Arts-of-coding commited on
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6636dd8
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1 Parent(s): f876a5d

Update dash_plotly_QC_scRNA.py

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  1. dash_plotly_QC_scRNA.py +1 -1
dash_plotly_QC_scRNA.py CHANGED
@@ -402,7 +402,7 @@ def update_graph_and_pie_chart(batch_chosen, s_chosen, g2m_chosen, condition1_ch
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  for gene in ["Cdc45", "Uhrf1", "Mcm2", "Slbp", "Mcm5", "Pola1", "Gmnn", "Cdc6", "Rrm2", "Atad2"]:
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  dff_pre = dff_pre.with_columns(pl.col(gene).cast(pl.Float64))
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- #dff_long = dff_pre.with_columns(pl.col('batch').cast(pl.Categorical)).melt(id_vars="batch", variable_name="Gene", value_name="Expression")
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  expression_means = dff_long.group_by(["Region", "Gene"]).agg(pl.mean("Expression"))
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  fig_pie = px.pie(names=labels, values=values, title=pie_title,template="seaborn")
 
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  for gene in ["Cdc45", "Uhrf1", "Mcm2", "Slbp", "Mcm5", "Pola1", "Gmnn", "Cdc6", "Rrm2", "Atad2"]:
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  dff_pre = dff_pre.with_columns(pl.col(gene).cast(pl.Float64))
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+ dff_long = dff_pre.melt(id_vars="batch", variable_name="Gene", value_name="Expression") #.with_columns(pl.col('batch').cast(pl.Categorical))
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  expression_means = dff_long.group_by(["Region", "Gene"]).agg(pl.mean("Expression"))
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  fig_pie = px.pie(names=labels, values=values, title=pie_title,template="seaborn")