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---
tags:
- generated_from_trainer
datasets:
- jnlpba
metrics:
- precision
- recall
- f1
- accuracy
model-index:
- name: biobert-base-cased-v1.2-finetuned-ner
results:
- task:
name: Token Classification
type: token-classification
dataset:
name: jnlpba
type: jnlpba
args: jnlpba
metrics:
- name: Precision
type: precision
value: 0.7192068453790534
- name: Recall
type: recall
value: 0.8313138686131387
- name: F1
type: f1
value: 0.7712075299216197
- name: Accuracy
type: accuracy
value: 0.9063193640796039
---
<!-- This model card has been generated automatically according to the information the Trainer had access to. You
should probably proofread and complete it, then remove this comment. -->
# biobert-base-cased-v1.2-finetuned-ner
This model is a fine-tuned version of [dmis-lab/biobert-base-cased-v1.2](https://huggingface.co/dmis-lab/biobert-base-cased-v1.2) on the jnlpba dataset.
It achieves the following results on the evaluation set:
- Loss: 0.3149
- Precision: 0.7192
- Recall: 0.8313
- F1: 0.7712
- Accuracy: 0.9063
## Model description
More information needed
## Intended uses & limitations
More information needed
## Training and evaluation data
More information needed
## Training procedure
### Training hyperparameters
The following hyperparameters were used during training:
- learning_rate: 2e-05
- train_batch_size: 16
- eval_batch_size: 16
- seed: 42
- optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
- lr_scheduler_type: linear
- num_epochs: 3
### Training results
| Training Loss | Epoch | Step | Validation Loss | Precision | Recall | F1 | Accuracy |
|:-------------:|:-----:|:----:|:---------------:|:---------:|:------:|:------:|:--------:|
| 0.2578 | 1.0 | 1160 | 0.2873 | 0.7118 | 0.8236 | 0.7636 | 0.9028 |
| 0.1953 | 2.0 | 2320 | 0.3022 | 0.7149 | 0.825 | 0.7660 | 0.9048 |
| 0.1572 | 3.0 | 3480 | 0.3149 | 0.7192 | 0.8313 | 0.7712 | 0.9063 |
### Framework versions
- Transformers 4.11.3
- Pytorch 1.9.1+cu102
- Datasets 1.13.2
- Tokenizers 0.10.3
|