient_proteins/cluster/datasets/1300K/plddt70/afdb/repr/cluster_alntype1_tm50_alncov75_021425_021425_cluster
always_ambient_for_high_noises True

minimumNumResidues 20
maximumNumResidues 768
min_plddt 70

resume runs/ambient_long_phase2/version_0/checkpoints/epoch=49.ckpt