fatmacankara commited on
Commit
85e51d9
·
1 Parent(s): 3a02bd4

Update code/alphafold_featureVector.py

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Files changed (1) hide show
  1. code/alphafold_featureVector.py +1 -2
code/alphafold_featureVector.py CHANGED
@@ -368,8 +368,7 @@ def alphafold(input_set, mode, impute):
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  info_per_model[mod][annot] = annotation_pos_on_pdb_
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  #pdb_path = Path(f'{alphafold_path}/AF-{uniprotID}-F{mod}-{file_str}.pdb.gz')
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  st.write('HERE1')
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- st.write(f"AF-{uniprotID}-F{mod}-model_v4.pdb.gz")
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- pdb_path= hf_hub_download(repo_id="HuBioDataLab/AlphafoldStructures", filename=f"AF-{name}-F{mod}-model_v4.pdb.gz",repo_type = 'dataset')
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  with gzip.open(pdb_path, mode="rt") as f:
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  file_content = f.read()
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  st.write(file_content)
 
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  info_per_model[mod][annot] = annotation_pos_on_pdb_
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  #pdb_path = Path(f'{alphafold_path}/AF-{uniprotID}-F{mod}-{file_str}.pdb.gz')
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  st.write('HERE1')
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+ pdb_path= hf_hub_download(repo_id="HuBioDataLab/AlphafoldStructures", filename=f"AF-{uniprotID}-F{mod}-model_v4.pdb.gz",repo_type = 'dataset')
 
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  with gzip.open(pdb_path, mode="rt") as f:
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  file_content = f.read()
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  st.write(file_content)