Model 78 uploaded
Browse files
.gitattributes
CHANGED
@@ -47,3 +47,4 @@ Ensemble_of_models/gfm_0.229/gfm_0.229_epoch_6.pk filter=lfs diff=lfs merge=lfs
|
|
47 |
Ensemble_of_models/gfm_0.260/gfm_0.260_epoch_5.pk filter=lfs diff=lfs merge=lfs -text
|
48 |
Ensemble_of_models/gfm_0.351/gfm_0.351_epoch_2.pk filter=lfs diff=lfs merge=lfs -text
|
49 |
Ensemble_of_models/gfm_0.67/gfm_0.67_epoch_20.pk filter=lfs diff=lfs merge=lfs -text
|
|
|
|
47 |
Ensemble_of_models/gfm_0.260/gfm_0.260_epoch_5.pk filter=lfs diff=lfs merge=lfs -text
|
48 |
Ensemble_of_models/gfm_0.351/gfm_0.351_epoch_2.pk filter=lfs diff=lfs merge=lfs -text
|
49 |
Ensemble_of_models/gfm_0.67/gfm_0.67_epoch_20.pk filter=lfs diff=lfs merge=lfs -text
|
50 |
+
Ensemble_of_models/gfm_0.78/gfm_0.78_epoch_18.pk filter=lfs diff=lfs merge=lfs -text
|
Ensemble_of_models/gfm_0.78/config.json
ADDED
@@ -0,0 +1,129 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
{
|
2 |
+
"Verbosity": {
|
3 |
+
"level": 2
|
4 |
+
},
|
5 |
+
"NeuralNetwork": {
|
6 |
+
"Architecture": {
|
7 |
+
"model_type": "EGNN",
|
8 |
+
"equivariance": true,
|
9 |
+
"radius": 5,
|
10 |
+
"max_neighbours": 20,
|
11 |
+
"num_gaussians": 50,
|
12 |
+
"envelope_exponent": 5,
|
13 |
+
"int_emb_size": 64,
|
14 |
+
"basis_emb_size": 8,
|
15 |
+
"out_emb_size": 128,
|
16 |
+
"num_after_skip": 2,
|
17 |
+
"num_before_skip": 1,
|
18 |
+
"num_radial": 6,
|
19 |
+
"num_spherical": 7,
|
20 |
+
"num_filters": 126,
|
21 |
+
"edge_features": [
|
22 |
+
"length"
|
23 |
+
],
|
24 |
+
"hidden_dim": 371,
|
25 |
+
"num_conv_layers": 3,
|
26 |
+
"output_heads": {
|
27 |
+
"graph": {
|
28 |
+
"num_sharedlayers": 2,
|
29 |
+
"dim_sharedlayers": 50,
|
30 |
+
"num_headlayers": 2,
|
31 |
+
"dim_headlayers": [
|
32 |
+
890,
|
33 |
+
890
|
34 |
+
]
|
35 |
+
},
|
36 |
+
"node": {
|
37 |
+
"num_headlayers": 2,
|
38 |
+
"dim_headlayers": [
|
39 |
+
890,
|
40 |
+
890
|
41 |
+
],
|
42 |
+
"type": "mlp"
|
43 |
+
}
|
44 |
+
},
|
45 |
+
"task_weights": [
|
46 |
+
1,
|
47 |
+
100
|
48 |
+
],
|
49 |
+
"output_dim": [
|
50 |
+
1,
|
51 |
+
3
|
52 |
+
],
|
53 |
+
"output_type": [
|
54 |
+
"graph",
|
55 |
+
"node"
|
56 |
+
],
|
57 |
+
"num_nodes": 24,
|
58 |
+
"input_dim": 4,
|
59 |
+
"pna_deg": null,
|
60 |
+
"edge_dim": 1,
|
61 |
+
"freeze_conv_layers": false,
|
62 |
+
"initial_bias": null,
|
63 |
+
"activation_function": "relu",
|
64 |
+
"SyncBatchNorm": false
|
65 |
+
},
|
66 |
+
"Variables_of_interest": {
|
67 |
+
"input_node_features": [
|
68 |
+
0,
|
69 |
+
1,
|
70 |
+
2,
|
71 |
+
3
|
72 |
+
],
|
73 |
+
"output_names": [
|
74 |
+
"energy",
|
75 |
+
"forces"
|
76 |
+
],
|
77 |
+
"output_index": [
|
78 |
+
0,
|
79 |
+
2
|
80 |
+
],
|
81 |
+
"output_dim": [
|
82 |
+
1,
|
83 |
+
3
|
84 |
+
],
|
85 |
+
"type": [
|
86 |
+
"graph",
|
87 |
+
"node"
|
88 |
+
],
|
89 |
+
"graph_feature_names": [
|
90 |
+
"energy"
|
91 |
+
],
|
92 |
+
"graph_feature_dims": [
|
93 |
+
1
|
94 |
+
],
|
95 |
+
"node_feature_names": [
|
96 |
+
"atomic_number",
|
97 |
+
"cartesian_coordinates",
|
98 |
+
"forces"
|
99 |
+
],
|
100 |
+
"node_feature_dims": [
|
101 |
+
1,
|
102 |
+
3,
|
103 |
+
3
|
104 |
+
],
|
105 |
+
"denormalize_output": false
|
106 |
+
},
|
107 |
+
"Training": {
|
108 |
+
"num_epoch": 10000,
|
109 |
+
"EarlyStopping": true,
|
110 |
+
"perc_train": 0.9,
|
111 |
+
"loss_function_type": "mae",
|
112 |
+
"batch_size": 16,
|
113 |
+
"continue": 0,
|
114 |
+
"Optimizer": {
|
115 |
+
"type": "AdamW",
|
116 |
+
"learning_rate": 0.001
|
117 |
+
},
|
118 |
+
"conv_checkpointing": false,
|
119 |
+
"patience": 10,
|
120 |
+
"Checkpoint": true,
|
121 |
+
"checkpoint_warmup": 1
|
122 |
+
}
|
123 |
+
},
|
124 |
+
"Visualization": {
|
125 |
+
"plot_init_solution": true,
|
126 |
+
"plot_hist_solution": false,
|
127 |
+
"create_plots": true
|
128 |
+
}
|
129 |
+
}
|
Ensemble_of_models/gfm_0.78/gfm_0.78_epoch_18.pk
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:032aa5bd327e62e4637266887499d776ff38a2508bed89ffc577aefc4be978b3
|
3 |
+
size 52134042
|