AdritRao commited on
Commit
e6b56bf
·
verified ·
1 Parent(s): 7b255bb

Update app.py

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Files changed (1) hide show
  1. app.py +23 -17
app.py CHANGED
@@ -18,7 +18,6 @@ logo_image_path = '1.png'
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  st.image(logo_image_path, width=150)
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  st.title("Automated Abdominal Aortic Aneurysm Detection")
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- # Function to install dependencies
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  @st.cache_resource
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  def install_dependencies():
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  command = "chmod +x install.sh"
@@ -27,7 +26,6 @@ def install_dependencies():
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  command = "./install.sh"
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  subprocess.run(command, shell=True, check=True)
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- # Function to run inference
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  @st.cache_resource
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  def run_inference():
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  command = "chmod +x inference.sh"
@@ -53,7 +51,6 @@ def search_file(start_path, target_file):
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  return os.path.join(root, target_file)
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  return None
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- # Main Streamlit code
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  def main():
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  st.write("Upload a ZIP file containing DICOM slices")
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  uploaded_zip_file = st.file_uploader("Upload a .zip file", type=["zip"])
@@ -86,26 +83,35 @@ def main():
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  subdirectory_path = os.path.join(outputs_directory, first_subdirectory)
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  temp_dicom_dir_path = os.path.join(subdirectory_path, "temp_dicom_dir")
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- video_path = search_file(temp_dicom_dir_path, "aaa.mp4")
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- image_path = search_file(temp_dicom_dir_path, "diameter_graph.png")
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- largest_slice = search_file(temp_dicom_dir_path, "out.png")
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- if video_path and image_path and largest_slice:
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- zip_filename = os.path.join(temp_dir, "outputs.zip")
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- zip_and_download(temp_dicom_dir_path, zip_filename)
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- st.title("Largest Slice")
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- st.image(largest_slice, use_column_width=True)
 
 
 
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- st.title("Video")
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- st.video(video_path, format="video/mp4")
 
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- st.title("Diameter Graph")
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- st.image(image_path, use_column_width=True)
 
 
 
 
 
 
 
 
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  else:
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- st.error("Output files not found")
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  else:
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- st.warning("Ouput files not found")
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  else:
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  st.error("Output files not found")
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  except Exception as e:
 
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  st.image(logo_image_path, width=150)
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  st.title("Automated Abdominal Aortic Aneurysm Detection")
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  @st.cache_resource
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  def install_dependencies():
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  command = "chmod +x install.sh"
 
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  command = "./install.sh"
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  subprocess.run(command, shell=True, check=True)
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  @st.cache_resource
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  def run_inference():
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  command = "chmod +x inference.sh"
 
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  return os.path.join(root, target_file)
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  return None
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  def main():
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  st.write("Upload a ZIP file containing DICOM slices")
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  uploaded_zip_file = st.file_uploader("Upload a .zip file", type=["zip"])
 
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  subdirectory_path = os.path.join(outputs_directory, first_subdirectory)
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  temp_dicom_dir_path = os.path.join(subdirectory_path, "temp_dicom_dir")
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+ dicom_subdirectories = [subdir for subdir in os.listdir(temp_dicom_dir_path)
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+ if os.path.isdir(os.path.join(temp_dicom_dir_path, subdir))]
 
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+ dicom_folder = dicom_subdirectories[0] if dicom_subdirectories else None
 
 
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+ if dicom_folder:
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+ dicom_folder_path = os.path.join(temp_dicom_dir_path, dicom_folder)
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+ video_path = search_file(dicom_folder_path, "aaa.mp4")
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+ image_path = search_file(dicom_folder_path, "diameter_graph.png")
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+ largest_slice = search_file(dicom_folder_path, "out.png")
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+ if video_path and image_path and largest_slice:
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+ zip_filename = os.path.join(temp_dir, "outputs.zip")
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+ zip_and_download(dicom_folder_path, zip_filename)
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+ st.title("Largest Slice")
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+ st.image(largest_slice, use_column_width=True)
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+
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+ st.title("Video")
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+ st.video(video_path, format="video/mp4")
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+
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+ st.title("Diameter Graph")
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+ st.image(image_path, use_column_width=True)
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+ else:
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+ st.error("Output files not found")
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  else:
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+ st.error("DICOM folder not found")
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  else:
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+ st.warning("Output files not found")
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  else:
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  st.error("Output files not found")
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  except Exception as e: