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Browse files- README.md +71 -0
- config.json +69 -0
- model.safetensors +3 -0
- special_tokens_map.json +37 -0
- tokenizer.json +0 -0
- tokenizer_config.json +61 -0
- training_args.bin +3 -0
- vocab.txt +0 -0
README.md
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---
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library_name: transformers
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license: mit
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base_model: chandar-lab/NeoBERT
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tags:
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- generated_from_trainer
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metrics:
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- accuracy
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model-index:
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- name: NeoBERT_druglib_regression_6ep_5e-06lr
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results: []
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---
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<!-- This model card has been generated automatically according to the information the Trainer had access to. You
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should probably proofread and complete it, then remove this comment. -->
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# NeoBERT_druglib_regression_6ep_5e-06lr
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This model is a fine-tuned version of [chandar-lab/NeoBERT](https://huggingface.co/chandar-lab/NeoBERT) on the None dataset.
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It achieves the following results on the evaluation set:
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- Loss: 0.9323
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- Accuracy: 0.6284
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- Macro Precision: 0.6396
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- Macro Recall: 0.5598
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- Macro F1: 0.5573
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## Model description
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More information needed
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## Intended uses & limitations
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More information needed
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## Training and evaluation data
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More information needed
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## Training procedure
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### Training hyperparameters
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The following hyperparameters were used during training:
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- learning_rate: 5e-06
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- train_batch_size: 8
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- eval_batch_size: 8
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- seed: 42
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- optimizer: Use adamw_torch with betas=(0.9,0.999) and epsilon=1e-08 and optimizer_args=No additional optimizer arguments
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- lr_scheduler_type: linear
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- lr_scheduler_warmup_ratio: 0.2
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- num_epochs: 6
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- mixed_precision_training: Native AMP
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### Training results
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| Training Loss | Epoch | Step | Validation Loss | Accuracy | Macro Precision | Macro Recall | Macro F1 |
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|:-------------:|:-----:|:----:|:---------------:|:--------:|:---------------:|:------------:|:--------:|
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| 1.2053 | 1.0 | 311 | 1.0258 | 0.5900 | 0.5546 | 0.4409 | 0.4394 |
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| 0.743 | 2.0 | 622 | 0.8838 | 0.6527 | 0.6404 | 0.5392 | 0.5352 |
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| 0.5941 | 3.0 | 933 | 0.9091 | 0.6624 | 0.6102 | 0.5566 | 0.5674 |
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| 0.4384 | 4.0 | 1244 | 1.0823 | 0.6592 | 0.6108 | 0.5464 | 0.5493 |
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| 0.138 | 5.0 | 1555 | 1.3475 | 0.6543 | 0.5926 | 0.5503 | 0.5600 |
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| 0.0683 | 6.0 | 1866 | 1.4926 | 0.6495 | 0.5865 | 0.5571 | 0.5668 |
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### Framework versions
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- Transformers 4.47.0
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- Pytorch 2.5.1+cu121
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- Datasets 3.3.1
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- Tokenizers 0.21.0
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config.json
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{
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"_name_or_path": "chandar-lab/NeoBERT",
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"architectures": [
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"NeoBERTForSequenceClassification"
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],
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"auto_map": {
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"AutoConfig": "chandar-lab/NeoBERT--model.NeoBERTConfig",
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"AutoModel": "chandar-lab/NeoBERT--model.NeoBERT",
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"AutoModelForMaskedLM": "chandar-lab/NeoBERT--model.NeoBERTLMHead",
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"AutoModelForSequenceClassification": "chandar-lab/NeoBERT--model.NeoBERTForSequenceClassification"
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},
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"classifier_init_range": 0.02,
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"decoder_init_range": 0.02,
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"dim_head": 64,
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"embedding_init_range": 0.02,
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"hidden_size": 768,
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"id2label": {
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"0": "LABEL_0",
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"1": "LABEL_1",
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"2": "LABEL_2",
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"3": "LABEL_3",
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"4": "LABEL_4"
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},
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"intermediate_size": 3072,
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"kwargs": {
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"_commit_hash": "a4fbc49a61db10ff2db66140ae59c09d96c027f9",
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"architectures": [
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"NeoBERTLMHead"
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],
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"attn_implementation": null,
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"auto_map": {
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"AutoConfig": "chandar-lab/NeoBERT--model.NeoBERTConfig",
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"AutoModel": "chandar-lab/NeoBERT--model.NeoBERT",
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"AutoModelForMaskedLM": "chandar-lab/NeoBERT--model.NeoBERTLMHead",
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"AutoModelForSequenceClassification": "chandar-lab/NeoBERT--model.NeoBERTForSequenceClassification"
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},
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"classifier_init_range": 0.02,
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"dim_head": 64,
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"kwargs": {
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"classifier_init_range": 0.02,
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"pretrained_model_name_or_path": "google-bert/bert-base-uncased",
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"trust_remote_code": true
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},
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"model_type": "neobert",
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"pretrained_model_name_or_path": "google-bert/bert-base-uncased",
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"torch_dtype": "float32",
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"transformers_version": "4.48.2",
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"trust_remote_code": true
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},
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"label2id": {
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"LABEL_0": 0,
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"LABEL_1": 1,
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"LABEL_2": 2,
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"LABEL_3": 3,
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"LABEL_4": 4
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},
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"max_length": 4096,
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"model_type": "neobert",
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"norm_eps": 1e-05,
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"num_attention_heads": 12,
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"num_hidden_layers": 28,
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"pad_token_id": 0,
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"pretrained_model_name_or_path": "google-bert/bert-base-uncased",
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"problem_type": "single_label_classification",
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"torch_dtype": "float32",
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"transformers_version": "4.47.0",
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"trust_remote_code": true,
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"vocab_size": 30522
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}
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model.safetensors
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version https://git-lfs.github.com/spec/v1
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oid sha256:8ac01ccad99ef27afdb4b62034f50fc8bad0b0e71d4bb018775daf02b938f21b
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size 889059812
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special_tokens_map.json
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{
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"cls_token": {
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"content": "[CLS]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false
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},
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"mask_token": {
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"content": "[MASK]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false
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},
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"pad_token": {
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"content": "[PAD]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false
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},
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"sep_token": {
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"content": "[SEP]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false
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},
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"unk_token": {
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"content": "[UNK]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false
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}
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}
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tokenizer.json
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tokenizer_config.json
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{
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"added_tokens_decoder": {
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"0": {
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"content": "[PAD]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"100": {
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"content": "[UNK]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"101": {
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"content": "[CLS]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"102": {
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"content": "[SEP]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"103": {
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"content": "[MASK]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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}
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},
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"clean_up_tokenization_spaces": false,
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"cls_token": "[CLS]",
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"do_lower_case": true,
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"extra_special_tokens": {},
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"mask_token": "[MASK]",
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"model_input_names": [
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"input_ids",
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"attention_mask"
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],
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"model_max_length": 4096,
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"pad_token": "[PAD]",
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"sep_token": "[SEP]",
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"strip_accents": null,
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"tokenize_chinese_chars": true,
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"tokenizer_class": "BertTokenizer",
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"unk_token": "[UNK]",
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"vocab_size": 30522
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}
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training_args.bin
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version https://git-lfs.github.com/spec/v1
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oid sha256:718435625e87777a919da05820612c2f6b1d3204a732ac4cf49fc44b7ca19a84
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size 5368
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vocab.txt
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