fatmacankara commited on
Commit
03393e0
·
1 Parent(s): 330d33b

Update code/pdb_featureVector.py

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Files changed (1) hide show
  1. code/pdb_featureVector.py +1 -9
code/pdb_featureVector.py CHANGED
@@ -1400,15 +1400,7 @@ def pdb(input_set, mode, impute):
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  st.write('uniprotID', uniprotID)
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  pdbID = data.at[i, 'pdbID']
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  st.write('pdbID', pdbID)
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- st.write(identifier)
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- st.write(model_num)
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- st.write(pdb_path)
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- st.write(pdbSequence)
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- st.write(source)
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- st.write(chain),
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- st.write(pdbID)
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- st.write(mode)
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- st.write(path_3D_alignment)
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  alignments = get_alignments_3D(uniprotID, 'nan', pdb_path, pdbSequence, source, chain, pdbID, mode, Path(path_to_output_files / '3D_alignment'), file_format = 'gzip')
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  mutPos = data.at[i, 'mutationPositionOnPDB']
 
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  st.write('uniprotID', uniprotID)
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  pdbID = data.at[i, 'pdbID']
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  st.write('pdbID', pdbID)
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+
 
 
 
 
 
 
 
 
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  alignments = get_alignments_3D(uniprotID, 'nan', pdb_path, pdbSequence, source, chain, pdbID, mode, Path(path_to_output_files / '3D_alignment'), file_format = 'gzip')
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  mutPos = data.at[i, 'mutationPositionOnPDB']