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Browse files- OnClass.data-00000-of-00001 +1 -1
- OnClass.index +0 -0
- OnClass.meta +0 -0
- OnClass.npz +2 -2
- accuracies.json +2 -2
- celltypist.pkl +1 -1
- harmony_knn_classifier.joblib +2 -2
- popv_output/predictions.csv +0 -0
- preprocessing.json +0 -0
- pynndescent_index.joblib +2 -2
- scanvi/model.pt +2 -2
- scvi/model.pt +2 -2
- scvi_knn_classifier.joblib +2 -2
- svm_classifier.joblib +3 -0
- svm_classifier_cuml.joblib +1 -1
- xgboost_classifier.model +2 -2
OnClass.data-00000-of-00001
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OnClass.index
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OnClass.meta
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OnClass.npz
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accuracies.json
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"query_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| basal cell |
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"ref_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| basal cell |
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"query_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| basal cell | 3333 | 0.89 | 0.80 | 0.88 | 0.67 | 0.00 | 0.60 | 0.88 | 0.86 | 0.93 |\n| bladder urothelial cell | 2697 | 0.99 | 0.92 | 0.90 | 0.57 | 0.00 | 0.28 | 1.00 | 0.99 | 0.99 |\n| luminal epithelial cell of mammary gland | 1514 | 0.99 | 0.17 | 0.97 | 0.51 | 0.00 | 0.36 | 0.99 | 0.98 | 1.00 |\n| enterocyte of epithelium proper of duodenum | 1373 | 0.90 | 0.61 | 0.81 | 0.46 | 0.00 | 0.12 | 0.90 | 0.91 | 0.95 |\n| stratified squamous epithelial cell | 1201 | 0.85 | 0.81 | 0.90 | 0.66 | 0.00 | 0.63 | 0.86 | 0.85 | 0.89 |\n| acinar cell of salivary gland | 1186 | 0.93 | 0.86 | 0.91 | 0.46 | 0.00 | 0.48 | 0.96 | 0.95 | 0.96 |\n| pulmonary alveolar type 2 cell | 1166 | 0.97 | 0.96 | 0.96 | 0.66 | 0.00 | 0.75 | 0.97 | 0.96 | 0.97 |\n| conjunctival epithelial cell | 1137 | 0.91 | 0.73 | 0.83 | 0.40 | 0.00 | 0.20 | 0.96 | 0.92 | 0.95 |\n| luminal cell of prostate epithelium | 1089 | 0.89 | 0.80 | 0.92 | 0.56 | 0.00 | 0.27 | 0.96 | 0.95 | 0.96 |\n| kidney epithelial cell | 926 | 0.99 | 0.87 | 0.92 | 0.39 | 0.00 | 0.03 | 0.99 | 0.99 | 0.99 |\n| hepatocyte | 735 | 1.00 | 1.00 | 0.97 | 0.62 | 0.00 | 0.42 | 1.00 | 0.99 | 1.00 |\n| enterocyte of epithelium proper of ileum | 688 | 0.98 | 0.25 | 0.83 | 0.27 | 0.00 | 0.01 | 0.98 | 0.98 | 0.98 |\n| pancreatic acinar cell | 535 | 0.94 | 0.62 | 0.93 | 0.40 | 0.00 | 0.11 | 0.98 | 0.96 | 0.97 |\n| enterocyte of epithelium of large intestine | 457 | 0.79 | 0.38 | 0.54 | 0.31 | 0.00 | 0.46 | 0.81 | 0.84 | 0.82 |\n| corneal epithelial cell | 432 | 0.91 | 0.00 | 0.93 | 0.70 | 0.00 | 0.35 | 0.96 | 0.94 | 0.96 |\n| duct epithelial cell | 377 | 0.81 | 0.60 | 0.77 | 0.44 | 0.00 | 0.50 | 0.86 | 0.82 | 0.87 |\n| basal cell of prostate epithelium | 331 | 0.70 | 0.03 | 0.87 | 0.38 | 0.00 | 0.48 | 0.86 | 0.84 | 0.87 |\n| pulmonary alveolar type 1 cell | 295 | 0.98 | 0.97 | 0.96 | 0.81 | 0.00 | 0.75 | 0.97 | 0.94 | 0.97 |\n| pancreatic ductal cell | 261 | 0.86 | 0.16 | 0.87 | 0.64 | 0.00 | 0.61 | 0.94 | 0.91 | 0.92 |\n| small intestine goblet cell | 198 | 0.89 | 0.80 | 0.90 | 0.56 | 0.00 | 0.19 | 0.94 | 0.91 | 0.95 |\n| paneth cell of epithelium of small intestine | 192 | 0.63 | 0.58 | 0.71 | 0.20 | 0.00 | 0.25 | 0.64 | 0.71 | 0.78 |\n| club cell | 192 | 0.66 | 0.79 | 0.81 | 0.48 | 0.00 | 0.77 | 0.79 | 0.77 | 0.85 |\n| intestinal crypt stem cell of colon | 173 | 0.81 | 0.54 | 0.65 | 0.47 | 0.00 | 0.06 | 0.77 | 0.82 | 0.85 |\n| progenitor cell of mammary luminal epithelium | 183 | 0.99 | 0.00 | 0.98 | 0.98 | 0.00 | 0.91 | 0.98 | 0.96 | 0.99 |\n| epithelial cell | 156 | 0.99 | 0.89 | 0.83 | 0.41 | 0.00 | 0.38 | 0.99 | 0.97 | 0.98 |\n| large intestine goblet cell | 155 | 0.89 | 0.71 | 0.74 | 0.44 | 0.00 | 0.53 | 0.91 | 0.91 | 0.91 |\n| enterocyte of epithelium proper of small intestine | 151 | 0.46 | 0.00 | 0.33 | 0.15 | 0.00 | 0.00 | 0.71 | 0.69 | 0.75 |\n| epithelial cell of uterus | 132 | 0.98 | 0.51 | 0.79 | 0.25 | 0.00 | 0.12 | 0.98 | 0.94 | 0.99 |\n| acinar cell | 138 | 0.79 | 0.57 | 0.51 | 0.49 | 0.00 | 0.66 | 0.92 | 0.92 | 0.92 |\n| lung ciliated cell | 109 | 0.70 | 0.53 | 0.84 | 0.73 | 0.00 | 0.71 | 0.95 | 0.94 | 0.89 |\n| respiratory goblet cell | 112 | 0.53 | 0.40 | 0.73 | 0.48 | 0.00 | 0.42 | 0.61 | 0.62 | 0.77 |\n| salivary gland cell | 81 | 0.64 | 0.07 | 0.89 | 0.38 | 0.00 | 0.51 | 0.72 | 0.70 | 0.90 |\n| ciliated columnar cell of tracheobronchial tree | 58 | 0.54 | 0.32 | 0.76 | 0.55 | 0.00 | 0.21 | 0.94 | 0.86 | 0.86 |\n| intrahepatic cholangiocyte | 65 | 0.95 | 0.24 | 0.69 | 0.50 | 0.00 | 0.41 | 1.00 | 0.96 | 0.92 |\n| blood vessel smooth muscle cell | 70 | 0.99 | 0.75 | 0.90 | 0.84 | 0.00 | 0.41 | 0.99 | 0.99 | 1.00 |\n| intestinal crypt stem cell of small intestine | 42 | 0.00 | 0.21 | 0.29 | 0.07 | 0.00 | 0.12 | 0.33 | 0.37 | 0.40 |\n| myoepithelial cell | 52 | 0.73 | 0.34 | 0.88 | 0.73 | 0.00 | 0.56 | 0.72 | 0.62 | 0.84 |\n| intestinal tuft cell | 37 | 0.77 | 0.84 | 0.91 | 0.71 | 0.00 | 0.60 | 0.99 | 0.97 | 0.90 |\n| enterocyte of epithelium proper of jejunum | 46 | 0.00 | 0.00 | 0.36 | 0.09 | 0.00 | 0.11 | 0.52 | 0.47 | 0.61 |\n| serous cell of epithelium of trachea | 28 | 0.33 | 0.00 | 0.00 | 0.08 | 0.00 | 0.11 | 0.40 | 0.48 | 0.67 |\n| mesothelial cell | 30 | 0.80 | 0.75 | 0.60 | 0.84 | 0.00 | 0.71 | 1.00 | 0.93 | 0.97 |\n| ciliated epithelial cell | 26 | 0.90 | 0.00 | 0.58 | 0.67 | 0.00 | 0.06 | 0.93 | 0.92 | 0.88 |\n| mucus secreting cell | 35 | 0.68 | 0.22 | 0.75 | 0.41 | 0.00 | 0.27 | 0.64 | 0.78 | 0.82 |\n| supporting cell of vestibular epithelium | 28 | 0.92 | 0.00 | 0.68 | 0.73 | 0.00 | 0.44 | 1.00 | 0.93 | 1.00 |\n| enteroendocrine cell of small intestine | 32 | 0.50 | 0.43 | 0.81 | 0.51 | 0.00 | 0.50 | 0.82 | 0.70 | 0.70 |\n| transit amplifying cell of colon | 24 | 0.37 | 0.33 | 0.29 | 0.36 | 0.00 | 0.29 | 0.53 | 0.53 | 0.65 |\n| ovarian surface epithelial cell | 15 | 0.00 | 0.00 | 0.70 | 0.62 | 0.00 | 0.83 | 1.00 | 0.97 | 0.93 |\n| tracheal goblet cell | 25 | 0.00 | 0.18 | 0.67 | 0.42 | 0.00 | 0.25 | 0.82 | 0.70 | 0.80 |\n| paneth cell of colon | 17 | 0.00 | 0.10 | 0.55 | 0.15 | 0.00 | 0.44 | 0.67 | 0.40 | 0.69 |\n| glandular epithelial cell | 14 | 0.78 | 0.15 | 0.24 | 0.28 | 0.00 | 0.20 | 0.92 | 0.80 | 0.88 |\n| tuft cell of colon | 18 | 0.00 | 0.33 | 0.69 | 0.26 | 0.00 | 0.44 | 0.92 | 0.91 | 0.76 |\n| ionocyte | 17 | 0.75 | 0.59 | 0.69 | 0.52 | 0.00 | 0.41 | 0.86 | 0.68 | 0.79 |\n| neuro-medullary thymic epithelial cell | 9 | 0.46 | 0.44 | 0.76 | 0.54 | 0.00 | 0.29 | 0.78 | 0.82 | 0.55 |\n| sebum secreting cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| type B pancreatic cell | 14 | 0.00 | 0.00 | 0.87 | 0.70 | 0.00 | 0.81 | 0.97 | 0.88 | 0.97 |\n| myo-medullary thymic epithelial cell | 5 | 1.00 | 0.00 | 0.00 | 0.91 | 0.00 | 0.23 | 1.00 | 0.91 | 1.00 |\n| interstitial cell of Cajal | 7 | 0.54 | 0.00 | 0.83 | 0.92 | 0.00 | 0.26 | 1.00 | 0.92 | 1.00 |\n| retinal pigment epithelial cell | 9 | 1.00 | 0.75 | 0.94 | 0.95 | 0.00 | 0.30 | 1.00 | 1.00 | 1.00 |\n| peritubular myoid cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| pancreatic A cell | 10 | 0.00 | 0.00 | 0.90 | 0.46 | 0.00 | 1.00 | 0.95 | 0.95 | 1.00 |\n| vestibular dark cell | 4 | 0.00 | 0.00 | 0.00 | 0.40 | 0.00 | 0.21 | 1.00 | 0.89 | 1.00 |\n| type L enteroendocrine cell | 8 | 0.00 | 0.00 | 0.62 | 0.00 | 0.00 | 0.73 | 0.94 | 0.67 | 0.67 |\n| medullary thymic epithelial cell | 4 | 0.00 | 0.00 | 0.00 | 0.40 | 0.00 | 0.03 | 1.00 | 0.67 | 0.67 |\n| transit amplifying cell of small intestine | 4 | 0.00 | 0.00 | 0.40 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| taste receptor cell | 4 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.15 | 0.00 | 0.20 | 0.00 |\n| enterochromaffin-like cell | 7 | 0.00 | 0.00 | 0.44 | 0.18 | 0.00 | 0.34 | 0.73 | 0.67 | 0.25 |\n| pulmonary ionocyte | 1 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 |\n| enteroendocrine cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.11 | 1.00 | 0.00 | 0.00 |\n| serous cell of epithelium of bronchus | 1 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.17 | 1.00 | 0.00 | 1.00 |\n| pancreatic D cell | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| keratocyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| pancreatic PP cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| epithelial fate stem cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |",
