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0000000000000000000000000000000000000000..0967ef424bce6791893e9a57bb952f80fd536e93 --- /dev/null +++ b/lightning_logs/version_2/hparams.yaml @@ -0,0 +1 @@ +{} diff --git a/metrics.json b/metrics.json new file mode 100644 index 0000000000000000000000000000000000000000..fb3d0d6620ad81e42e88c7b7def9f66d3f0999b5 --- /dev/null +++ b/metrics.json @@ -0,0 +1,5 @@ +{ + "cell_wise_cv": "| Metric | Training Value | Validation Value |\n|-------------------------|----------------|------------------|\n| Mean Absolute Error | 2.47 | 2.54 |\n| Pearson Correlation | 0.49 | 0.45 |\n| Spearman Correlation | 0.42 | 0.39 |\n| R\u00b2 (R-Squared) | -0.40 | -0.50 |", + "gene_wise_cv": "| Metric | Training Value |\n|-------------------------|----------------|\n| Mean Absolute Error | 23.50 |\n| Pearson Correlation | 0.75 |\n| Spearman Correlation | 0.86 |\n| R\u00b2 (R-Squared) | -0.51 |", + "diff_exp": "| Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |\n| --- | --- | --- | --- | --- | --- | --- | --- |\n| mesenchymal stem cell | 0.92 | 0.95 | 0.67 | 0.90 | 0.39 | 0.85 | 14148.00 |\n| skeletal muscle satellite stem cell | 0.84 | 1.77 | 0.50 | 0.77 | 0.36 | 0.78 | 4831.00 |\n| endothelial cell of vascular tree | 0.88 | 2.03 | 0.53 | 0.75 | 0.34 | 0.79 | 3602.00 |\n| capillary endothelial cell | 0.91 | 2.68 | 0.53 | 0.68 | 0.33 | 0.76 | 2015.00 |\n| macrophage | 0.88 | 2.79 | 0.50 | 0.73 | 0.39 | 0.83 | 1989.00 |\n| pericyte | 0.88 | 2.64 | 0.55 | 0.69 | 0.39 | 0.76 | 1794.00 |\n| CD8-positive, alpha-beta T cell | 0.79 | 5.74 | 0.48 | 0.57 | 0.28 | 0.80 | 536.00 |\n| T cell | 0.85 | 5.41 | 0.48 | 0.50 | 0.37 | 0.78 | 407.00 |\n| fast muscle cell | 0.92 | 6.68 | 0.50 | 0.47 | 0.34 | 0.91 | 266.00 |\n| tendon cell | 0.64 | 5.28 | 0.47 | 0.43 | 0.40 | 0.67 | 234.00 |\n| CD4-positive, alpha-beta T cell | 0.78 | 6.17 | 0.48 | 0.53 | 0.34 | 0.75 | 221.00 |\n| slow muscle cell | 0.94 | 6.15 | 0.53 | 0.50 | 0.33 | 0.89 | 163.00 |\n| mature NK T cell | 0.84 | 7.17 | 0.48 | 0.52 | 0.36 | 0.76 | 137.00 |\n| endothelial cell of lymphatic vessel | 0.48 | 6.39 | 0.41 | 0.34 | 0.40 | 0.66 | 134.00 |\n| endothelial cell of artery | 0.74 | 5.70 | 0.52 | 0.49 | 0.39 | 0.74 | 133.00 |\n| smooth muscle cell | 0.79 | 5.64 | 0.55 | 0.50 | 0.38 | 0.76 | 58.00 |\n| mast cell | 0.58 | 7.75 | 0.37 | 0.36 | 0.38 | 0.81 | 46.00 |\n| erythrocyte | 0.09 | 5.27 | 0.20 | 0.39 | 0.64 | 0.98 | 20.00 |\n| mesothelial cell | 0.18 | 7.71 | 0.36 | 0.27 | 0.38 | 0.72 | 12.00 |" +} \ No newline at end of file diff --git a/model.pt b/model.pt index 2dbeaea43a636e27a1b726678a49a762233b4ad7..a05b3448ed073d024f77366bb01f570e5e6c0b52 100644 --- a/model.pt +++ b/model.pt @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:20fc0684f9c587ec0555209c21c94fa702f39e01bf644c880a7fff14a9d7a283 -size 4727550 +oid sha256:d683ee575e1268e2a54e5fdaacd88f5fa044ce067f86348705506f2188863fb6 +size 3648382