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adata.h5ad

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lightning_logs/version_2/hparams.yaml

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metrics.json

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+{
+    "cell_wise_cv": "| Metric                  | Training Value | Validation Value |\n|-------------------------|----------------|------------------|\n| Mean Absolute Error | 1.50  | 1.68           |\n| Pearson Correlation | 0.86  | 0.83  |\n| Spearman Correlation | 0.88 | 0.84  |\n| R\u00b2 (R-Squared) | 0.65  | 0.58      |",
+    "gene_wise_cv": "| Metric                  | Training Value |\n|-------------------------|----------------|\n| Mean Absolute Error | 13.39   |\n| Pearson Correlation | 0.69  |\n| Spearman Correlation | 0.74 |\n| R\u00b2 (R-Squared) | -0.47  |",
+    "diff_exp": "| Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |\n| --- | --- | --- | --- | --- | --- | --- | --- |\n| pancreatic acinar cell | 0.95 | 0.63 | 0.75 | 0.94 | 0.07 | 0.86 | 5534.00 |\n| pancreatic ductal cell | 0.94 | 0.88 | 0.78 | 0.97 | 0.49 | 0.93 | 2431.00 |\n| endothelial cell | 0.90 | 1.34 | 0.75 | 0.95 | 0.50 | 0.94 | 2100.00 |\n| myeloid cell | 0.84 | 1.40 | 0.72 | 0.96 | 0.51 | 0.94 | 1862.00 |\n| T cell | 0.91 | 2.64 | 0.67 | 0.84 | 0.38 | 0.83 | 573.00 |\n| pancreatic stellate cell | 0.88 | 2.15 | 0.74 | 0.90 | 0.50 | 0.89 | 393.00 |\n| B cell | 0.58 | 4.18 | 0.67 | 0.80 | 0.27 | 0.73 | 144.00 |\n| type B pancreatic cell | 0.78 | 3.40 | 0.70 | 0.82 | 0.21 | 0.83 | 99.00 |\n| pancreatic A cell | 0.76 | 4.23 | 0.73 | 0.80 | 0.23 | 0.70 | 71.00 |\n| pancreatic PP cell | 0.70 | 4.86 | 0.71 | 0.81 | 0.15 | 0.73 | 71.00 |\n| plasma cell | 0.72 | 3.38 | 0.67 | 0.73 | 0.22 | 0.84 | 63.00 |\n| mast cell | 0.63 | 4.96 | 0.73 | 0.80 | 0.17 | 0.69 | 53.00 |\n| fibroblast | 0.73 | 3.89 | 0.68 | 0.72 | 0.35 | 0.75 | 47.00 |\n| mature NK T cell | 0.68 | 4.51 | 0.64 | 0.63 | 0.36 | 0.71 | 47.00 |"
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model.pt

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