{ | |
"popv_version": "0.5.0", | |
"anndata_version": "0.11.3", | |
"setup_dict": { | |
"ref_labels_key": "popv_labels", | |
"ref_batch_key": "batch_key", | |
"unknown_celltype_label": "unassigned" | |
}, | |
"prediction_keys": [ | |
"popv_celltypist_prediction", | |
"popv_knn_bbknn_prediction", | |
"popv_knn_harmony_prediction", | |
"popv_knn_on_scvi_prediction", | |
"popv_onclass_prediction", | |
"popv_scanvi_prediction", | |
"popv_svm_prediction", | |
"popv_xgboost_prediction" | |
], | |
"method_kwargs": {}, | |
"methods": [ | |
"CELLTYPIST", | |
"KNN_BBKNN", | |
"KNN_HARMONY", | |
"KNN_SCVI", | |
"ONCLASS", | |
"SCANVI_POPV", | |
"Support_Vector", | |
"XGboost" | |
], | |
"cellxgene_url": "https://cellxgene.cziscience.com/e/d8732da6-8d1d-42d9-b625-f2416c30054b.cxg/" | |
} |