biobert-ft-ner / config.json
judithrosell's picture
Training in progress epoch 0
df725a1
{
"_name_or_path": "dmis-lab/biobert-v1.1",
"architectures": [
"BertForTokenClassification"
],
"attention_probs_dropout_prob": 0.1,
"classifier_dropout": null,
"gradient_checkpointing": false,
"hidden_act": "gelu",
"hidden_dropout_prob": 0.1,
"hidden_size": 768,
"id2label": {
"0": "I-Disease",
"1": "B-SO",
"2": "B-Pathological_formation",
"3": "B-Immaterial_anatomical_entity",
"4": "B-Amino_acid",
"5": "I-GO",
"6": "B-cell_line",
"7": "I-cell_line",
"8": "B-Anatomical_system",
"9": "I-CL",
"10": "I-Tissue",
"11": "I-Organism_subdivision",
"12": "I-GGP",
"13": "I-cell_type",
"14": "I-Pathological_formation",
"15": "B-Gene_or_gene_product",
"16": "B-Organism",
"17": "I-Anatomical_system",
"18": "B-Organism_subdivision",
"19": "B-Chemical",
"20": "B-Tissue",
"21": "I-RNA",
"22": "O",
"23": "I-Organism",
"24": "B-Taxon",
"25": "B-Multi-tissue_structure",
"26": "I-Cellular_component",
"27": "I-protein",
"28": "B-Simple_chemical",
"29": "B-Organ",
"30": "I-SO",
"31": "B-protein",
"32": "I-Taxon",
"33": "B-Cancer",
"34": "I-Gene_or_gene_product",
"35": "B-CHEBI",
"36": "I-Multi-tissue_structure",
"37": "B-cell_type",
"38": "I-DNA",
"39": "I-Simple_chemical",
"40": "I-Organism_substance",
"41": "I-Organ",
"42": "I-Cancer",
"43": "B-Disease",
"44": "B-GO",
"45": "I-CHEBI",
"46": "B-Developing_anatomical_structure",
"47": "I-Immaterial_anatomical_entity",
"48": "I-Amino_acid",
"49": "B-RNA",
"50": "I-Cell",
"51": "B-GGP",
"52": "B-Cellular_component",
"53": "I-Developing_anatomical_structure",
"54": "I-Chemical",
"55": "B-CL",
"56": "B-Organism_substance",
"57": "B-Cell",
"58": "B-DNA"
},
"initializer_range": 0.02,
"intermediate_size": 3072,
"label2id": {
"B-Amino_acid": 4,
"B-Anatomical_system": 8,
"B-CHEBI": 35,
"B-CL": 55,
"B-Cancer": 33,
"B-Cell": 57,
"B-Cellular_component": 52,
"B-Chemical": 19,
"B-DNA": 58,
"B-Developing_anatomical_structure": 46,
"B-Disease": 43,
"B-GGP": 51,
"B-GO": 44,
"B-Gene_or_gene_product": 15,
"B-Immaterial_anatomical_entity": 3,
"B-Multi-tissue_structure": 25,
"B-Organ": 29,
"B-Organism": 16,
"B-Organism_subdivision": 18,
"B-Organism_substance": 56,
"B-Pathological_formation": 2,
"B-RNA": 49,
"B-SO": 1,
"B-Simple_chemical": 28,
"B-Taxon": 24,
"B-Tissue": 20,
"B-cell_line": 6,
"B-cell_type": 37,
"B-protein": 31,
"I-Amino_acid": 48,
"I-Anatomical_system": 17,
"I-CHEBI": 45,
"I-CL": 9,
"I-Cancer": 42,
"I-Cell": 50,
"I-Cellular_component": 26,
"I-Chemical": 54,
"I-DNA": 38,
"I-Developing_anatomical_structure": 53,
"I-Disease": 0,
"I-GGP": 12,
"I-GO": 5,
"I-Gene_or_gene_product": 34,
"I-Immaterial_anatomical_entity": 47,
"I-Multi-tissue_structure": 36,
"I-Organ": 41,
"I-Organism": 23,
"I-Organism_subdivision": 11,
"I-Organism_substance": 40,
"I-Pathological_formation": 14,
"I-RNA": 21,
"I-SO": 30,
"I-Simple_chemical": 39,
"I-Taxon": 32,
"I-Tissue": 10,
"I-cell_line": 7,
"I-cell_type": 13,
"I-protein": 27,
"O": 22
},
"layer_norm_eps": 1e-12,
"max_position_embeddings": 512,
"model_type": "bert",
"num_attention_heads": 12,
"num_hidden_layers": 12,
"pad_token_id": 0,
"position_embedding_type": "absolute",
"transformers_version": "4.34.0",
"type_vocab_size": 2,
"use_cache": true,
"vocab_size": 28996
}