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"ref_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| basal cell | 30183 | 0.89 | 0.75 | 0.94 | 0.78 | 0.00 | 0.87 | 0.87 | 0.86 | 0.95 |\n| bladder urothelial cell | 24535 | 0.99 | 0.89 | 0.94 | 0.72 | 0.00 | 0.97 | 1.00 | 0.99 | 1.00 |\n| luminal epithelial cell of mammary gland | 13909 | 0.99 | 0.00 | 0.98 | 0.72 | 0.00 | 0.99 | 0.99 | 0.98 | 1.00 |\n| enterocyte of epithelium proper of duodenum | 12122 | 0.90 | 0.11 | 0.88 | 0.63 | 0.00 | 0.96 | 0.92 | 0.92 | 0.96 |\n| stratified squamous epithelial cell | 11116 | 0.85 | 0.77 | 0.93 | 0.76 | 0.00 | 0.87 | 0.85 | 0.85 | 0.90 |\n| acinar cell of salivary gland | 11050 | 0.94 | 0.69 | 0.94 | 0.72 | 0.00 | 0.95 | 0.96 | 0.95 | 0.98 |\n| pulmonary alveolar type 2 cell | 10428 | 0.97 | 0.96 | 0.98 | 0.76 | 0.00 | 0.97 | 0.98 | 0.97 | 0.98 |\n| conjunctival epithelial cell | 9930 | 0.92 | 0.54 | 0.89 | 0.58 | 0.00 | 0.95 | 0.96 | 0.93 | 0.97 |\n| luminal cell of prostate epithelium | 9563 | 0.89 | 0.43 | 0.96 | 0.72 | 0.00 | 0.95 | 0.96 | 0.94 | 0.96 |\n| kidney epithelial cell | 8339 | 0.99 | 0.04 | 0.96 | 0.67 | 0.00 | 0.99 | 1.00 | 0.99 | 1.00 |\n| hepatocyte | 6675 | 1.00 | 0.99 | 0.98 | 0.80 | 0.00 | 0.99 | 1.00 | 1.00 | 1.00 |\n| enterocyte of epithelium proper of ileum | 5789 | 0.98 | 0.01 | 0.89 | 0.54 | 0.00 | 0.98 | 0.98 | 0.97 | 0.99 |\n| pancreatic acinar cell | 4947 | 0.95 | 0.03 | 0.97 | 0.71 | 0.00 | 0.98 | 0.99 | 0.97 | 0.99 |\n| enterocyte of epithelium of large intestine | 4110 | 0.78 | 0.28 | 0.79 | 0.56 | 0.00 | 0.87 | 0.83 | 0.86 | 0.85 |\n| corneal epithelial cell | 3748 | 0.92 | 0.00 | 0.95 | 0.76 | 0.00 | 0.92 | 0.96 | 0.95 | 0.96 |\n| duct epithelial cell | 3512 | 0.80 | 0.43 | 0.90 | 0.69 | 0.00 | 0.87 | 0.85 | 0.84 | 0.91 |\n| basal cell of prostate epithelium | 3164 | 0.72 | 0.00 | 0.94 | 0.66 | 0.00 | 0.85 | 0.88 | 0.83 | 0.90 |\n| pulmonary alveolar type 1 cell | 2821 | 0.98 | 0.94 | 0.98 | 0.83 | 0.00 | 0.91 | 0.98 | 0.96 | 0.98 |\n| pancreatic ductal cell | 2458 | 0.87 | 0.01 | 0.94 | 0.78 | 0.00 | 0.96 | 0.96 | 0.95 | 0.97 |\n| small intestine goblet cell | 1846 | 0.88 | 0.54 | 0.94 | 0.75 | 0.00 | 0.88 | 0.95 | 0.92 | 0.95 |\n| paneth cell of epithelium of small intestine | 1661 | 0.60 | 0.40 | 0.80 | 0.53 | 0.00 | 0.69 | 0.72 | 0.76 | 0.84 |\n| club cell | 1555 | 0.65 | 0.76 | 0.92 | 0.66 | 0.00 | 0.80 | 0.82 | 0.78 | 0.90 |\n| intestinal crypt stem cell of colon | 1559 | 0.79 | 0.26 | 0.85 | 0.57 | 0.00 | 0.84 | 0.86 | 0.86 | 0.92 |\n| progenitor cell of mammary luminal epithelium | 1511 | 0.98 | 0.00 | 0.99 | 0.97 | 0.00 | 0.96 | 0.97 | 0.96 | 0.99 |\n| epithelial cell | 1478 | 0.95 | 0.43 | 0.83 | 0.54 | 0.00 | 0.94 | 0.98 | 0.97 | 0.97 |\n| large intestine goblet cell | 1402 | 0.89 | 0.17 | 0.83 | 0.63 | 0.00 | 0.83 | 0.93 | 0.92 | 0.94 |\n| enterocyte of epithelium proper of small intestine | 1264 | 0.46 | 0.00 | 0.73 | 0.35 | 0.00 | 0.86 | 0.75 | 0.75 | 0.87 |\n| epithelial cell of uterus | 1274 | 0.98 | 0.11 | 0.90 | 0.49 | 0.00 | 0.95 | 0.99 | 0.96 | 0.99 |\n| acinar cell | 1204 | 0.76 | 0.18 | 0.79 | 0.75 | 0.00 | 0.94 | 0.92 | 0.93 | 0.94 |\n| lung ciliated cell | 1100 | 0.69 | 0.10 | 0.92 | 0.89 | 0.00 | 0.97 | 0.97 | 0.97 | 0.97 |\n| respiratory goblet cell | 928 | 0.61 | 0.40 | 0.89 | 0.67 | 0.00 | 0.64 | 0.60 | 0.60 | 0.86 |\n| salivary gland cell | 769 | 0.63 | 0.01 | 0.95 | 0.71 | 0.00 | 0.91 | 0.74 | 0.76 | 0.94 |\n| ciliated columnar cell of tracheobronchial tree | 655 | 0.48 | 0.12 | 0.86 | 0.82 | 0.00 | 0.88 | 0.97 | 0.88 | 0.96 |\n| intrahepatic cholangiocyte | 593 | 0.91 | 0.17 | 0.96 | 0.72 | 0.00 | 0.95 | 0.99 | 0.95 | 0.99 |\n| blood vessel smooth muscle cell | 583 | 0.98 | 0.51 | 0.95 | 0.83 | 0.00 | 0.90 | 1.00 | 0.99 | 0.99 |\n| intestinal crypt stem cell of small intestine | 545 | 0.00 | 0.16 | 0.46 | 0.29 | 0.00 | 0.43 | 0.58 | 0.60 | 0.68 |\n| myoepithelial cell | 434 | 0.78 | 0.21 | 0.94 | 0.85 | 0.00 | 0.70 | 0.75 | 0.64 | 0.89 |\n| intestinal tuft cell | 411 | 0.77 | 0.83 | 0.97 | 0.82 | 0.00 | 0.96 | 1.00 | 0.99 | 0.97 |\n| enterocyte of epithelium proper of jejunum | 359 | 0.00 | 0.00 | 0.65 | 0.24 | 0.00 | 0.94 | 0.60 | 0.52 | 0.93 |\n| serous cell of epithelium of trachea | 298 | 0.44 | 0.00 | 0.88 | 0.52 | 0.00 | 0.69 | 0.50 | 0.70 | 0.91 |\n| mesothelial cell | 295 | 0.68 | 0.68 | 0.86 | 0.84 | 0.00 | 0.90 | 0.96 | 0.96 | 0.94 |\n| ciliated epithelial cell | 294 | 0.95 | 0.00 | 0.80 | 0.74 | 0.00 | 0.93 | 0.98 | 0.98 | 0.99 |\n| mucus secreting cell | 235 | 0.57 | 0.03 | 0.89 | 0.63 | 0.00 | 0.72 | 0.64 | 0.80 | 0.90 |\n| supporting cell of vestibular epithelium | 239 | 0.87 | 0.00 | 0.68 | 0.77 | 0.00 | 0.91 | 1.00 | 0.96 | 1.00 |\n| enteroendocrine cell of small intestine | 232 | 0.56 | 0.53 | 0.92 | 0.74 | 0.00 | 0.85 | 0.95 | 0.92 | 0.94 |\n| transit amplifying cell of colon | 213 | 0.35 | 0.16 | 0.59 | 0.50 | 0.00 | 0.64 | 0.70 | 0.71 | 0.84 |\n| ovarian surface epithelial cell | 216 | 0.00 | 0.13 | 0.85 | 0.80 | 0.00 | 0.89 | 0.99 | 0.97 | 0.97 |\n| tracheal goblet cell | 201 | 0.00 | 0.16 | 0.90 | 0.68 | 0.00 | 0.59 | 0.87 | 0.72 | 0.93 |\n| paneth cell of colon | 200 | 0.00 | 0.07 | 0.72 | 0.53 | 0.00 | 0.64 | 0.77 | 0.51 | 0.88 |\n| glandular epithelial cell | 201 | 0.87 | 0.03 | 0.75 | 0.53 | 0.00 | 0.93 | 0.99 | 0.91 | 0.99 |\n| tuft cell of colon | 160 | 0.00 | 0.11 | 0.95 | 0.59 | 0.00 | 0.89 | 0.98 | 0.93 | 0.96 |\n| ionocyte | 143 | 0.72 | 0.29 | 0.83 | 0.68 | 0.00 | 0.64 | 0.91 | 0.82 | 0.88 |\n| neuro-medullary thymic epithelial cell | 115 | 0.48 | 0.01 | 0.90 | 0.85 | 0.00 | 0.67 | 0.87 | 0.91 | 0.90 |\n| sebum secreting cell | 105 | 0.00 | 0.00 | 0.90 | 0.30 | 0.00 | 0.36 | 0.95 | 0.80 | 0.98 |\n| type B pancreatic cell | 88 | 0.00 | 0.00 | 0.94 | 0.90 | 0.00 | 0.98 | 1.00 | 0.99 | 1.00 |\n| myo-medullary thymic epithelial cell | 72 | 0.90 | 0.00 | 0.96 | 0.84 | 0.00 | 0.97 | 0.97 | 0.95 | 0.99 |\n| interstitial cell of Cajal | 63 | 0.39 | 0.00 | 1.00 | 0.91 | 0.00 | 0.73 | 0.99 | 0.98 | 0.99 |\n| retinal pigment epithelial cell | 58 | 0.97 | 0.01 | 1.00 | 0.96 | 0.00 | 0.64 | 0.99 | 1.00 | 0.99 |\n| peritubular myoid cell | 61 | 0.00 | 0.00 | 0.73 | 0.63 | 0.00 | 0.90 | 1.00 | 0.92 | 0.96 |\n| pancreatic A cell | 38 | 0.00 | 0.00 | 0.96 | 0.89 | 0.00 | 0.96 | 1.00 | 1.00 | 1.00 |\n| vestibular dark cell | 41 | 0.00 | 0.00 | 0.70 | 0.24 | 0.00 | 0.63 | 1.00 | 0.88 | 0.99 |\n| type L enteroendocrine cell | 36 | 0.00 | 0.00 | 0.85 | 0.26 | 0.00 | 0.79 | 0.97 | 0.96 | 0.96 |\n| medullary thymic epithelial cell | 31 | 0.00 | 0.00 | 0.85 | 0.43 | 0.00 | 0.47 | 1.00 | 0.78 | 0.98 |\n| transit amplifying cell of small intestine | 30 | 0.00 | 0.00 | 0.44 | 0.18 | 0.00 | 0.31 | 0.87 | 0.87 | 0.93 |\n| taste receptor cell | 28 | 0.00 | 0.01 | 0.56 | 0.53 | 0.00 | 0.42 | 0.90 | 0.43 | 0.93 |\n| enterochromaffin-like cell | 20 | 0.00 | 0.00 | 0.83 | 0.56 | 0.00 | 0.51 | 0.98 | 1.00 | 1.00 |\n| pulmonary ionocyte | 24 | 0.00 | 0.00 | 0.89 | 0.54 | 0.00 | 0.69 | 0.98 | 0.84 | 0.96 |\n| enteroendocrine cell | 24 | 0.00 | 0.00 | 0.88 | 0.58 | 0.00 | 0.70 | 0.98 | 0.98 | 0.96 |\n| serous cell of epithelium of bronchus | 14 | 0.00 | 0.00 | 0.75 | 0.70 | 0.00 | 0.62 | 0.97 | 0.85 | 1.00 |\n| pancreatic D cell | 7 | 0.00 | 0.00 | 0.62 | 0.73 | 0.00 | 0.48 | 1.00 | 0.93 | 1.00 |\n| keratocyte | 7 | 0.00 | 0.00 | 0.44 | 0.00 | 0.00 | 0.70 | 0.48 | 0.50 | 0.60 |\n| pancreatic PP cell | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.33 | 1.00 | 1.00 | 1.00 |\n| epithelial fate stem cell | 1 | 0.00 | 0.00 | 0.00 | 0.67 | 0.00 | 0.17 | 0.22 | 1.00 | 1.00 |"
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celltypist.pkl
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harmony_knn_classifier.joblib
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