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popV
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tabula_sapiens_Germline

Joblib
popV
biology
genomics
single-cell
anndata_version:0.11.1
tissue: Testis
tissue: Ovary
Model card Files Community
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@@ -32,21 +32,21 @@ computed on a 10% random subset of the data that was not used for training.
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  | Cell Type | N cells | celltypist | knn on bbknn | knn on harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |
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  | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
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- | spermatid | 404 | 0.98 | 0.98 | 0.99 | 0.98 | 0.00 | 0.98 | 0.98 | 0.98 | 0.99 |
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- | spermatocyte | 301 | 0.97 | 0.97 | 0.98 | 0.97 | 0.00 | 0.96 | 0.98 | 0.97 | 0.98 |
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- | male germ cell | 13 | 0.96 | 0.96 | 0.96 | 0.93 | 0.00 | 0.93 | 1.00 | 0.92 | 0.96 |
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- | spermatogonium | 9 | 0.89 | 0.71 | 0.75 | 0.82 | 0.00 | 0.82 | 0.95 | 0.67 | 0.89 |
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  | oocyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
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  The train accuracies are computed on the training data.
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  | Cell Type | N cells | celltypist | knn on bbknn | knn on harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |
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  | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
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- | spermatid | 3605 | 0.98 | 0.00 | 0.99 | 0.99 | 0.00 | 0.99 | 0.99 | 0.98 | 0.99 |
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- | spermatocyte | 2769 | 0.97 | 0.00 | 0.99 | 0.99 | 0.00 | 0.98 | 0.99 | 0.98 | 0.99 |
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- | male germ cell | 103 | 0.96 | 0.00 | 0.98 | 0.97 | 0.00 | 0.99 | 1.00 | 0.99 | 1.00 |
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- | spermatogonium | 55 | 0.85 | 0.00 | 0.95 | 0.90 | 0.00 | 0.77 | 0.94 | 0.94 | 0.93 |
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- | oocyte | 11 | 0.92 | 0.00 | 1.00 | 0.92 | 0.00 | 0.65 | 1.00 | 1.00 | 1.00 |
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  </details>
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  | Cell Type | N cells | celltypist | knn on bbknn | knn on harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |
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  | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
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+ | spermatid | 400 | 0.98 | 0.98 | 0.99 | 0.99 | 0.00 | 0.98 | 0.99 | 0.97 | 0.99 |
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+ | spermatocyte | 310 | 0.97 | 0.98 | 0.98 | 0.98 | 0.00 | 0.97 | 0.98 | 0.95 | 0.98 |
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+ | male germ cell | 10 | 0.95 | 0.95 | 0.95 | 0.95 | 0.00 | 0.90 | 0.95 | 0.95 | 0.95 |
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+ | spermatogonium | 7 | 1.00 | 0.73 | 0.92 | 0.88 | 0.00 | 0.88 | 1.00 | 0.80 | 1.00 |
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  | oocyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
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  The train accuracies are computed on the training data.
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  | Cell Type | N cells | celltypist | knn on bbknn | knn on harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |
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  | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
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+ | spermatid | 3609 | 0.98 | 0.00 | 0.99 | 0.99 | 0.00 | 0.99 | 0.99 | 0.98 | 0.99 |
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+ | spermatocyte | 2760 | 0.97 | 0.00 | 0.99 | 0.99 | 0.00 | 0.98 | 0.98 | 0.97 | 0.99 |
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+ | male germ cell | 106 | 0.97 | 0.00 | 0.99 | 0.98 | 0.00 | 0.99 | 1.00 | 0.97 | 1.00 |
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+ | spermatogonium | 57 | 0.77 | 0.00 | 0.89 | 0.89 | 0.00 | 0.84 | 0.93 | 0.93 | 0.92 |
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+ | oocyte | 10 | 0.95 | 0.00 | 1.00 | 1.00 | 0.00 | 0.87 | 1.00 | 1.00 | 1.00 |
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  </details>
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