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README.md

@@ -51,10 +51,10 @@ space might still be useful for analysis.
 
 | Metric                  | Training Value | Validation Value |
 |-------------------------|----------------|------------------|
-| Mean Absolute Error | 1.85  | 2.17           |
-| Pearson Correlation | 0.93  | 0.90  |
-| Spearman Correlation | 0.92 | 0.89  |
-| R² (R-Squared) | 0.84  | 0.76      |
+| Mean Absolute Error | 1.84  | 2.10           |
+| Pearson Correlation | 0.93  | 0.91  |
+| Spearman Correlation | 0.92 | 0.90  |
+| R² (R-Squared) | 0.84  | 0.78      |
 
 The gene-wise coefficient of variation summarizes how well variation between different genes is
 preserved by the generated model expression. This value is usually quite high.
@@ -63,10 +63,10 @@ preserved by the generated model expression. This value is usually quite high.
 
 | Metric                  | Training Value |
 |-------------------------|----------------|
-| Mean Absolute Error | 5.38   |
+| Mean Absolute Error | 5.34   |
 | Pearson Correlation | 0.91  |
 | Spearman Correlation | 0.97 |
-| R² (R-Squared) | 0.64  |
+| R² (R-Squared) | 0.65  |
 
 </details>
 
@@ -83,22 +83,22 @@ cell-type.
 
 | Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |
 | --- | --- | --- | --- | --- | --- | --- | --- |
-| CD4-positive, alpha-beta T cell | 0.95 | 3.15 | 0.54 | 0.62 | 0.21 | 0.79 | 2872.00 |
-| enterocyte of epithelium of large intestine | 0.93 | 2.89 | 0.51 | 0.80 | 0.23 | 0.77 | 2764.00 |
-| CD8-positive, alpha-beta T cell | 0.95 | 3.47 | 0.60 | 0.68 | 0.23 | 0.80 | 2105.00 |
-| fibroblast | 0.95 | 3.26 | 0.67 | 0.83 | 0.52 | 0.89 | 852.00 |
-| paneth cell of colon | 0.95 | 3.71 | 0.61 | 0.72 | 0.29 | 0.81 | 831.00 |
-| monocyte | 0.94 | 3.87 | 0.68 | 0.76 | 0.39 | 0.86 | 543.00 |
-| B cell | 0.93 | 4.26 | 0.61 | 0.62 | 0.28 | 0.79 | 469.00 |
-| large intestine goblet cell | 0.87 | 4.45 | 0.58 | 0.65 | 0.33 | 0.76 | 385.00 |
-| plasma cell | 0.89 | 4.12 | 0.63 | 0.68 | 0.24 | 0.84 | 330.00 |
-| intestinal crypt stem cell of large intestine | 0.89 | 5.03 | 0.56 | 0.58 | 0.32 | 0.75 | 114.00 |
-| transit amplifying cell of colon | 0.64 | 4.66 | 0.58 | 0.58 | 0.29 | 0.71 | 52.00 |
-| mast cell | 0.80 | 5.20 | 0.53 | 0.48 | 0.39 | 0.80 | 38.00 |
-| gut endothelial cell | 0.71 | 5.06 | 0.61 | 0.60 | 0.42 | 0.79 | 31.00 |
-| neutrophil | 0.66 | 4.12 | 0.68 | 0.67 | 0.36 | 0.79 | 22.00 |
-| intestinal enteroendocrine cell | 0.68 | 4.71 | 0.62 | 0.61 | 0.32 | 0.74 | 19.00 |
-| intestinal tuft cell | 0.66 | 5.60 | 0.47 | 0.44 | 0.32 | 0.77 | 12.00 |
+| CD4-positive, alpha-beta T cell | 0.94 | 2.93 | 0.59 | 0.67 | 0.20 | 0.78 | 2872.00 |
+| enterocyte of epithelium of large intestine | 0.93 | 2.73 | 0.54 | 0.82 | 0.23 | 0.77 | 2764.00 |
+| CD8-positive, alpha-beta T cell | 0.94 | 3.52 | 0.59 | 0.67 | 0.22 | 0.80 | 2105.00 |
+| fibroblast | 0.90 | 3.05 | 0.70 | 0.85 | 0.52 | 0.89 | 852.00 |
+| paneth cell of colon | 0.95 | 3.93 | 0.59 | 0.70 | 0.30 | 0.81 | 831.00 |
+| monocyte | 0.94 | 4.03 | 0.67 | 0.75 | 0.40 | 0.86 | 543.00 |
+| B cell | 0.94 | 4.25 | 0.61 | 0.62 | 0.29 | 0.79 | 469.00 |
+| large intestine goblet cell | 0.90 | 4.23 | 0.60 | 0.67 | 0.32 | 0.76 | 385.00 |
+| plasma cell | 0.90 | 3.87 | 0.65 | 0.69 | 0.25 | 0.84 | 330.00 |
+| intestinal crypt stem cell of large intestine | 0.83 | 5.06 | 0.56 | 0.57 | 0.31 | 0.74 | 114.00 |
+| transit amplifying cell of colon | 0.69 | 4.52 | 0.60 | 0.59 | 0.28 | 0.71 | 52.00 |
+| mast cell | 0.82 | 5.31 | 0.51 | 0.46 | 0.41 | 0.81 | 38.00 |
+| gut endothelial cell | 0.71 | 5.25 | 0.60 | 0.59 | 0.42 | 0.79 | 31.00 |
+| neutrophil | 0.67 | 4.18 | 0.68 | 0.65 | 0.36 | 0.79 | 22.00 |
+| intestinal enteroendocrine cell | 0.64 | 5.01 | 0.60 | 0.58 | 0.34 | 0.75 | 19.00 |
+| intestinal tuft cell | 0.63 | 5.22 | 0.50 | 0.47 | 0.31 | 0.77 | 12.00 |
 
 </details>