fatmacankara commited on
Commit
655ea6b
·
1 Parent(s): 9766a26

Update code/add_alignment.py

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Files changed (1) hide show
  1. code/add_alignment.py +3 -0
code/add_alignment.py CHANGED
@@ -8,6 +8,9 @@ from Bio.pairwise2 import format_alignment
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  def do_alignment(identifier, uniprotSequence, pdbSequence, alignment_path):
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  print(f'Aligning Datapoint: {identifier}')
 
 
 
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  if len(pdbSequence) >= 1:
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  #f = open(Path(alignment_path / f'{identifier}_alignment.txt'),"w")
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  aligner.mode = 'local'
 
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  def do_alignment(identifier, uniprotSequence, pdbSequence, alignment_path):
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  print(f'Aligning Datapoint: {identifier}')
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+ print(pdbSequence)
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+ print('uniprot Seq')
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+ print(uniprotSequence)
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  if len(pdbSequence) >= 1:
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  #f = open(Path(alignment_path / f'{identifier}_alignment.txt'),"w")
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  aligner.mode = 'local'