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3c047f4
1
Parent(s):
ac09c4e
Update code/pdb_featureVector.py
Browse files
code/pdb_featureVector.py
CHANGED
@@ -235,10 +235,12 @@ def pdb(input_set, mode, impute):
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else:
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print('PDB structure file exists..')
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for filename in list(Path(path_to_output_files / 'pdb_structures').glob("*")):
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filename_replace_ext = filename.with_suffix(".pdb")
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filename.rename(filename_replace_ext)
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file = Path(path_to_output_files / 'pdb_structures' / f'{search}.pdb')
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base = os.path.splitext(str(file))[0]
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base = '/'.join(base.split('/')[0:-1]) + '/pdb' + base.split('/')[-1]
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else:
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print('PDB structure file exists..')
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for filename in list(Path(path_to_output_files / 'pdb_structures').glob("*")):
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st.write('filename', filename)
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filename_replace_ext = filename.with_suffix(".pdb")
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filename.rename(filename_replace_ext)
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file = Path(path_to_output_files / 'pdb_structures' / f'{search}.pdb')
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st.write('file', file)
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base = os.path.splitext(str(file))[0]
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base = '/'.join(base.split('/')[0:-1]) + '/pdb' + base.split('/')[-1]
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