canergen commited on
Commit
42447d4
1 Parent(s): b815621

Upload folder using huggingface_hub

Browse files
Files changed (2) hide show
  1. adata.h5ad +1 -1
  2. metrics.json +3 -3
adata.h5ad CHANGED
@@ -1,3 +1,3 @@
1
  version https://git-lfs.github.com/spec/v1
2
- oid sha256:dde984139ef72bf1b386dc580dfb1e2f1c2752dbb8a868aef5afabd9cbe21ad4
3
  size 870450505
 
1
  version https://git-lfs.github.com/spec/v1
2
+ oid sha256:d97c7111e380d54cd2c694fe1d4e839df740b4d3f9593b1e0c2f0711315c8fd5
3
  size 870450505
metrics.json CHANGED
@@ -1,5 +1,5 @@
1
  {
2
- "cell_wise_cv": "| Metric | Training Value | Validation Value |\n|-------------------------|----------------|------------------|\n| Mean Absolute Error | 2.86 | 2.90 |\n| Pearson Correlation | 0.25 | 0.25 |\n| Spearman Correlation | 0.14 | 0.15 |\n| R\u00b2 (R-Squared) | -2.34 | -2.78 |",
3
- "gene_wise_cv": "| Metric | Training Value |\n|-------------------------|----------------|\n| Mean Absolute Error | 40.28 |\n| Pearson Correlation | 0.56 |\n| Spearman Correlation | 0.60 |\n| R\u00b2 (R-Squared) | -4.27 |",
4
- "diff_exp": "| Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |\n| --- | --- | --- | --- | --- | --- | --- | --- |\n| B cell | 0.90 | 0.78 | 0.62 | 0.93 | 0.30 | 0.87 | 15249.00 |\n| effector CD4-positive, alpha-beta T cell | 0.81 | 1.30 | 0.50 | 0.87 | 0.28 | 0.77 | 6908.00 |\n| effector CD8-positive, alpha-beta T cell | 0.83 | 1.30 | 0.58 | 0.86 | 0.27 | 0.77 | 5860.00 |\n| T cell | 0.72 | 1.77 | 0.52 | 0.80 | 0.26 | 0.71 | 3848.00 |\n| type I NK T cell | 0.75 | 1.61 | 0.54 | 0.82 | 0.30 | 0.71 | 3758.00 |\n| plasma cell | 0.85 | 1.56 | 0.61 | 0.89 | 0.41 | 0.91 | 2426.00 |\n| innate lymphoid cell | 0.79 | 1.98 | 0.42 | 0.66 | 0.26 | 0.58 | 2052.00 |\n| macrophage | 0.82 | 2.01 | 0.65 | 0.88 | 0.48 | 0.89 | 1086.00 |\n| regulatory T cell | 0.81 | 2.94 | 0.57 | 0.72 | 0.41 | 0.72 | 881.00 |\n| mature NK T cell | 0.81 | 4.31 | 0.49 | 0.56 | 0.43 | 0.66 | 437.00 |\n| classical monocyte | 0.87 | 4.23 | 0.61 | 0.68 | 0.48 | 0.76 | 161.00 |\n| endothelial cell | 0.74 | 3.83 | 0.59 | 0.75 | 0.60 | 0.86 | 143.00 |\n| intermediate monocyte | 0.80 | 3.95 | 0.63 | 0.71 | 0.51 | 0.79 | 134.00 |\n| mast cell | 0.78 | 5.96 | 0.51 | 0.45 | 0.45 | 0.77 | 119.00 |\n| stromal cell | 0.82 | 3.90 | 0.68 | 0.78 | 0.55 | 0.86 | 111.00 |\n| neutrophil | 0.82 | 5.76 | 0.55 | 0.52 | 0.42 | 0.84 | 107.00 |\n| CD1c-positive myeloid dendritic cell | 0.75 | 4.37 | 0.63 | 0.68 | 0.52 | 0.79 | 68.00 |\n| CD141-positive myeloid dendritic cell | 0.64 | 4.92 | 0.59 | 0.58 | 0.48 | 0.75 | 48.00 |\n| hematopoietic stem cell | 0.49 | 5.59 | 0.52 | 0.40 | 0.45 | 0.66 | 34.00 |\n| non-classical monocyte | 0.65 | 5.82 | 0.53 | 0.49 | 0.41 | 0.69 | 31.00 |\n| erythrocyte | 0.58 | 6.44 | 0.41 | 0.35 | 0.47 | 0.83 | 24.00 |\n| mature conventional dendritic cell | 0.43 | 6.40 | 0.49 | 0.39 | 0.37 | 0.60 | 17.00 |"
5
  }
 
