Spaces:
Sleeping
Sleeping
Commit
·
34b153b
1
Parent(s):
be5532f
Update code/alphafold_featureVector.py
Browse files
code/alphafold_featureVector.py
CHANGED
@@ -739,8 +739,8 @@ def alphafold(input_set, mode, impute):
|
|
739 |
st.write('readlines', file)
|
740 |
for k in file:
|
741 |
st.write('HERE')
|
742 |
-
st.write('xx',
|
743 |
-
st.write(
|
744 |
if str(k.strip()[10:13]) == str(sasa_pos):
|
745 |
st.write('WHY ')
|
746 |
st.write(str(k[4:7].strip()))
|
@@ -758,7 +758,7 @@ def alphafold(input_set, mode, impute):
|
|
758 |
sasa = 'nan'
|
759 |
#sasa_val = sasa('alphafold', 'nan', uniprotID, sasa_pos, uniprot_matched.at[i, 'wt'], mode,
|
760 |
# path_to_output_files, file_type='gzip')
|
761 |
-
|
762 |
if sasa_val != None:
|
763 |
uniprot_matched.at[i, 'sasa'] = sasa_val
|
764 |
else:
|
|
|
739 |
st.write('readlines', file)
|
740 |
for k in file:
|
741 |
st.write('HERE')
|
742 |
+
st.write('xx', 'sasa_pos')
|
743 |
+
st.write(k.strip()[10:13], sasa_pos, k.strip()[10:13]== sasa_pos)
|
744 |
if str(k.strip()[10:13]) == str(sasa_pos):
|
745 |
st.write('WHY ')
|
746 |
st.write(str(k[4:7].strip()))
|
|
|
758 |
sasa = 'nan'
|
759 |
#sasa_val = sasa('alphafold', 'nan', uniprotID, sasa_pos, uniprot_matched.at[i, 'wt'], mode,
|
760 |
# path_to_output_files, file_type='gzip')
|
761 |
+
st.write('I am here', sasa_val)
|
762 |
if sasa_val != None:
|
763 |
uniprot_matched.at[i, 'sasa'] = sasa_val
|
764 |
else:
|