Upload folder using huggingface_hub

OnClass.data-00000-of-00001

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:94df94c3a47eaf98737624f98eecc49d378f9f0c4570e334b74cb58233211553
+oid sha256:a067343fb464da8bb4485a4b8874d74246846b1f23692ee7652f07018e297a33
 size 27239224

OnClass.npz

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:6074ab9090556e5e129095fee6ebdb7094ae46f5220c540728b7f5484c639fe1
-size 144112081
+oid sha256:33cf2571b751140376fe8568f5b72f7835ef529abac9023a999cfd1c3e00b638
+size 144112071

accuracies.json

@@ -1,4 +1,4 @@
 {
-    "query_accuracy": "| Cell Type | N cells |  celltypist |  knn bbknn |  knn harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| basal cell | 1035 | 0.99 | 0.98 | 0.98 | 0.99 | 0.00 | 0.97 | 0.98 | 0.98 | 0.99 |\n| neutrophil | 450 | 0.99 | 0.99 | 0.98 | 0.99 | 0.00 | 0.97 | 0.99 | 0.99 | 0.99 |\n| fibroblast | 173 | 0.97 | 0.95 | 0.97 | 0.95 | 0.00 | 0.98 | 0.97 | 0.97 | 0.98 |\n| CD8-positive, alpha-beta T cell | 128 | 0.90 | 0.93 | 0.92 | 0.83 | 0.00 | 0.93 | 0.94 | 0.95 | 0.93 |\n| ciliated columnar cell of tracheobronchial tree | 74 | 0.95 | 0.97 | 0.95 | 0.98 | 0.00 | 0.95 | 0.96 | 0.96 | 0.96 |\n| macrophage | 74 | 0.97 | 0.99 | 0.97 | 0.96 | 0.00 | 0.92 | 0.99 | 0.97 | 0.98 |\n| B cell | 65 | 0.98 | 0.98 | 0.97 | 0.95 | 0.00 | 0.98 | 0.99 | 1.00 | 0.99 |\n| endothelial cell | 48 | 0.97 | 0.96 | 0.94 | 0.96 | 0.00 | 0.95 | 0.99 | 0.97 | 0.96 |\n| serous cell of epithelium of trachea | 33 | 0.72 | 0.17 | 0.82 | 0.74 | 0.00 | 0.63 | 0.68 | 0.64 | 0.83 |\n| plasma cell | 21 | 0.95 | 0.93 | 0.90 | 0.88 | 0.00 | 0.95 | 0.95 | 0.93 | 0.93 |\n| CD4-positive, alpha-beta T cell | 31 | 0.82 | 0.79 | 0.78 | 0.35 | 0.00 | 0.84 | 0.81 | 0.87 | 0.89 |\n| mucus secreting cell | 31 | 0.78 | 0.79 | 0.86 | 0.80 | 0.00 | 0.79 | 0.77 | 0.77 | 0.85 |\n| tracheal goblet cell | 33 | 0.76 | 0.68 | 0.92 | 0.82 | 0.00 | 0.87 | 0.88 | 0.86 | 0.89 |\n| connective tissue cell | 11 | 0.87 | 0.00 | 0.92 | 0.20 | 0.00 | 0.92 | 0.92 | 0.85 | 1.00 |\n| smooth muscle cell | 13 | 0.80 | 0.81 | 0.79 | 0.92 | 0.00 | 0.80 | 0.80 | 0.83 | 0.80 |\n| mast cell | 16 | 0.97 | 0.97 | 0.94 | 0.97 | 0.00 | 0.97 | 1.00 | 1.00 | 0.97 |\n| monocyte | 5 | 0.80 | 0.89 | 0.73 | 0.29 | 0.00 | 0.67 | 1.00 | 0.73 | 0.80 |\n| natural killer cell | 9 | 0.00 | 0.78 | 0.78 | 0.43 | 0.00 | 0.72 | 0.80 | 0.73 | 0.80 |\n| granulocyte | 6 | 0.00 | 0.00 | 0.29 | 0.00 | 0.00 | 0.32 | 0.53 | 0.53 | 0.29 |\n| mature NK T cell | 5 | 0.25 | 0.00 | 0.57 | 0.29 | 0.00 | 0.50 | 0.80 | 0.91 | 0.29 |\n| T cell | 2 | 0.00 | 0.00 | 0.67 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| ionocyte | 1 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.25 | 1.00 | 1.00 | 1.00 |\n| regulatory T cell | 3 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| intermediate monocyte | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| non-classical monocyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| innate lymphoid cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| plasmacytoid dendritic cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| myeloid dendritic cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |",
