popV
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tabula_sapiens_Endothelium

@@ -32,33 +32,33 @@ computed on a 10% random subset of the data that was not used for training.
 | Cell Type | N cells |  celltypist |  knn bbknn |  knn harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |
 | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
-| endothelial cell | 3174 | 0.82 | 0.79 | 0.83 | 0.70 | 0.00 | 0.51 | 0.74 | 0.81 | 0.87 |
-| capillary endothelial cell | 1538 | 0.80 | 0.73 | 0.78 | 0.56 | 0.00 | 0.56 | 0.74 | 0.80 | 0.83 |
-| cardiac endothelial cell | 1023 | 0.97 | 0.95 | 0.88 | 0.54 | 0.00 | 0.11 | 0.96 | 0.96 | 0.98 |
-| vein endothelial cell | 418 | 0.49 | 0.18 | 0.55 | 0.28 | 0.00 | 0.37 | 0.48 | 0.55 | 0.58 |
-| endothelial cell of artery | 349 | 0.64 | 0.51 | 0.67 | 0.43 | 0.00 | 0.50 | 0.60 | 0.68 | 0.71 |
-| endothelial cell of lymphatic vessel | 219 | 0.68 | 0.62 | 0.70 | 0.61 | 0.00 | 0.50 | 0.62 | 0.68 | 0.71 |
-| retinal blood vessel endothelial cell | 177 | 0.51 | 0.00 | 0.40 | 0.12 | 0.00 | 0.00 | 0.54 | 0.58 | 0.48 |
-| endothelial cell of vascular tree | 78 | 0.40 | 0.07 | 0.42 | 0.57 | 0.00 | 0.28 | 0.52 | 0.66 | 0.76 |
-| colon endothelial cell | 15 | 0.35 | 0.12 | 0.46 | 0.14 | 0.00 | 0.09 | 0.27 | 0.29 | 0.70 |
-| endothelial cell of arteriole | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
-| endothelial cell of venule | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
 The train accuracies are computed on the training data.
 | Cell Type | N cells |  celltypist |  knn bbknn |  knn harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |
 | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
-| endothelial cell | 30214 | 0.80 | 0.74 | 0.90 | 0.78 | 0.00 | 0.85 | 0.74 | 0.79 | 0.91 |
-| capillary endothelial cell | 13746 | 0.79 | 0.62 | 0.86 | 0.69 | 0.00 | 0.82 | 0.74 | 0.79 | 0.86 |
-| cardiac endothelial cell | 9050 | 0.96 | 0.86 | 0.91 | 0.70 | 0.00 | 0.98 | 0.95 | 0.95 | 0.99 |
-| vein endothelial cell | 4268 | 0.47 | 0.08 | 0.74 | 0.46 | 0.00 | 0.65 | 0.51 | 0.56 | 0.70 |
-| endothelial cell of artery | 3109 | 0.64 | 0.37 | 0.80 | 0.61 | 0.00 | 0.64 | 0.62 | 0.68 | 0.76 |
-| endothelial cell of lymphatic vessel | 2191 | 0.69 | 0.62 | 0.84 | 0.70 | 0.00 | 0.74 | 0.65 | 0.70 | 0.79 |
-| retinal blood vessel endothelial cell | 1878 | 0.49 | 0.00 | 0.76 | 0.31 | 0.00 | 0.98 | 0.59 | 0.65 | 0.88 |
-| endothelial cell of vascular tree | 785 | 0.40 | 0.00 | 0.74 | 0.64 | 0.00 | 0.80 | 0.51 | 0.60 | 0.74 |
-| colon endothelial cell | 284 | 0.20 | 0.01 | 0.67 | 0.28 | 0.00 | 0.64 | 0.51 | 0.59 | 0.83 |
-| endothelial cell of arteriole | 99 | 0.48 | 0.00 | 0.61 | 0.04 | 0.00 | 0.41 | 0.28 | 0.41 | 0.93 |
