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77b6409
1
Parent(s):
0c133ce
Update code/alphafold_featureVector.py
Browse files
code/alphafold_featureVector.py
CHANGED
@@ -367,6 +367,24 @@ def alphafold(input_set, mode, impute):
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KeyError
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info_per_model[mod][annot] = annotation_pos_on_pdb_
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#pdb_path = Path(f'{alphafold_path}/AF-{uniprotID}-F{mod}-{file_str}.pdb.gz')
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st.write('HERE1')
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pdb_path= hf_hub_download(repo_id="HuBioDataLab/AlphafoldStructures", filename=f"AF-{uniprotID}-F{mod}-model_v4.pdb.gz",repo_type = 'dataset')
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with gzip.open(pdb_path, mode="rt") as f:
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KeyError
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info_per_model[mod][annot] = annotation_pos_on_pdb_
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#pdb_path = Path(f'{alphafold_path}/AF-{uniprotID}-F{mod}-{file_str}.pdb.gz')
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st.write('-----')
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st.write('')
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mod = 1
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name = 'A0A075B6Y9'
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pdb_path = hf_hub_download(repo_id="HuBioDataLab/AlphafoldStructures", filename=f"AF-{name}-F{mod}-model_v4.pdb.gz",repo_type = 'dataset')
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st.write('PATH')
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st.write(pdb_path)
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st.write('HER')
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with gzip.open(pdb_path, mode="rt") as f:
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file_content = f.read()
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st.write(file_content)
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st.write('REH')
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st.write('-----')
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st.write('')
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st.write('HERE1')
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pdb_path= hf_hub_download(repo_id="HuBioDataLab/AlphafoldStructures", filename=f"AF-{uniprotID}-F{mod}-model_v4.pdb.gz",repo_type = 'dataset')
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with gzip.open(pdb_path, mode="rt") as f:
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