-    "ref_accuracy": "| Cell Type | N cells |  celltypist |  knn bbknn |  knn harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| basal cell | 9212 | 0.99 | 0.98 | 0.99 | 0.99 | 0.00 | 0.97 | 0.98 | 0.98 | 0.99 |\n| neutrophil | 4234 | 0.99 | 0.99 | 0.99 | 0.99 | 0.00 | 0.98 | 0.99 | 0.99 | 1.00 |\n| fibroblast | 1627 | 0.96 | 0.93 | 0.98 | 0.98 | 0.00 | 0.97 | 0.99 | 0.98 | 0.99 |\n| CD8-positive, alpha-beta T cell | 1074 | 0.90 | 0.91 | 0.94 | 0.89 | 0.00 | 0.97 | 0.97 | 0.98 | 0.95 |\n| ciliated columnar cell of tracheobronchial tree | 639 | 0.97 | 0.97 | 0.96 | 0.99 | 0.00 | 0.97 | 0.98 | 0.98 | 0.98 |\n| macrophage | 638 | 0.92 | 0.92 | 0.95 | 0.93 | 0.00 | 0.94 | 0.98 | 0.99 | 0.97 |\n| B cell | 562 | 0.96 | 0.96 | 0.98 | 0.95 | 0.00 | 0.98 | 0.99 | 1.00 | 0.99 |\n| endothelial cell | 538 | 0.98 | 0.98 | 0.99 | 0.99 | 0.00 | 0.97 | 1.00 | 0.99 | 0.99 |\n| serous cell of epithelium of trachea | 293 | 0.72 | 0.01 | 0.89 | 0.87 | 0.00 | 0.66 | 0.78 | 0.80 | 0.91 |\n| plasma cell | 271 | 0.97 | 0.98 | 0.99 | 0.93 | 0.00 | 0.98 | 1.00 | 1.00 | 1.00 |\n| CD4-positive, alpha-beta T cell | 247 | 0.72 | 0.62 | 0.78 | 0.55 | 0.00 | 0.90 | 0.92 | 0.95 | 0.84 |\n| mucus secreting cell | 239 | 0.76 | 0.73 | 0.90 | 0.88 | 0.00 | 0.86 | 0.86 | 0.86 | 0.92 |\n| tracheal goblet cell | 199 | 0.69 | 0.49 | 0.88 | 0.86 | 0.00 | 0.87 | 0.90 | 0.84 | 0.93 |\n| connective tissue cell | 141 | 0.74 | 0.00 | 0.94 | 0.94 | 0.00 | 0.93 | 0.98 | 0.94 | 0.97 |\n| smooth muscle cell | 118 | 0.81 | 0.75 | 0.87 | 0.85 | 0.00 | 0.87 | 0.91 | 0.89 | 0.89 |\n| mast cell | 103 | 0.96 | 0.96 | 0.96 | 0.99 | 0.00 | 0.94 | 1.00 | 1.00 | 1.00 |\n| monocyte | 76 | 0.60 | 0.44 | 0.71 | 0.56 | 0.00 | 0.79 | 0.97 | 0.99 | 0.84 |\n| natural killer cell | 55 | 0.00 | 0.65 | 0.75 | 0.50 | 0.00 | 0.83 | 0.89 | 0.91 | 0.86 |\n| granulocyte | 33 | 0.00 | 0.00 | 0.11 | 0.16 | 0.00 | 0.31 | 0.71 | 0.72 | 0.21 |\n| mature NK T cell | 32 | 0.28 | 0.06 | 0.69 | 0.42 | 0.00 | 0.89 | 0.94 | 0.97 | 0.76 |\n| T cell | 17 | 0.00 | 0.11 | 0.57 | 0.21 | 0.00 | 0.80 | 1.00 | 0.97 | 0.97 |\n| ionocyte | 17 | 0.00 | 0.00 | 0.87 | 0.52 | 0.00 | 0.38 | 1.00 | 1.00 | 0.97 |\n| regulatory T cell | 14 | 0.00 | 0.00 | 0.42 | 0.00 | 0.00 | 0.74 | 1.00 | 1.00 | 0.67 |\n| intermediate monocyte | 15 | 0.00 | 0.00 | 0.50 | 0.25 | 0.00 | 0.36 | 1.00 | 1.00 | 0.80 |\n| non-classical monocyte | 5 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.67 | 0.91 | 1.00 | 0.33 |\n| innate lymphoid cell | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.67 | 1.00 | 1.00 | 0.00 |\n| plasmacytoid dendritic cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |\n| myeloid dendritic cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.25 | 1.00 | 1.00 | 1.00 |"
+    "query_accuracy": "| Cell Type | N cells |  celltypist |  knn bbknn |  knn harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| basal cell | 1041 | 0.98 | 0.98 | 0.98 | 0.99 | 0.00 | 0.96 | 0.98 | 0.97 | 0.99 |\n| neutrophil | 451 | 0.99 | 0.99 | 0.99 | 0.99 | 0.00 | 0.97 | 0.98 | 0.99 | 0.99 |\n| fibroblast | 171 | 0.97 | 0.96 | 0.97 | 0.96 | 0.00 | 0.96 | 0.97 | 0.97 | 0.98 |\n| CD8-positive, alpha-beta T cell | 131 | 0.91 | 0.92 | 0.92 | 0.71 | 0.00 | 0.93 | 0.94 | 0.95 | 0.93 |\n| ciliated columnar cell of tracheobronchial tree | 73 | 0.96 | 0.97 | 0.94 | 0.99 | 0.00 | 0.92 | 0.95 | 0.96 | 0.96 |\n| macrophage | 63 | 0.97 | 0.97 | 0.93 | 0.95 | 0.00 | 0.94 | 0.96 | 0.95 | 0.97 |\n| B cell | 66 | 0.98 | 0.98 | 0.99 | 0.66 | 0.00 | 0.99 | 0.98 | 0.99 | 0.99 |\n| endothelial cell | 46 | 0.97 | 0.96 | 0.94 | 0.95 | 0.00 | 0.98 | 1.00 | 0.97 | 0.98 |\n| serous cell of epithelium of trachea | 34 | 0.58 | 0.06 | 0.77 | 0.85 | 0.00 | 0.53 | 0.64 | 0.64 | 0.77 |\n| plasma cell | 23 | 0.96 | 0.93 | 0.93 | 0.87 | 0.00 | 0.93 | 0.96 | 0.91 | 0.96 |\n| CD4-positive, alpha-beta T cell | 31 | 0.81 | 0.79 | 0.79 | 0.05 | 0.00 | 0.82 | 0.85 | 0.88 | 0.86 |\n| mucus secreting cell | 31 | 0.77 | 0.81 | 0.86 | 0.86 | 0.00 | 0.76 | 0.78 | 0.79 | 0.86 |\n| tracheal goblet cell | 33 | 0.78 | 0.67 | 0.86 | 0.88 | 0.00 | 0.82 | 0.89 | 0.89 | 0.94 |\n| connective tissue cell | 9 | 0.84 | 0.00 | 0.95 | 0.75 | 0.00 | 0.86 | 0.86 | 0.90 | 1.00 |\n| smooth muscle cell | 15 | 0.82 | 0.90 | 0.82 | 0.79 | 0.00 | 0.80 | 0.82 | 0.85 | 0.82 |\n| mast cell | 16 | 0.97 | 0.97 | 1.00 | 1.00 | 0.00 | 1.00 | 0.97 | 0.97 | 1.00 |\n| monocyte | 5 | 0.80 | 0.67 | 0.67 | 0.00 | 0.00 | 0.73 | 1.00 | 0.80 | 0.89 |\n| natural killer cell | 9 | 0.64 | 0.75 | 0.75 | 0.18 | 0.00 | 0.64 | 0.76 | 0.73 | 0.80 |\n| granulocyte | 6 | 0.00 | 0.00 | 0.29 | 0.00 | 0.00 | 0.26 | 0.50 | 0.44 | 0.00 |\n| mature NK T cell | 5 | 0.25 | 0.00 | 0.50 | 0.33 | 0.00 | 0.57 | 0.73 | 0.80 | 0.25 |\n| T cell | 2 | 0.00 | 0.67 | 0.67 | 0.00 | 0.00 | 0.33 | 0.00 | 0.00 | 0.00 |\n| ionocyte | 2 | 0.50 | 0.00 | 0.50 | 0.67 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |\n| regulatory T cell | 3 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| intermediate monocyte | 1 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| non-classical monocyte | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| innate lymphoid cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| plasmacytoid dendritic cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| myeloid dendritic cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |",
