| { | |
| "query_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| luminal epithelial cell of mammary gland | 1535 | 0.99 | 0.95 | 1.00 | 0.99 | 0.00 | 0.97 | 0.99 | 0.99 | 1.00 |\n| fibroblast of breast | 530 | 0.98 | 0.97 | 0.99 | 0.98 | 0.00 | 0.99 | 0.99 | 0.98 | 0.99 |\n| CD8-positive, alpha-beta T cell | 262 | 0.89 | 0.90 | 0.90 | 0.85 | 0.00 | 0.85 | 0.89 | 0.90 | 0.92 |\n| basal cell | 204 | 0.98 | 0.94 | 0.98 | 0.96 | 0.00 | 0.92 | 0.99 | 0.97 | 0.99 |\n| progenitor cell of mammary luminal epithelium | 173 | 0.99 | 0.34 | 1.00 | 0.99 | 0.00 | 0.96 | 0.99 | 0.98 | 1.00 |\n| endothelial cell | 151 | 0.97 | 0.97 | 0.98 | 0.97 | 0.00 | 0.96 | 0.97 | 0.97 | 0.98 |\n| macrophage | 72 | 0.95 | 0.96 | 0.97 | 0.97 | 0.00 | 0.96 | 0.98 | 0.96 | 0.98 |\n| CD4-positive, alpha-beta T cell | 68 | 0.72 | 0.65 | 0.69 | 0.27 | 0.00 | 0.64 | 0.69 | 0.76 | 0.77 |\n| vascular associated smooth muscle cell | 47 | 0.94 | 0.96 | 0.97 | 0.95 | 0.00 | 0.91 | 0.92 | 0.91 | 0.97 |\n| plasma cell | 28 | 1.00 | 0.96 | 0.96 | 0.91 | 0.00 | 0.70 | 0.98 | 1.00 | 1.00 |\n| T cell | 20 | 0.50 | 0.19 | 0.37 | 0.29 | 0.00 | 0.51 | 0.55 | 0.51 | 0.56 |\n| mast cell | 2 | 0.40 | 0.00 | 1.00 | 0.00 | 0.00 | 0.33 | 0.80 | 0.80 | 0.80 |\n| B cell | 1 | 0.00 | 1.00 | 1.00 | 0.67 | 0.00 | 1.00 | 1.00 | 0.00 | 1.00 |\n| mature NK T cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.67 | 0.00 | 0.00 | 0.00 |\n| basophil | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| natural killer cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| regulatory T cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |", | |
| "ref_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| luminal epithelial cell of mammary gland | 13897 | 0.99 | 0.94 | 1.00 | 0.99 | 0.00 | 0.97 | 0.99 | 0.99 | 1.00 |\n| fibroblast of breast | 4740 | 0.97 | 0.96 | 0.99 | 0.99 | 0.00 | 0.98 | 0.99 | 0.99 | 0.99 |\n| CD8-positive, alpha-beta T cell | 2391 | 0.90 | 0.90 | 0.94 | 0.87 | 0.00 | 0.90 | 0.92 | 0.94 | 0.96 |\n| basal cell | 1615 | 0.94 | 0.90 | 0.98 | 0.97 | 0.00 | 0.92 | 0.97 | 0.96 | 0.98 |\n| progenitor cell of mammary luminal epithelium | 1521 | 0.99 | 0.04 | 0.99 | 0.99 | 0.00 | 0.94 | 0.98 | 0.98 | 0.99 |\n| endothelial cell | 1383 | 0.97 | 0.97 | 0.98 | 0.98 | 0.00 | 0.97 | 0.97 | 0.97 | 0.98 |\n| macrophage | 613 | 0.96 | 0.95 | 0.98 | 0.97 | 0.00 | 0.97 | 0.98 | 0.98 | 0.98 |\n| CD4-positive, alpha-beta T cell | 613 | 0.68 | 0.64 | 0.81 | 0.44 | 0.00 | 0.76 | 0.83 | 0.87 | 0.89 |\n| vascular associated smooth muscle cell | 519 | 0.94 | 0.93 | 0.97 | 0.94 | 0.00 | 0.94 | 0.96 | 0.94 | 0.97 |\n| plasma cell | 265 | 0.98 | 0.88 | 0.98 | 0.89 | 0.00 | 0.69 | 0.99 | 0.98 | 0.99 |\n| T cell | 203 | 0.56 | 0.19 | 0.66 | 0.31 | 0.00 | 0.64 | 0.80 | 0.81 | 0.85 |\n| mast cell | 35 | 0.55 | 0.09 | 0.87 | 0.68 | 0.00 | 0.93 | 1.00 | 0.97 | 0.99 |\n| B cell | 14 | 0.00 | 0.73 | 1.00 | 0.48 | 0.00 | 0.93 | 1.00 | 1.00 | 1.00 |\n| mature NK T cell | 13 | 0.00 | 0.00 | 0.27 | 0.00 | 0.00 | 0.51 | 1.00 | 1.00 | 0.70 |\n| basophil | 12 | 0.00 | 0.11 | 0.29 | 0.22 | 0.00 | 0.63 | 0.96 | 0.92 | 0.96 |\n| natural killer cell | 6 | 0.00 | 0.00 | 0.29 | 0.00 | 0.00 | 0.56 | 0.86 | 1.00 | 0.29 |\n| regulatory T cell | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.29 | 1.00 | 1.00 | 0.00 |" | |
| } |