locus_to_gene_egl / config.json
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chore: update model (run 05-11_manual_egl_old_l2g_hits)
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{
"sklearn": {
"columns": [
"studyLocusId",
"credibleSetConfidence",
"distanceFootprintMean",
"distanceFootprintMeanNeighbourhood",
"distanceSentinelFootprint",
"distanceSentinelFootprintNeighbourhood",
"distanceSentinelTss",
"distanceSentinelTssNeighbourhood",
"distanceTssMean",
"distanceTssMeanNeighbourhood",
"eQtlColocClppMaximum",
"eQtlColocClppMaximumNeighbourhood",
"eQtlColocH4Maximum",
"eQtlColocH4MaximumNeighbourhood",
"geneCount500kb",
"isProteinCoding",
"pQtlColocClppMaximum",
"pQtlColocClppMaximumNeighbourhood",
"pQtlColocH4Maximum",
"pQtlColocH4MaximumNeighbourhood",
"proteinGeneCount500kb",
"sQtlColocClppMaximum",
"sQtlColocClppMaximumNeighbourhood",
"sQtlColocH4Maximum",
"sQtlColocH4MaximumNeighbourhood",
"vepMaximum",
"vepMaximumNeighbourhood",
"vepMean",
"vepMeanNeighbourhood"
],
"environment": [
"scikit-learn=1.5.2"
],
"example_input": {
"credibleSetConfidence": [
0.75,
0.75,
0.75
],
"distanceFootprintMean": [
0.9955834746360779,
0.9958390593528748,
0.9838611483573914
],
"distanceFootprintMeanNeighbourhood": [
0.00971545372158289,
0.009760296903550625,
0.007658529095351696
],
"distanceSentinelFootprint": [
0.9955792427062988,
0.9958348274230957,
0.983856201171875
],
"distanceSentinelFootprintNeighbourhood": [
0.009715789929032326,
0.00976063497364521,
0.007658741902559996
],
"distanceSentinelTss": [
0.9955792427062988,
0.9958348274230957,
0.983856201171875
],
"distanceSentinelTssNeighbourhood": [
0.00974195171147585,
0.009786796756088734,
0.007684903685003519
],
"distanceTssMean": [
0.9955834746360779,
0.9958390593528748,
0.9838611483573914
],
"distanceTssMeanNeighbourhood": [
0.009741270914673805,
0.009786113165318966,
0.007684345822781324
],
"eQtlColocClppMaximum": [
0.0,
0.0,
0.0
],
"eQtlColocClppMaximumNeighbourhood": [
0.0,
0.0,
0.0
],
"eQtlColocH4Maximum": [
0.0,
0.0,
0.0
],
"eQtlColocH4MaximumNeighbourhood": [
0.0,
0.0,
0.0
],
"geneCount500kb": [
13.0,
13.0,
13.0
],
"isProteinCoding": [
0.0,
1.0,
1.0
],
"pQtlColocClppMaximum": [
0.0,
0.0,
0.0
],
"pQtlColocClppMaximumNeighbourhood": [
0.0,
0.0,
0.0
],
"pQtlColocH4Maximum": [
0.0,
0.0,
0.0
],
"pQtlColocH4MaximumNeighbourhood": [
0.0,
0.0,
0.0
],
"proteinGeneCount500kb": [
7.0,
7.0,
7.0
],
"sQtlColocClppMaximum": [
0.0,
0.0,
0.0
],
"sQtlColocClppMaximumNeighbourhood": [
0.0,
0.0,
0.0
],
"sQtlColocH4Maximum": [
0.0,
0.0,
0.0
],
"sQtlColocH4MaximumNeighbourhood": [
0.0,
0.0,
0.0
],
"studyLocusId": [
"0080a1923fa758d2016b4667710b49e9",
"0080a1923fa758d2016b4667710b49e9",
"0080a1923fa758d2016b4667710b49e9"
],
"vepMaximum": [
0.0,
0.0,
0.0
],
"vepMaximumNeighbourhood": [
-0.07333333790302277,
-0.07333333790302277,
-0.07333333790302277
],
"vepMean": [
0.0,
0.0,
0.0
],
"vepMeanNeighbourhood": [
-0.01638231799006462,
-0.01638231799006462,
-0.01638231799006462
]
},
"model": {
"file": "05-11_manual_egl_old_l2g_hits.skops"
},
"model_format": "skops",
"task": "tabular-classification"
}
}