+    "ref_accuracy": "| Cell Type | N cells |  celltypist |  knn bbknn |  knn harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| basal cell | 9206 | 0.98 | 0.98 | 0.99 | 0.99 | 0.00 | 0.97 | 0.98 | 0.98 | 0.99 |\n| neutrophil | 4233 | 0.99 | 0.99 | 0.99 | 0.99 | 0.00 | 0.97 | 0.99 | 0.99 | 1.00 |\n| fibroblast | 1629 | 0.96 | 0.92 | 0.98 | 0.98 | 0.00 | 0.96 | 0.99 | 0.99 | 0.98 |\n| CD8-positive, alpha-beta T cell | 1071 | 0.91 | 0.90 | 0.94 | 0.83 | 0.00 | 0.96 | 0.98 | 0.98 | 0.96 |\n| ciliated columnar cell of tracheobronchial tree | 640 | 0.97 | 0.96 | 0.96 | 0.99 | 0.00 | 0.93 | 0.98 | 0.97 | 0.99 |\n| macrophage | 649 | 0.92 | 0.92 | 0.95 | 0.93 | 0.00 | 0.95 | 0.98 | 0.99 | 0.97 |\n| B cell | 561 | 0.97 | 0.95 | 0.98 | 0.81 | 0.00 | 0.99 | 1.00 | 1.00 | 0.99 |\n| endothelial cell | 540 | 0.98 | 0.98 | 0.98 | 0.99 | 0.00 | 0.97 | 0.99 | 0.99 | 0.99 |\n| serous cell of epithelium of trachea | 292 | 0.63 | 0.03 | 0.89 | 0.89 | 0.00 | 0.67 | 0.76 | 0.79 | 0.88 |\n| plasma cell | 269 | 0.97 | 0.97 | 0.99 | 0.95 | 0.00 | 0.99 | 1.00 | 0.99 | 1.00 |\n| CD4-positive, alpha-beta T cell | 247 | 0.73 | 0.61 | 0.78 | 0.34 | 0.00 | 0.86 | 0.94 | 0.95 | 0.86 |\n| mucus secreting cell | 239 | 0.75 | 0.73 | 0.89 | 0.89 | 0.00 | 0.84 | 0.87 | 0.86 | 0.92 |\n| tracheal goblet cell | 199 | 0.69 | 0.51 | 0.89 | 0.88 | 0.00 | 0.83 | 0.88 | 0.86 | 0.93 |\n| connective tissue cell | 143 | 0.78 | 0.00 | 0.93 | 0.92 | 0.00 | 0.92 | 0.96 | 0.92 | 0.96 |\n| smooth muscle cell | 116 | 0.80 | 0.73 | 0.87 | 0.89 | 0.00 | 0.80 | 0.91 | 0.91 | 0.87 |\n| mast cell | 103 | 0.96 | 0.96 | 0.96 | 0.97 | 0.00 | 0.98 | 1.00 | 1.00 | 1.00 |\n| monocyte | 76 | 0.52 | 0.52 | 0.71 | 0.63 | 0.00 | 0.88 | 0.96 | 0.97 | 0.85 |\n| natural killer cell | 55 | 0.63 | 0.61 | 0.77 | 0.42 | 0.00 | 0.85 | 0.92 | 0.92 | 0.94 |\n| granulocyte | 33 | 0.00 | 0.00 | 0.10 | 0.11 | 0.00 | 0.22 | 0.56 | 0.62 | 0.21 |\n| mature NK T cell | 32 | 0.28 | 0.00 | 0.69 | 0.33 | 0.00 | 0.87 | 0.97 | 0.97 | 0.87 |\n| T cell | 17 | 0.00 | 0.00 | 0.64 | 0.00 | 0.00 | 0.74 | 1.00 | 0.97 | 0.90 |\n| ionocyte | 16 | 0.47 | 0.00 | 0.81 | 0.64 | 0.00 | 0.85 | 0.97 | 1.00 | 0.97 |\n| regulatory T cell | 14 | 0.00 | 0.12 | 0.32 | 0.24 | 0.00 | 0.79 | 1.00 | 1.00 | 0.78 |\n| intermediate monocyte | 15 | 0.00 | 0.00 | 0.50 | 0.29 | 0.00 | 0.79 | 1.00 | 1.00 | 0.80 |\n| non-classical monocyte | 4 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.47 | 1.00 | 1.00 | 0.67 |\n| innate lymphoid cell | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.36 | 0.80 | 0.80 | 1.00 |\n| plasmacytoid dendritic cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 1.00 | 1.00 |\n| myeloid dendritic cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.25 | 1.00 | 1.00 | 1.00 |"
 }

celltypist.pkl

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:8e53d711aa046fb1c08c4623f956dba5efeab4cfbf33eacd81ad330b03471651
+oid sha256:29d38fc5886bf5714cfa2d21a04cb4f7529a60755ab01f48de623b09f1e9cb6c
 size 617893

harmony_knn_classifier.joblib

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:040371cb626f8e5ec16d86df160fc6eeb7c79638fad64cada58d558fbe668586
-size 15564194
+oid sha256:c8080ae48c49fa6cda318fc75ba3ab7c8f5f89e5c433a0f820027d5258946e6a
+size 15581938

preprocessing.json

@@ -982,7 +982,6 @@
         "ENSG00000121621",
         "ENSG00000121690",
         "ENSG00000121742",
-        "ENSG00000121775",
         "ENSG00000121797",
         "ENSG00000121864",
         "ENSG00000121895",
@@ -1242,6 +1241,7 @@
         "ENSG00000131725",
         "ENSG00000131747",
         "ENSG00000131771",
+        "ENSG00000131781",
         "ENSG00000131791",
         "ENSG00000131828",
         "ENSG00000131831",
@@ -1407,6 +1407,7 @@
         "ENSG00000136160",
         "ENSG00000136244",
         "ENSG00000136286",
+        "ENSG00000136327",
         "ENSG00000136383",
         "ENSG00000136449",
         "ENSG00000136463",
@@ -1416,6 +1417,7 @@
         "ENSG00000136628",
         "ENSG00000136630",
         "ENSG00000136689",
+        "ENSG00000136710",
         "ENSG00000136802",
         "ENSG00000136842",
         "ENSG00000136866",
@@ -1618,7 +1620,6 @@
         "ENSG00000143303",
         "ENSG00000143322",
         "ENSG00000143333",
-        "ENSG00000143344",
         "ENSG00000143363",
         "ENSG00000143365",
         "ENSG00000143373",
@@ -1802,6 +1803,7 @@
         "ENSG00000150551",
         "ENSG00000150630",
         "ENSG00000150636",
+        "ENSG00000150656",
         "ENSG00000150667",
         "ENSG00000150681",
         "ENSG00000150722",
@@ -1827,7 +1829,6 @@
         "ENSG00000151726",
         "ENSG00000151835",
         "ENSG00000151838",
-        "ENSG00000151892",
         "ENSG00000151914",
         "ENSG00000151917",
         "ENSG00000151967",
@@ -1858,7 +1859,6 @@
         "ENSG00000153002",
         "ENSG00000153044",
         "ENSG00000153066",
-        "ENSG00000153071",
         "ENSG00000153093",
         "ENSG00000153132",
         "ENSG00000153157",
@@ -1913,7 +1913,6 @@
         "ENSG00000155330",
         "ENSG00000155367",
         "ENSG00000155380",
-        "ENSG00000155545",
         "ENSG00000155592",
         "ENSG00000155636",
         "ENSG00000155659",
@@ -2268,6 +2267,7 @@
         "ENSG00000165325",
         "ENSG00000165355",
         "ENSG00000165383",
+        "ENSG00000165410",
         "ENSG00000165457",
         "ENSG00000165474",
         "ENSG00000165507",
@@ -2278,6 +2278,7 @@
         "ENSG00000165621",
         "ENSG00000165637",
         "ENSG00000165688",
+        "ENSG00000165689",
         "ENSG00000165698",
         "ENSG00000165699",
         "ENSG00000165716",
@@ -2345,6 +2346,7 @@
         "ENSG00000166946",
         "ENSG00000166959",
         "ENSG00000166965",
+        "ENSG00000166997",
         "ENSG00000167034",
         "ENSG00000167074",
         "ENSG00000167077",
@@ -2499,7 +2501,6 @@
         "ENSG00000170468",
         "ENSG00000170476",
         "ENSG00000170482",
-        "ENSG00000170500",
