fatmacankara commited on
Commit
6f54921
·
1 Parent(s): 703f8ce

Update code/pdb_featureVector.py

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Files changed (1) hide show
  1. code/pdb_featureVector.py +6 -1
code/pdb_featureVector.py CHANGED
@@ -1394,7 +1394,12 @@ def pdb(input_set, mode, impute):
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  pdbID = data.at[i, 'pdbID']
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  print('Das ist pdb seq')
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  print(pdbSequence)
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- print(uniprotID, 'nan', pdb_path, pdbSequence, source, chain, pdbID, mode)
 
 
 
 
 
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  alignments = get_alignments_3D(uniprotID, 'nan', pdb_path, pdbSequence, source, chain, pdbID, mode, Path(path_to_output_files / '3D_alignment'), file_format = 'gzip')
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  mutPos = data.at[i, 'mutationPositionOnPDB']
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  try:
 
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  pdbID = data.at[i, 'pdbID']
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  print('Das ist pdb seq')
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  print(pdbSequence)
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+ print(uniprotID)
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+ print(pdb_path)
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+ print(source)
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+ print(chain)
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+ print(pdbID)
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+ print(mode)
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  alignments = get_alignments_3D(uniprotID, 'nan', pdb_path, pdbSequence, source, chain, pdbID, mode, Path(path_to_output_files / '3D_alignment'), file_format = 'gzip')
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  mutPos = data.at[i, 'mutationPositionOnPDB']
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  try: