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- ---
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- license: mit
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- ---
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ ---
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+ language: en
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+ tags:
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+ - medical-imaging
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+ - mri
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+ - self-supervised
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+ - 3d
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+ - neuroimaging
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+ license: apache-2.0
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+ library_name: pytorch
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+ datasets:
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+ - custom
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+ ---
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+
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+ # SimCLR-MRI Pre-trained Encoder (SeqAug)
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+
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+ This repository contains a pre-trained 3D CNN encoder for MRI analysis. The model was trained using contrastive learning (SimCLR) with Bloch equation simulations to generate multi-contrast views of the same anatomy.
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+
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+ ## Model Description
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+
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+ The encoder is a 3D CNN with 5 convolutional blocks (64, 128, 256, 512, 768 channels), outputting 768-dimensional features. This SeqAug variant treats different simulated MRI sequences as strong augmentations during contrastive learning, encouraging sequence-robust representations.
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+
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+ ### Training Procedure
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+ - **Pre-training Data**: 51 qMRI datasets (22 healthy, 29 stroke subjects)
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+ - **Augmentations**: Bloch simulation-based sequence augmentation + standard transformations
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+ - **Input**: 3D MRI volumes (96×96×96)
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+ - **Output**: 768-dimensional feature vectors
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+
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+ ## Intended Uses
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+
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+ This encoder is particularly suited for:
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+ - Cross-sequence transfer learning
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+ - Multi-contrast MRI analysis
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+ - Sequence-robust feature extraction