         "ENSG00000170509",
         "ENSG00000170522",
         "ENSG00000170542",
@@ -2581,10 +2582,10 @@
         "ENSG00000172348",
         "ENSG00000172379",
         "ENSG00000172382",
-        "ENSG00000172403",
         "ENSG00000172409",
         "ENSG00000172426",
         "ENSG00000172458",
+        "ENSG00000172476",
         "ENSG00000172548",
         "ENSG00000172551",
         "ENSG00000172594",
@@ -2674,6 +2675,7 @@
         "ENSG00000174844",
         "ENSG00000174928",
         "ENSG00000174951",
+        "ENSG00000175040",
         "ENSG00000175063",
         "ENSG00000175087",
         "ENSG00000175093",
@@ -2703,7 +2705,6 @@
         "ENSG00000175899",
         "ENSG00000175906",
         "ENSG00000175920",
-        "ENSG00000176014",
         "ENSG00000176024",
         "ENSG00000176040",
         "ENSG00000176055",
@@ -2761,6 +2762,7 @@
         "ENSG00000177679",
         "ENSG00000177692",
         "ENSG00000177721",
+        "ENSG00000177842",
         "ENSG00000177854",
         "ENSG00000177943",
         "ENSG00000177946",
@@ -2800,6 +2802,7 @@
         "ENSG00000178927",
         "ENSG00000178950",
         "ENSG00000178965",
+        "ENSG00000178966",
         "ENSG00000178971",
         "ENSG00000178977",
         "ENSG00000178996",
@@ -2838,7 +2841,6 @@
         "ENSG00000180089",
         "ENSG00000180096",
         "ENSG00000180185",
-        "ENSG00000180251",
         "ENSG00000180257",
         "ENSG00000180263",
         "ENSG00000180304",
@@ -2913,6 +2915,7 @@
         "ENSG00000182809",
         "ENSG00000182810",
         "ENSG00000182836",
+        "ENSG00000182871",
         "ENSG00000182872",
         "ENSG00000182885",
         "ENSG00000182916",
@@ -2947,6 +2950,7 @@
         "ENSG00000183784",
         "ENSG00000183873",
         "ENSG00000183876",
+        "ENSG00000183914",
         "ENSG00000184009",
         "ENSG00000184060",
         "ENSG00000184113",
@@ -3319,6 +3323,7 @@
         "ENSG00000198576",
         "ENSG00000198598",
         "ENSG00000198624",
+        "ENSG00000198670",
         "ENSG00000198691",
         "ENSG00000198712",
         "ENSG00000198720",
@@ -3393,7 +3398,6 @@
         "ENSG00000204531",
         "ENSG00000204536",
         "ENSG00000204540",
-        "ENSG00000204588",
         "ENSG00000204599",
         "ENSG00000204611",
         "ENSG00000204616",
@@ -3642,7 +3646,6 @@
         "ENSG00000235501",
         "ENSG00000235513",
         "ENSG00000235527",
-        "ENSG00000235545",
         "ENSG00000235560",
         "ENSG00000235688",
         "ENSG00000235750",
@@ -3803,7 +3806,6 @@
         "ENSG00000254122",
         "ENSG00000254470",
         "ENSG00000254614",
-        "ENSG00000254685",
         "ENSG00000254703",
         "ENSG00000254726",
         "ENSG00000254815",
@@ -3854,7 +3856,6 @@
         "ENSG00000259426",
         "ENSG00000259430",
         "ENSG00000259456",
-        "ENSG00000259475",
         "ENSG00000259488",
         "ENSG00000259583",
         "ENSG00000259687",
@@ -3887,7 +3888,6 @@
         "ENSG00000261455",
         "ENSG00000261485",
         "ENSG00000261488",
-        "ENSG00000261644",
         "ENSG00000261801",
         "ENSG00000262001",
         "ENSG00000262155",