1
  {
2
+ "cell_wise_cv": "| Metric | Training Value | Validation Value |\n|-------------------------|----------------|------------------|\n| Mean Absolute Error | 2.86 | 2.90 |\n| Pearson Correlation | 0.26 | 0.24 |\n| Spearman Correlation | 0.15 | 0.16 |\n| R\u00b2 (R-Squared) | -2.31 | -2.69 |",
3
+ "gene_wise_cv": "| Metric | Training Value |\n|-------------------------|----------------|\n| Mean Absolute Error | 40.24 |\n| Pearson Correlation | 0.56 |\n| Spearman Correlation | 0.60 |\n| R\u00b2 (R-Squared) | -4.25 |",
4
+ "diff_exp": "| Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |\n| --- | --- | --- | --- | --- | --- | --- | --- |\n| B cell | 0.91 | 0.78 | 0.62 | 0.94 | 0.30 | 0.87 | 15249.00 |\n| effector CD4-positive, alpha-beta T cell | 0.78 | 1.29 | 0.49 | 0.87 | 0.27 | 0.77 | 6908.00 |\n| effector CD8-positive, alpha-beta T cell | 0.84 | 1.40 | 0.54 | 0.87 | 0.27 | 0.77 | 5860.00 |\n| T cell | 0.71 | 1.76 | 0.51 | 0.81 | 0.25 | 0.72 | 3848.00 |\n| type I NK T cell | 0.74 | 1.66 | 0.50 | 0.80 | 0.31 | 0.71 | 3758.00 |\n| plasma cell | 0.86 | 1.57 | 0.61 | 0.89 | 0.41 | 0.91 | 2426.00 |\n| innate lymphoid cell | 0.78 | 1.95 | 0.45 | 0.67 | 0.25 | 0.59 | 2052.00 |\n| macrophage | 0.80 | 2.02 | 0.65 | 0.88 | 0.48 | 0.89 | 1086.00 |\n| regulatory T cell | 0.79 | 3.02 | 0.55 | 0.71 | 0.41 | 0.71 | 881.00 |\n| mature NK T cell | 0.77 | 3.97 | 0.53 | 0.60 | 0.41 | 0.65 | 437.00 |\n| classical monocyte | 0.89 | 4.04 | 0.63 | 0.70 | 0.46 | 0.76 | 161.00 |\n| endothelial cell | 0.75 | 3.66 | 0.62 | 0.76 | 0.60 | 0.85 | 143.00 |\n| intermediate monocyte | 0.77 | 4.11 | 0.61 | 0.70 | 0.51 | 0.79 | 134.00 |\n| mast cell | 0.79 | 6.26 | 0.48 | 0.43 | 0.45 | 0.77 | 119.00 |\n| stromal cell | 0.79 | 4.15 | 0.65 | 0.77 | 0.56 | 0.86 | 111.00 |\n| neutrophil | 0.84 | 5.75 | 0.55 | 0.52 | 0.41 | 0.84 | 107.00 |\n| CD1c-positive myeloid dendritic cell | 0.73 | 4.22 | 0.64 | 0.70 | 0.53 | 0.79 | 68.00 |\n| CD141-positive myeloid dendritic cell | 0.71 | 5.20 | 0.56 | 0.55 | 0.49 | 0.75 | 48.00 |\n| hematopoietic stem cell | 0.44 | 5.68 | 0.51 | 0.41 | 0.46 | 0.65 | 34.00 |\n| non-classical monocyte | 0.61 | 5.62 | 0.55 | 0.51 | 0.41 | 0.69 | 31.00 |\n| erythrocyte | 0.53 | 6.65 | 0.40 | 0.34 | 0.49 | 0.83 | 24.00 |\n| mature conventional dendritic cell | 0.47 | 6.83 | 0.45 | 0.33 | 0.39 | 0.61 | 17.00 |"
5
  }