Upload ProkBertForSequenceClassification

config.json

@@ -1,23 +1,32 @@
 {
-  "_name_or_path": "/home/c_evolb/scratch/pretrained_models/prokbert-mini-k6s2/checkpoint-6",
+  "_name_or_path": "neuralbioinfo/prokbert-mini-long",
   "architectures": [
-    "MegatronBertForMaskedLM"
+    "ProkBertForSequenceClassification"
   ],
   "attention_probs_dropout_prob": 0.1,
+  "auto_map": {
+    "AutoConfig": "neuralbioinfo/prokbert-mini-long--models.ProkBertConfig",
+    "AutoModel": "neuralbioinfo/prokbert-mini-long--models.ProkBertModel",
+    "AutoModelForMaskedLM": "neuralbioinfo/prokbert-mini-long--models.ProkBertForMaskedLM",
+    "AutoModelForSequenceClassification": "neuralbioinfo/prokbert-mini-long--models.ProkBertForSequenceClassification"
+  },
+  "classification_dropout_rate": 0.1,
   "hidden_act": "gelu",
   "hidden_dropout_prob": 0.1,
   "hidden_size": 384,
   "initializer_range": 0.02,
   "intermediate_size": 4096,
+  "kmer": 6,
   "layer_norm_eps": 1e-12,
   "max_position_embeddings": 2048,
-  "model_type": "megatron-bert",
+  "model_type": "prokbert",
   "num_attention_heads": 6,
   "num_hidden_layers": 6,
   "pad_token_id": 0,
   "position_embedding_type": "relative_key_query",
+  "shift": 2,
   "torch_dtype": "float32",
-  "transformers_version": "4.33.1",
+  "transformers_version": "4.48.0.dev0",
   "type_vocab_size": 2,
   "use_cache": true,
   "vocab_size": 4200

model.safetensors

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:119a2802093735c277b8d6909e3330781b27326b83ce0452fec8a00a348f0391
+size 106336124