-| endothelial cell of venule | 43 | 0.00 | 0.00 | 0.46 | 0.04 | 0.00 | 0.54 | 0.38 | 0.62 | 0.87 |
 </details>

 | Cell Type | N cells |  celltypist |  knn bbknn |  knn harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |
 | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
+| endothelial cell | 3164 | 0.80 | 0.79 | 0.82 | 0.69 | 0.00 | 0.63 | 0.75 | 0.81 | 0.86 |
+| capillary endothelial cell | 1500 | 0.78 | 0.73 | 0.77 | 0.54 | 0.00 | 0.59 | 0.74 | 0.79 | 0.81 |
+| cardiac endothelial cell | 964 | 0.98 | 0.95 | 0.89 | 0.51 | 0.00 | 0.35 | 0.96 | 0.97 | 0.98 |
+| vein endothelial cell | 470 | 0.53 | 0.18 | 0.58 | 0.27 | 0.00 | 0.41 | 0.51 | 0.57 | 0.61 |
+| endothelial cell of artery | 331 | 0.64 | 0.59 | 0.73 | 0.48 | 0.00 | 0.54 | 0.61 | 0.67 | 0.70 |
+| endothelial cell of lymphatic vessel | 254 | 0.70 | 0.64 | 0.70 | 0.60 | 0.00 | 0.61 | 0.70 | 0.74 | 0.74 |
+| retinal blood vessel endothelial cell | 178 | 0.52 | 0.01 | 0.54 | 0.10 | 0.00 | 0.00 | 0.57 | 0.61 | 0.59 |
+| endothelial cell of vascular tree | 75 | 0.57 | 0.03 | 0.38 | 0.58 | 0.00 | 0.55 | 0.53 | 0.65 | 0.72 |
+| colon endothelial cell | 24 | 0.59 | 0.22 | 0.62 | 0.18 | 0.00 | 0.00 | 0.34 | 0.39 | 0.70 |
+| endothelial cell of arteriole | 9 | 0.00 | 0.00 | 0.18 | 0.00 | 0.00 | 0.05 | 0.30 | 0.38 | 0.20 |
+| endothelial cell of venule | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
 The train accuracies are computed on the training data.
 | Cell Type | N cells |  celltypist |  knn bbknn |  knn harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |
 | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
+| endothelial cell | 30194 | 0.78 | 0.74 | 0.90 | 0.78 | 0.00 | 0.88 | 0.73 | 0.79 | 0.91 |
+| capillary endothelial cell | 13774 | 0.77 | 0.62 | 0.86 | 0.69 | 0.00 | 0.84 | 0.74 | 0.79 | 0.86 |
+| cardiac endothelial cell | 9113 | 0.97 | 0.88 | 0.91 | 0.69 | 0.00 | 0.97 | 0.95 | 0.96 | 0.99 |
+| vein endothelial cell | 4218 | 0.48 | 0.08 | 0.74 | 0.46 | 0.00 | 0.65 | 0.51 | 0.55 | 0.69 |
+| endothelial cell of artery | 3130 | 0.62 | 0.42 | 0.80 | 0.62 | 0.00 | 0.64 | 0.60 | 0.67 | 0.74 |
+| endothelial cell of lymphatic vessel | 2160 | 0.65 | 0.61 | 0.83 | 0.70 | 0.00 | 0.75 | 0.67 | 0.69 | 0.76 |
+| retinal blood vessel endothelial cell | 1881 | 0.48 | 0.00 | 0.75 | 0.30 | 0.00 | 0.98 | 0.58 | 0.63 | 0.88 |
+| endothelial cell of vascular tree | 786 | 0.52 | 0.00 | 0.74 | 0.65 | 0.00 | 0.79 | 0.56 | 0.64 | 0.75 |
+| colon endothelial cell | 285 | 0.34 | 0.01 | 0.67 | 0.29 | 0.00 | 0.91 | 0.48 | 0.56 | 0.88 |
+| endothelial cell of arteriole | 98 | 0.00 | 0.00 | 0.60 | 0.07 | 0.00 | 0.74 | 0.36 | 0.71 | 0.94 |
+| endothelial cell of venule | 40 | 0.00 | 0.00 | 0.22 | 0.00 | 0.00 | 0.66 | 0.48 | 0.76 | 0.93 |
 </details>