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README.md
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@@ -32,21 +32,21 @@ computed on a 10% random subset of the data that was not used for training.
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| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |
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| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
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| eye photoreceptor cell |
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| enteroglial cell |
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| neuron | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
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| retinal bipolar neuron |
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| retina horizontal cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.
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The train accuracies are computed on the training data.
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| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |
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| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
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| eye photoreceptor cell |
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| enteroglial cell | 864 | 1.00 | 0.95 | 0.96 |
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| neuron |
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| retinal bipolar neuron |
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| retina horizontal cell | 4 | 0.00 | 0.00 | 0.00 | 0.
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</details>
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| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |
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| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
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| eye photoreceptor cell | 150 | 1.00 | 0.99 | 0.96 | 0.99 | 0.00 | 0.99 | 1.00 | 0.99 | 0.99 |
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| enteroglial cell | 78 | 1.00 | 0.99 | 0.95 | 0.97 | 0.00 | 0.99 | 1.00 | 1.00 | 1.00 |
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| neuron | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
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| retinal bipolar neuron | 4 | 0.89 | 0.40 | 0.40 | 0.57 | 0.00 | 0.89 | 1.00 | 0.75 | 0.86 |
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| retina horizontal cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
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The train accuracies are computed on the training data.
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| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |
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| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
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| eye photoreceptor cell | 1375 | 1.00 | 1.00 | 0.98 | 0.99 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |
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| enteroglial cell | 864 | 1.00 | 0.95 | 0.96 | 1.00 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |
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| neuron | 72 | 0.99 | 0.00 | 0.90 | 1.00 | 0.00 | 0.97 | 1.00 | 1.00 | 1.00 |
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| retinal bipolar neuron | 53 | 0.95 | 0.77 | 0.94 | 0.71 | 0.00 | 0.96 | 1.00 | 1.00 | 0.99 |
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| retina horizontal cell | 4 | 0.00 | 0.00 | 0.00 | 0.40 | 0.00 | 0.67 | 1.00 | 1.00 | 0.86 |
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</details>
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