pynndescent_index.joblib

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:df41c49235338fa652c956f20124b26dfe0bddb9fb1796264779fb2c885451ca
-size 16571424
+oid sha256:c342d761f73e307c221256b1c3a384a9ce7f302ce9cc96bbdf36b1dab8186f0f
+size 16570772

scanvi/model.pt

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:c07d7ddbbf155b14d91f43371e9eef4405dbbfe1e4e90ae8aa6a9ec519ac0aec
+oid sha256:75c89821f119a58d9f46859e010cb762c669981a21cce192906d70ed8934c95f
 size 11577004

scvi/model.pt

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:78008acc5711d11f1e505c1fa05f56d217d65a4d97001bfca3b3df492a98840f
+oid sha256:06c25a67b109d1ff712a125768d2a080dfb5ee4d3128c9c2ef114fd41480b913
 size 10992637

scvi_knn_classifier.joblib

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:d3939b24bc9cc77d694d757be47ebf3675c36492153874bcde7b7e75b8d9adc2
-size 8725186
+oid sha256:2c9050d4d425a9dd6562cbb845e48a98a964f2d1685fbbcd21f9558ccfbe00b3
+size 8728386

svm_classifier.joblib

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:2b3812f3034e90fd713390f5e5faa7b0cb20fb6491d8969f39100093eaa561ed
+size 4427569

svm_classifier_cuml.joblib

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:261f15fb443925f4826aa517fb04bcea98f01d30f992507b5a523f1301f83146
+oid sha256:795caca590f2bd9e3a8492c4146e4ab4612c68f750dea4ead0d9ab617717e998
 size 478747

xgboost_classifier.model

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:ea6546fc2af7f941e2f6015e11868ca7000d142a3199ea54cefdb595d84eca7d
-size 6701767
+oid sha256:167c8bbbf835ca159b6fc039b15844b1fe3778c72c59d390f59fcb401265cc9a
+size 6727761