canergen commited on
Commit
c83dee6
1 Parent(s): bf19e40

Upload folder using huggingface_hub

Browse files
Files changed (3) hide show
  1. adata.h5ad +1 -1
  2. metrics.json +3 -3
  3. model.pt +1 -1
adata.h5ad CHANGED
@@ -1,3 +1,3 @@
1
  version https://git-lfs.github.com/spec/v1
2
- oid sha256:b6e826e7c1ce0850dd9a0e9b879b6b311478e610f5ded7c661d45fd09900171f
3
  size 14689904
 
1
  version https://git-lfs.github.com/spec/v1
2
+ oid sha256:65a34c17d931ed2e2553f034a1caa5b89f523d07e6ddd6f0af0dae9e9dc7309f
3
  size 14689904
metrics.json CHANGED
@@ -1,5 +1,5 @@
1
  {
2
- "cell_wise_cv": "| Metric | Training Value | Validation Value |\n|-------------------------|----------------|------------------|\n| Mean Absolute Error | 1.93 | 2.08 |\n| Pearson Correlation | 0.89 | 0.87 |\n| Spearman Correlation | 0.88 | 0.86 |\n| R\u00b2 (R-Squared) | 0.76 | 0.72 |",
3
- "gene_wise_cv": "| Metric | Training Value |\n|-------------------------|----------------|\n| Mean Absolute Error | 17.68 |\n| Pearson Correlation | 0.67 |\n| Spearman Correlation | 0.69 |\n| R\u00b2 (R-Squared) | -1.57 |",
4
- "diff_exp": "| Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |\n| --- | --- | --- | --- | --- | --- | --- | --- |\n| epithelial cell | 0.97 | 0.89 | 0.63 | 0.91 | 0.14 | 0.85 | 6637.00 |\n| basal cell of prostate epithelium | 0.93 | 0.75 | 0.67 | 0.94 | 0.48 | 0.89 | 3198.00 |\n| CD8-positive, alpha-beta T cell | 0.92 | 2.77 | 0.66 | 0.84 | 0.30 | 0.82 | 1081.00 |\n| endothelial cell | 0.81 | 2.90 | 0.66 | 0.83 | 0.49 | 0.85 | 471.00 |\n| mature NK T cell | 0.87 | 4.35 | 0.56 | 0.73 | 0.34 | 0.78 | 430.00 |\n| macrophage | 0.84 | 3.08 | 0.67 | 0.83 | 0.44 | 0.84 | 317.00 |\n| club cell | 0.77 | 2.25 | 0.62 | 0.79 | 0.51 | 0.80 | 290.00 |\n| smooth muscle cell | 0.84 | 3.04 | 0.66 | 0.82 | 0.49 | 0.83 | 285.00 |\n| fibroblast | 0.83 | 3.49 | 0.67 | 0.78 | 0.46 | 0.80 | 207.00 |\n| luminal cell of prostate epithelium | 0.66 | 3.96 | 0.63 | 0.71 | 0.48 | 0.76 | 60.00 |\n| erythroid progenitor cell | 0.42 | 5.41 | 0.39 | 0.36 | 0.42 | 0.95 | 52.00 |\n| monocyte | 0.61 | 4.59 | 0.73 | 0.81 | 0.21 | 0.64 | 33.00 |\n| stromal cell | 0.38 | 8.08 | 0.42 | 0.49 | 0.25 | 0.47 | 32.00 |"
5
  }
 
1
  {
2
+ "cell_wise_cv": "| Metric | Training Value | Validation Value |\n|-------------------------|----------------|------------------|\n| Mean Absolute Error | 1.94 | 2.12 |\n| Pearson Correlation | 0.89 | 0.87 |\n| Spearman Correlation | 0.88 | 0.86 |\n| R\u00b2 (R-Squared) | 0.76 | 0.71 |",
3
+ "gene_wise_cv": "| Metric | Training Value |\n|-------------------------|----------------|\n| Mean Absolute Error | 17.66 |\n| Pearson Correlation | 0.65 |\n| Spearman Correlation | 0.67 |\n| R\u00b2 (R-Squared) | -1.56 |",
4
+ "diff_exp": "| Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |\n| --- | --- | --- | --- | --- | --- | --- | --- |\n| epithelial cell | 0.96 | 0.88 | 0.64 | 0.90 | 0.13 | 0.85 | 6637.00 |\n| basal cell of prostate epithelium | 0.93 | 0.77 | 0.66 | 0.93 | 0.48 | 0.89 | 3198.00 |\n| CD8-positive, alpha-beta T cell | 0.92 | 2.89 | 0.64 | 0.83 | 0.30 | 0.82 | 1081.00 |\n| endothelial cell | 0.81 | 3.28 | 0.61 | 0.81 | 0.49 | 0.86 | 471.00 |\n| mature NK T cell | 0.87 | 4.37 | 0.56 | 0.73 | 0.35 | 0.78 | 430.00 |\n| macrophage | 0.87 | 3.15 | 0.66 | 0.83 | 0.44 | 0.84 | 317.00 |\n| club cell | 0.77 | 2.33 | 0.60 | 0.79 | 0.51 | 0.80 | 290.00 |\n| smooth muscle cell | 0.83 | 3.19 | 0.64 | 0.81 | 0.50 | 0.83 | 285.00 |\n| fibroblast | 0.85 | 3.50 | 0.67 | 0.79 | 0.47 | 0.80 | 207.00 |\n| luminal cell of prostate epithelium | 0.70 | 4.12 | 0.62 | 0.71 | 0.48 | 0.76 | 60.00 |\n| erythroid progenitor cell | 0.43 | 5.23 | 0.39 | 0.36 | 0.38 | 0.95 | 52.00 |\n| monocyte | 0.62 | 4.99 | 0.71 | 0.80 | 0.22 | 0.65 | 33.00 |\n| stromal cell | 0.32 | 7.62 | 0.47 | 0.53 | 0.23 | 0.47 | 32.00 |"
5
  }
model.pt CHANGED
@@ -1,3 +1,3 @@
1
  version https://git-lfs.github.com/spec/v1
2
- oid sha256:4b641313c61b951cc5bdde6c09de2cc86436b5792895b4deee4e340f9b0f11e3
3
  size 8281341
 
1
  version https://git-lfs.github.com/spec/v1
2
+ oid sha256:4c4e04bf44dd64472d199e0bd9b9a5bc722b6758ab25809c1805d575b63757f7
3
  size 8281341