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29882ad
1
Parent(s):
9e6da06
Update code/alphafold_featureVector.py
Browse files
code/alphafold_featureVector.py
CHANGED
@@ -717,7 +717,7 @@ def alphafold(input_set, mode, impute):
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if sasa_pos != np.NaN:
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sasa = 'nan'
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-
for filename in list(Path(path_to_output_files / 'freesasa_files').glob("*")):
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st.write('xdfkjlxdjf', filename)
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st.write('string filename')
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st.write(str(filename))
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@@ -731,9 +731,12 @@ def alphafold(input_set, mode, impute):
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st.write('IndexError')
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fname = ''
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if uniprotID == fname:
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files = open(filename, 'r')
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file = files.readlines()
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for k in file:
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if str(k.strip()[10:13]) == str(sasa_pos):
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residue = str(k[4:7].strip())
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if sasa_pos != np.NaN:
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sasa = 'nan'
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+
for filename in list(Path(path_to_output_files / 'freesasa_files').glob("*"))[1:]:
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st.write('xdfkjlxdjf', filename)
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st.write('string filename')
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st.write(str(filename))
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st.write('IndexError')
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fname = ''
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+
st.write(uniprotID , fname, uniprotID == fname)
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if uniprotID == fname:
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files = open(filename, 'r')
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+
st.write('files', files)
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file = files.readlines()
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+
st.write('readlines', file)
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for k in file:
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if str(k.strip()[10:13]) == str(sasa_pos):
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residue = str(k[4:7].strip())
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